Click here to switch to the map view.

The map label for this gene is 66043350

Identifier: 66043350

GI number: 66043350

Start: 85222

End: 86475

Strand: Direct

Name: 66043350

Synonym: Psyr_0079

Alternate gene names: NA

Gene position: 85222-86475 (Clockwise)

Preceding gene: 66043349

Following gene: 66043351

Centisome position: 1.4

GC content: 64.83

Gene sequence:

>1254_bases
ATGAATGCTTCGACAACAACCTGTCAGATCCTGATCGTCGGTGCCGGTGCTGCCGGTATCGCCACTGCCGCAAGCCTGCT
CGCCCGCGACGCCACCCTGCAGATCACCCTGGTCGACCCCGCCGATACCCATTATTACCAGCCCGGCTGGACCATGGTCG
GTGCGGGGATCTTCACGCCGCAGTCGACGGCGCGCAGCATGGCCTCGCTGATTCCCGAAGGCGTGCAGTGGATCAAGGCT
GCGGTGGCGACGTTCGAGCCGCAGCACAACACGCTGACGCTGGCTGACGGCCGCGTGCTCGGCTATCAGCAACTGGTGGT
CTGCCCCGGCCTGAAGCTGGACTGGTCGGCTATCGACGGGCTGGTCGACACGCTCGGGGCCAATGGCGTGACCTCCAACT
ATCGCTATGACCTGGCGCCCTACACCTGGAAGCTGGTGCAGAACCTGCAACAGGGGCGCGCGCTGTTTACCCAGCCGCCC
ATGCCGATCAAGTGCGCCGGTGCGCCGCAGAAGGCCATGTACCTGTCCTGCGATCACTGGTTGAAAAGCGGCCGTCTCGC
GCAGATCAATACGCAGTTCTACAACGCCGGTGGCGTGCTGTTCGGTGTCGCCGACTATGTGCCGGCGCTGATGAAGTACG
TCGAGCGCTACGCCATCGACCTCAAGTTCAGCCATCGGCTGGTCGCCGTCGACGGGCCTGGCAAACGCGCGACCTTCATC
CGCACGCAAGCCGATGGCAGCAGCGAGACCGTCGAGCAAAGCTTCGAAATGTTGCACGTAGTGCCGCCGCAGATTGCCCC
TGACTTCATCCGCAGCAGCCCGCTGGCCGATGCTGCGGGCTGGGTGGACGTCGACCCCGCCACGCTGAAGCACCGGCAGT
TCGCCAATGTGCATGGCCTGGGCGATGCCACCAATACCAGCAACGCCAAGACCGCCGCAGCGGCACGCAAGCAGGCGCCG
GTGGTGGCCAACAACGTATTGGTCGCGCTGGGTCGTCGGAGTGAGTCCGCGGTGTATGACGGTTACGGCTCGTGCCCGCT
GACGGTCGAGAAAGGCCGCATCGTGCTGGCCGAATTCACCTATGGCGGCAAGGTCGCGCCGAGCTTTCCGCGCTGGCTGC
TGGACGGTCGCCAGCCAACCCGACTGGCCTGGTGGCTGAAAGCGCGAGTGCTGCCCGCGCTGTACTGGCATGGCATGCTC
AAAGGCCGTGAGTGGCTGGCCAAACCGCAAAAGGCTGACACCCGGCATGGATGA

Upstream 100 bases:

>100_bases
GCGCTGCGGCCACTTTCCCGAGCCGGAAGACAACGGCGTCGTCTACCTGAAGATCCCGCTCAATGCCCTTTGACCGCTGC
CCGCCTTGGGAAACCCTGTG

Downstream 100 bases:

>100_bases
GCATCAGTTGCTGGGCGTTGGCCTGGGGACCGTCATCGGCATGGTACTGGCGCTGACCGGCGCGGGCGGCGGCATCCTCG
CCGTGCCGCTGCTGGTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; SulfideQuinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Twin-Arginine Translocation Pathway Signal; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide-Quinone Reductase; Sulfide Dehydrogenase Flavoprotein Subunit; Sulfide Quinone Oxidoreductase-Like Protein; Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase; Anti-Anti-Sigma Regulatory Factor; Filamentous Hemagglutinin; NAD(Fad)-Dependent Dehydrogenase Protein; Oxidoreductase Family Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Pyridine Nucleotide-Disulphide Oxidoreductase Class-II; Sulfide-Quinone Oxidoreductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone-Rductase; Sulphide Quinone Reductase; Oxidoreductase FAD-Dependent; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; SulfideQuinone Reductase; Flavoprotein Reductase; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Sulfide Dehydrogenase Related Protein

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MNASTTTCQILIVGAGAAGIATAASLLARDATLQITLVDPADTHYYQPGWTMVGAGIFTPQSTARSMASLIPEGVQWIKA
AVATFEPQHNTLTLADGRVLGYQQLVVCPGLKLDWSAIDGLVDTLGANGVTSNYRYDLAPYTWKLVQNLQQGRALFTQPP
MPIKCAGAPQKAMYLSCDHWLKSGRLAQINTQFYNAGGVLFGVADYVPALMKYVERYAIDLKFSHRLVAVDGPGKRATFI
RTQADGSSETVEQSFEMLHVVPPQIAPDFIRSSPLADAAGWVDVDPATLKHRQFANVHGLGDATNTSNAKTAAAARKQAP
VVANNVLVALGRRSESAVYDGYGSCPLTVEKGRIVLAEFTYGGKVAPSFPRWLLDGRQPTRLAWWLKARVLPALYWHGML
KGREWLAKPQKADTRHG

Sequences:

>Translated_417_residues
MNASTTTCQILIVGAGAAGIATAASLLARDATLQITLVDPADTHYYQPGWTMVGAGIFTPQSTARSMASLIPEGVQWIKA
AVATFEPQHNTLTLADGRVLGYQQLVVCPGLKLDWSAIDGLVDTLGANGVTSNYRYDLAPYTWKLVQNLQQGRALFTQPP
MPIKCAGAPQKAMYLSCDHWLKSGRLAQINTQFYNAGGVLFGVADYVPALMKYVERYAIDLKFSHRLVAVDGPGKRATFI
RTQADGSSETVEQSFEMLHVVPPQIAPDFIRSSPLADAAGWVDVDPATLKHRQFANVHGLGDATNTSNAKTAAAARKQAP
VVANNVLVALGRRSESAVYDGYGSCPLTVEKGRIVLAEFTYGGKVAPSFPRWLLDGRQPTRLAWWLKARVLPALYWHGML
KGREWLAKPQKADTRHG
>Mature_417_residues
MNASTTTCQILIVGAGAAGIATAASLLARDATLQITLVDPADTHYYQPGWTMVGAGIFTPQSTARSMASLIPEGVQWIKA
AVATFEPQHNTLTLADGRVLGYQQLVVCPGLKLDWSAIDGLVDTLGANGVTSNYRYDLAPYTWKLVQNLQQGRALFTQPP
MPIKCAGAPQKAMYLSCDHWLKSGRLAQINTQFYNAGGVLFGVADYVPALMKYVERYAIDLKFSHRLVAVDGPGKRATFI
RTQADGSSETVEQSFEMLHVVPPQIAPDFIRSSPLADAAGWVDVDPATLKHRQFANVHGLGDATNTSNAKTAAAARKQAP
VVANNVLVALGRRSESAVYDGYGSCPLTVEKGRIVLAEFTYGGKVAPSFPRWLLDGRQPTRLAWWLKARVLPALYWHGML
KGREWLAKPQKADTRHG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=401, Percent_Identity=37.6558603491272, Blast_Score=303, Evalue=1e-82,
Organism=Caenorhabditis elegans, GI115534373, Length=350, Percent_Identity=36.5714285714286, Blast_Score=231, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI17539680, Length=419, Percent_Identity=31.0262529832936, Blast_Score=225, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24657386, Length=405, Percent_Identity=35.8024691358025, Blast_Score=262, Evalue=3e-70,
Organism=Drosophila melanogaster, GI24657391, Length=405, Percent_Identity=35.8024691358025, Blast_Score=262, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45236; Mature: 45236

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASTTTCQILIVGAGAAGIATAASLLARDATLQITLVDPADTHYYQPGWTMVGAGIFTP
CCCCCEEEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCEEEECEECCC
QSTARSMASLIPEGVQWIKAAVATFEPQHNTLTLADGRVLGYQQLVVCPGLKLDWSAIDG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECEEEEEECCCCEECHHHHHH
LVDTLGANGVTSNYRYDLAPYTWKLVQNLQQGRALFTQPPMPIKCAGAPQKAMYLSCDHW
HHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCEEECCCCCCEEECCCCCCEEEEEHHHH
LKSGRLAQINTQFYNAGGVLFGVADYVPALMKYVERYAIDLKFSHRLVAVDGPGKRATFI
HCCCCEEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCEEEE
RTQADGSSETVEQSFEMLHVVPPQIAPDFIRSSPLADAAGWVDVDPATLKHRQFANVHGL
EEECCCCHHHHHHHHHEEEECCCCCCHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCC
GDATNTSNAKTAAAARKQAPVVANNVLVALGRRSESAVYDGYGSCPLTVEKGRIVLAEFT
CCCCCCCCCHHHHHHHHCCCEEECCEEEEECCCCCCCEECCCCCCCEEEECCEEEEEEEC
YGGKVAPSFPRWLLDGRQPTRLAWWLKARVLPALYWHGMLKGREWLAKPQKADTRHG
CCCEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNASTTTCQILIVGAGAAGIATAASLLARDATLQITLVDPADTHYYQPGWTMVGAGIFTP
CCCCCEEEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCEEEECEECCC
QSTARSMASLIPEGVQWIKAAVATFEPQHNTLTLADGRVLGYQQLVVCPGLKLDWSAIDG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECEEEEEECCCCEECHHHHHH
LVDTLGANGVTSNYRYDLAPYTWKLVQNLQQGRALFTQPPMPIKCAGAPQKAMYLSCDHW
HHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCEEECCCCCCEEECCCCCCEEEEEHHHH
LKSGRLAQINTQFYNAGGVLFGVADYVPALMKYVERYAIDLKFSHRLVAVDGPGKRATFI
HCCCCEEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCEEEE
RTQADGSSETVEQSFEMLHVVPPQIAPDFIRSSPLADAAGWVDVDPATLKHRQFANVHGL
EEECCCCHHHHHHHHHEEEECCCCCCHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCC
GDATNTSNAKTAAAARKQAPVVANNVLVALGRRSESAVYDGYGSCPLTVEKGRIVLAEFT
CCCCCCCCCHHHHHHHHCCCEEECCEEEEECCCCCCCEECCCCCCCEEEECCEEEEEEEC
YGGKVAPSFPRWLLDGRQPTRLAWWLKARVLPALYWHGMLKGREWLAKPQKADTRHG
CCCEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA