| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66043368
Identifier: 66043368
GI number: 66043368
Start: 108211
End: 109452
Strand: Direct
Name: 66043368
Synonym: Psyr_0097
Alternate gene names: NA
Gene position: 108211-109452 (Clockwise)
Preceding gene: 66043365
Following gene: 66043369
Centisome position: 1.78
GC content: 39.53
Gene sequence:
>1242_bases ATGTCAGAGGAGAACGGCTACATGGAAGGCTTTCATGATCCTATTAGGCATTTAAAATATCTTCGACAATCTTTGTCACA AGATAATGAATCAATCGGCTTTTTTTTGTCTGCGGGATGTCCTCTCTCGGTAAATATGCCAACAGATGAATGGCCATTAA TTCCTGACGTAGCAAACCTTACAAAGTTTATTAACAGCCAGTTGGTGGAAAACGTTCAATATAAAACTCTTTTGGCTGAG CTGGTTAAGGCGGAACGAAACTCTGAAAACATAGAAGACACACTAAGCTTCTTAAGAAGCCTCTTAACTGTATCCAAAGG TGGAGACGTTAGAGGTTTAAGTGAGGCTAATCTTTTAGATCTTGAGAAAAAAATCTGCAAGATCATTGTTAAAAAAATTG ATGTATTACTTCCAAGTCAAGACACTCCATATCATCAGCTGTGCAAGTGGATACGATCTATAGACAGAAAAACCCCCGTC GAAATATTTACCACGAATTACGACTTGCTAATGGAACAATCACTTGAGGATCTTGAAGTTGAGTATTTCGATGGGTTCGT GGGGGCCCGTAGATCGTTTTTTGACTTGCGTGCTCTAGAAGATAATCTAATACCCGTTCATTGGTCTAGACTTTGGAAAA TTCACGGTTCAATTAACTGGTACAAGGAAGAAGTATCTGGCCAGAAGAAAGTCTATCGATCTTCGGAGATAAAGGAGGAC GCATCCCACTTGATTTATCCTTCGCACTTAAAGTATGAAGAAAGCCGAAAGATGCCTTACCTTGCTCTCATAGACCAACT AAATAGATTTATTCGTAAAAAGTCTTCATTGCTAATAATGTCAGGCTACTCGTTTAATGATGGCCACTTAAATGACACTA TAATAAACGCTTTAAAAGCAAACCCTACAGCGATGGTGCTGGCGCTGATGTATGGGAACTTCGAAGATCAACTTCCTGAC GGGTTAGCTAAAGAAAAGTACCCTGAAGCATATCGATTAGCAAAAAACCAGCACAATCTAAATATTTGGACATTCAATAA GGCTATTATTGGCACGAACCCAGGGCGGTGGTCCATATTTCCTGAAAACGACGATACTGACCTGGATATCAGAACATTCA TTACTTCTATCAAGATTGATGACACATCAGGCAAGACAGAGAACATTATCAAACTTGGTGACTTCGCTGTCTTTACTAGC TTTTTGAAAAGGATAATCGGCTCAGCATCAGGGGCAAATTAA
Upstream 100 bases:
>100_bases GTATATTTTAGCTGCCTGCTACGTTTGGCCTAAGCAGGGAATCATCAGGCGGGAAGCCAATGTTACGCCCCCTCTGAAAA TGTGAGCAGCCAAAACACTA
Downstream 100 bases:
>100_bases TGGCTAGCAAAGAAACCTACTTGGGCGATGTCCAAGATGTAAACGGGACGGCGGTTAGCATTTCATTATCCAAGCAGTCA TTAACAGGTTTCATTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSEENGYMEGFHDPIRHLKYLRQSLSQDNESIGFFLSAGCPLSVNMPTDEWPLIPDVANLTKFINSQLVENVQYKTLLAE LVKAERNSENIEDTLSFLRSLLTVSKGGDVRGLSEANLLDLEKKICKIIVKKIDVLLPSQDTPYHQLCKWIRSIDRKTPV EIFTTNYDLLMEQSLEDLEVEYFDGFVGARRSFFDLRALEDNLIPVHWSRLWKIHGSINWYKEEVSGQKKVYRSSEIKED ASHLIYPSHLKYEESRKMPYLALIDQLNRFIRKKSSLLIMSGYSFNDGHLNDTIINALKANPTAMVLALMYGNFEDQLPD GLAKEKYPEAYRLAKNQHNLNIWTFNKAIIGTNPGRWSIFPENDDTDLDIRTFITSIKIDDTSGKTENIIKLGDFAVFTS FLKRIIGSASGAN
Sequences:
>Translated_413_residues MSEENGYMEGFHDPIRHLKYLRQSLSQDNESIGFFLSAGCPLSVNMPTDEWPLIPDVANLTKFINSQLVENVQYKTLLAE LVKAERNSENIEDTLSFLRSLLTVSKGGDVRGLSEANLLDLEKKICKIIVKKIDVLLPSQDTPYHQLCKWIRSIDRKTPV EIFTTNYDLLMEQSLEDLEVEYFDGFVGARRSFFDLRALEDNLIPVHWSRLWKIHGSINWYKEEVSGQKKVYRSSEIKED ASHLIYPSHLKYEESRKMPYLALIDQLNRFIRKKSSLLIMSGYSFNDGHLNDTIINALKANPTAMVLALMYGNFEDQLPD GLAKEKYPEAYRLAKNQHNLNIWTFNKAIIGTNPGRWSIFPENDDTDLDIRTFITSIKIDDTSGKTENIIKLGDFAVFTS FLKRIIGSASGAN >Mature_412_residues SEENGYMEGFHDPIRHLKYLRQSLSQDNESIGFFLSAGCPLSVNMPTDEWPLIPDVANLTKFINSQLVENVQYKTLLAEL VKAERNSENIEDTLSFLRSLLTVSKGGDVRGLSEANLLDLEKKICKIIVKKIDVLLPSQDTPYHQLCKWIRSIDRKTPVE IFTTNYDLLMEQSLEDLEVEYFDGFVGARRSFFDLRALEDNLIPVHWSRLWKIHGSINWYKEEVSGQKKVYRSSEIKEDA SHLIYPSHLKYEESRKMPYLALIDQLNRFIRKKSSLLIMSGYSFNDGHLNDTIINALKANPTAMVLALMYGNFEDQLPDG LAKEKYPEAYRLAKNQHNLNIWTFNKAIIGTNPGRWSIFPENDDTDLDIRTFITSIKIDDTSGKTENIIKLGDFAVFTSF LKRIIGSASGAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47335; Mature: 47203
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEENGYMEGFHDPIRHLKYLRQSLSQDNESIGFFLSAGCPLSVNMPTDEWPLIPDVANL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCCCCHHHH TKFINSQLVENVQYKTLLAELVKAERNSENIEDTLSFLRSLLTVSKGGDVRGLSEANLLD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LEKKICKIIVKKIDVLLPSQDTPYHQLCKWIRSIDRKTPVEIFTTNYDLLMEQSLEDLEV HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCHHHHHH EYFDGFVGARRSFFDLRALEDNLIPVHWSRLWKIHGSINWYKEEVSGQKKVYRSSEIKED HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHEECCCCCHHHHHHHCHHHHHHHHHHHHHH ASHLIYPSHLKYEESRKMPYLALIDQLNRFIRKKSSLLIMSGYSFNDGHLNDTIINALKA HHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC NPTAMVLALMYGNFEDQLPDGLAKEKYPEAYRLAKNQHNLNIWTFNKAIIGTNPGRWSIF CHHHHHHHHHHCCCHHHCCCCHHHHCCCHHHHHHCCCCCCEEEEECCEEEECCCCCEEEC PENDDTDLDIRTFITSIKIDDTSGKTENIIKLGDFAVFTSFLKRIIGSASGAN CCCCCCCCHHHHHEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SEENGYMEGFHDPIRHLKYLRQSLSQDNESIGFFLSAGCPLSVNMPTDEWPLIPDVANL CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCCCCHHHH TKFINSQLVENVQYKTLLAELVKAERNSENIEDTLSFLRSLLTVSKGGDVRGLSEANLLD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LEKKICKIIVKKIDVLLPSQDTPYHQLCKWIRSIDRKTPVEIFTTNYDLLMEQSLEDLEV HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCHHHHHH EYFDGFVGARRSFFDLRALEDNLIPVHWSRLWKIHGSINWYKEEVSGQKKVYRSSEIKED HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHEECCCCCHHHHHHHCHHHHHHHHHHHHHH ASHLIYPSHLKYEESRKMPYLALIDQLNRFIRKKSSLLIMSGYSFNDGHLNDTIINALKA HHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC NPTAMVLALMYGNFEDQLPDGLAKEKYPEAYRLAKNQHNLNIWTFNKAIIGTNPGRWSIF CHHHHHHHHHHCCCHHHCCCCHHHHCCCHHHHHHCCCCCCEEEEECCEEEECCCCCEEEC PENDDTDLDIRTFITSIKIDDTSGKTENIIKLGDFAVFTSFLKRIIGSASGAN CCCCCCCCHHHHHEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA