| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043369
Identifier: 66043369
GI number: 66043369
Start: 109452
End: 111323
Strand: Direct
Name: 66043369
Synonym: Psyr_0098
Alternate gene names: NA
Gene position: 109452-111323 (Clockwise)
Preceding gene: 66043368
Following gene: 66043370
Centisome position: 1.8
GC content: 43.22
Gene sequence:
>1872_bases ATGGCTAGCAAAGAAACCTACTTGGGCGATGTCCAAGATGTAAACGGGACGGCGGTTAGCATTTCATTATCCAAGCAGTC ATTAACAGGTTTCATTTATATTGACGGCCAAGGATATAGGGTCGGACAGATTGGTAGTTTTGTAAGAATACCCATAGGCT TTTCTGACTTATTTGGAATTGTGAGTCAAGTAGGTGCAAGCGCTGTACCAGAAAATAAAAATATCATCAAAGATCAAAGT AATAGATGGATGAGAATCCAGCTTGTCGGTGAGGGTCAACGAAATGGTTCATTTCAACGAGGTCTATCTCAGTACCCCAC AATTGGGGATGAGGTTCATTTAGTATCCGAAAAGGAACTAAAAACAATTTATGGCCGTCCAGATCGACCATACTTCGTTA AGTTAGGTCATATCTCAAATGCTGAATCTATACCGGCCCTGATTGACATTAATAAGCTTGTCACTCGTCACTCCGCTATC GTTGGTACGACAGGATCTGGTAAGTCCACAACGGTGGCAAGCATCATGAATGCGTTGTCCGACACTGAGAAATATCCTTC TTCGCGAATTATCATGCTCGACTTACATGGGGAGTATGGTTCTGCTCTTAAAGACAAGGCTGATATCTTCAAAATAAACT CATTTAAGCTATCTAAACTCGCAGAAAGCGAGCTGCAAATACCATTCTGGGCGTTAAATTTTGATGAGCTATGCGAAATT AGTTTTGGCGAGTTCAGCAACGAGAAAGAAAAAAACGTTGTTATGGAGCGAGTTCATAAACTTAAAGCCGAGTCGATTGC TAAATATCCAAGAACTGGCGCGTCCCTTGATTCGGTTAGTGTTGACTCCCCTATTCCTTTTAGTATTCACCATCTGTGGT ACGACCTTTTCATTGAGACATTTGCAACTTACTACAAAGGCCGTCCAGGAAAACCGATGGATAATCTTGCCTTTGAACTT GACCCAGCTGGCAATGAGCTAAGAGGAAATCCCGCTGCTGGGATACCTCCAATATTCAAGAATATCGTTACCGAGGCAAA CGAGGAGAAAATCAACTATTTGCCAGGCTCATTGAACATCGGGAAAAATGTTTTGCTGCTCGGCACAAAACTTCGAATAC CTAGGTATGACTTTATATTTCGTCCCGGCGATTGGATGCCGGAAGCAGACGGTTCAGTAGTGACTGATCTAGACAAATTG CTTGAAAGCTGGATTGGCAGAAAGTCGATATCTATCTTAGATTTATCTGGCGTACCCCCAGATATATTGCAAACCACAAT AGGGGCGGTACTAAGGATACTATATGAAGCTCTTTTTTGGGCAAGAAATCTATCTCAGGGTGGCAGGCATCGTCCGTTAT TAATTGTCATGGAGGAAGCGCATATATATCTCAATGACAGTTTCAAGGGCATGGCTTCTAAAATTGTACAGCGGATAGTA AAAGAGGGACGAAAATACGGTATAGGCGCAATGATCGTCAGCCAACGTCCGTCTGAAATAGACCCTACAATTCTCTCTCA GTGCGGTACTTTTTTTGCTCTTAGATTGACTAATTCGACAGATAGAGCGCACATTACCTCTGCGCTTTCAGACAATCTGG ACGGGTTGACTAGTATGCTGCCCATCTTGAGGACAGGGGAGGCGATTATCTTAGGCGAAGCGGTAAAGCTTCCTATGAGG ACCTCTATTCTAGCTCCGCCGAAAAATCGACGACCAGATAGCCAAGATCCTATAGTTTACGATGAGTTCCCTTTCGATGA ATCTCTTTCTCCCGGTGGATGGGGAATAAAAATGGAGGGCAGTCCTAACTATGAAGAACTAGTGGAAACATGGCGAGCTC AGAACCCCCGTATTGATAAAATAAAACCTTAG
Upstream 100 bases:
>100_bases ACACATCAGGCAAGACAGAGAACATTATCAAACTTGGTGACTTCGCTGTCTTTACTAGCTTTTTGAAAAGGATAATCGGC TCAGCATCAGGGGCAAATTA
Downstream 100 bases:
>100_bases GAGTAATAATGGAACGAAGCCCGGTGTCATCTTCAAACGTAGAGTCTGTAGGCTATGACGAAGACAGTGAAACTTTAGAG GTGGAGTTTAAAAATGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 623; Mature: 622
Protein sequence:
>623_residues MASKETYLGDVQDVNGTAVSISLSKQSLTGFIYIDGQGYRVGQIGSFVRIPIGFSDLFGIVSQVGASAVPENKNIIKDQS NRWMRIQLVGEGQRNGSFQRGLSQYPTIGDEVHLVSEKELKTIYGRPDRPYFVKLGHISNAESIPALIDINKLVTRHSAI VGTTGSGKSTTVASIMNALSDTEKYPSSRIIMLDLHGEYGSALKDKADIFKINSFKLSKLAESELQIPFWALNFDELCEI SFGEFSNEKEKNVVMERVHKLKAESIAKYPRTGASLDSVSVDSPIPFSIHHLWYDLFIETFATYYKGRPGKPMDNLAFEL DPAGNELRGNPAAGIPPIFKNIVTEANEEKINYLPGSLNIGKNVLLLGTKLRIPRYDFIFRPGDWMPEADGSVVTDLDKL LESWIGRKSISILDLSGVPPDILQTTIGAVLRILYEALFWARNLSQGGRHRPLLIVMEEAHIYLNDSFKGMASKIVQRIV KEGRKYGIGAMIVSQRPSEIDPTILSQCGTFFALRLTNSTDRAHITSALSDNLDGLTSMLPILRTGEAIILGEAVKLPMR TSILAPPKNRRPDSQDPIVYDEFPFDESLSPGGWGIKMEGSPNYEELVETWRAQNPRIDKIKP
Sequences:
>Translated_623_residues MASKETYLGDVQDVNGTAVSISLSKQSLTGFIYIDGQGYRVGQIGSFVRIPIGFSDLFGIVSQVGASAVPENKNIIKDQS NRWMRIQLVGEGQRNGSFQRGLSQYPTIGDEVHLVSEKELKTIYGRPDRPYFVKLGHISNAESIPALIDINKLVTRHSAI VGTTGSGKSTTVASIMNALSDTEKYPSSRIIMLDLHGEYGSALKDKADIFKINSFKLSKLAESELQIPFWALNFDELCEI SFGEFSNEKEKNVVMERVHKLKAESIAKYPRTGASLDSVSVDSPIPFSIHHLWYDLFIETFATYYKGRPGKPMDNLAFEL DPAGNELRGNPAAGIPPIFKNIVTEANEEKINYLPGSLNIGKNVLLLGTKLRIPRYDFIFRPGDWMPEADGSVVTDLDKL LESWIGRKSISILDLSGVPPDILQTTIGAVLRILYEALFWARNLSQGGRHRPLLIVMEEAHIYLNDSFKGMASKIVQRIV KEGRKYGIGAMIVSQRPSEIDPTILSQCGTFFALRLTNSTDRAHITSALSDNLDGLTSMLPILRTGEAIILGEAVKLPMR TSILAPPKNRRPDSQDPIVYDEFPFDESLSPGGWGIKMEGSPNYEELVETWRAQNPRIDKIKP >Mature_622_residues ASKETYLGDVQDVNGTAVSISLSKQSLTGFIYIDGQGYRVGQIGSFVRIPIGFSDLFGIVSQVGASAVPENKNIIKDQSN RWMRIQLVGEGQRNGSFQRGLSQYPTIGDEVHLVSEKELKTIYGRPDRPYFVKLGHISNAESIPALIDINKLVTRHSAIV GTTGSGKSTTVASIMNALSDTEKYPSSRIIMLDLHGEYGSALKDKADIFKINSFKLSKLAESELQIPFWALNFDELCEIS FGEFSNEKEKNVVMERVHKLKAESIAKYPRTGASLDSVSVDSPIPFSIHHLWYDLFIETFATYYKGRPGKPMDNLAFELD PAGNELRGNPAAGIPPIFKNIVTEANEEKINYLPGSLNIGKNVLLLGTKLRIPRYDFIFRPGDWMPEADGSVVTDLDKLL ESWIGRKSISILDLSGVPPDILQTTIGAVLRILYEALFWARNLSQGGRHRPLLIVMEEAHIYLNDSFKGMASKIVQRIVK EGRKYGIGAMIVSQRPSEIDPTILSQCGTFFALRLTNSTDRAHITSALSDNLDGLTSMLPILRTGEAIILGEAVKLPMRT SILAPPKNRRPDSQDPIVYDEFPFDESLSPGGWGIKMEGSPNYEELVETWRAQNPRIDKIKP
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1429 and MJ1565 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 69112; Mature: 68981
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKETYLGDVQDVNGTAVSISLSKQSLTGFIYIDGQGYRVGQIGSFVRIPIGFSDLFGI CCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEECCCCCEEEECCCHHHHHHH VSQVGASAVPENKNIIKDQSNRWMRIQLVGEGQRNGSFQRGLSQYPTIGDEVHLVSEKEL HHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCEEEECHHHH KTIYGRPDRPYFVKLGHISNAESIPALIDINKLVTRHSAIVGTTGSGKSTTVASIMNALS HHHCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH DTEKYPSSRIIMLDLHGEYGSALKDKADIFKINSFKLSKLAESELQIPFWALNFDELCEI HHHHCCCCEEEEEEECCCCCCHHHCCCCEEEECCCHHHHHHHHHCCCEEEECCHHHHHCC SFGEFSNEKEKNVVMERVHKLKAESIAKYPRTGASLDSVSVDSPIPFSIHHLWYDLFIET CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH FATYYKGRPGKPMDNLAFELDPAGNELRGNPAAGIPPIFKNIVTEANEEKINYLPGSLNI HHHHHCCCCCCCHHHCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHEECCCCCCC GKNVLLLGTKLRIPRYDFIFRPGDWMPEADGSVVTDLDKLLESWIGRKSISILDLSGVPP CCEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCH DILQTTIGAVLRILYEALFWARNLSQGGRHRPLLIVMEEAHIYLNDSFKGMASKIVQRIV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHH KEGRKYGIGAMIVSQRPSEIDPTILSQCGTFFALRLTNSTDRAHITSALSDNLDGLTSML HCCHHCCCEEEEECCCCCCCCHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHH PILRTGEAIILGEAVKLPMRTSILAPPKNRRPDSQDPIVYDEFPFDESLSPGGWGIKMEG HHHHCCCEEEEECHHCCCCHHEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECC SPNYEELVETWRAQNPRIDKIKP CCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ASKETYLGDVQDVNGTAVSISLSKQSLTGFIYIDGQGYRVGQIGSFVRIPIGFSDLFGI CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEECCCCCEEEECCCHHHHHHH VSQVGASAVPENKNIIKDQSNRWMRIQLVGEGQRNGSFQRGLSQYPTIGDEVHLVSEKEL HHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCEEEECHHHH KTIYGRPDRPYFVKLGHISNAESIPALIDINKLVTRHSAIVGTTGSGKSTTVASIMNALS HHHCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH DTEKYPSSRIIMLDLHGEYGSALKDKADIFKINSFKLSKLAESELQIPFWALNFDELCEI HHHHCCCCEEEEEEECCCCCCHHHCCCCEEEECCCHHHHHHHHHCCCEEEECCHHHHHCC SFGEFSNEKEKNVVMERVHKLKAESIAKYPRTGASLDSVSVDSPIPFSIHHLWYDLFIET CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH FATYYKGRPGKPMDNLAFELDPAGNELRGNPAAGIPPIFKNIVTEANEEKINYLPGSLNI HHHHHCCCCCCCHHHCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHEECCCCCCC GKNVLLLGTKLRIPRYDFIFRPGDWMPEADGSVVTDLDKLLESWIGRKSISILDLSGVPP CCEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCH DILQTTIGAVLRILYEALFWARNLSQGGRHRPLLIVMEEAHIYLNDSFKGMASKIVQRIV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHH KEGRKYGIGAMIVSQRPSEIDPTILSQCGTFFALRLTNSTDRAHITSALSDNLDGLTSML HCCHHCCCEEEEECCCCCCCCHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHH PILRTGEAIILGEAVKLPMRTSILAPPKNRRPDSQDPIVYDEFPFDESLSPGGWGIKMEG HHHHCCCEEEEECHHCCCCHHEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECC SPNYEELVETWRAQNPRIDKIKP CCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]