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The map label for this gene is yrdA [H]

Identifier: 66043315

GI number: 66043315

Start: 45231

End: 45776

Strand: Reverse

Name: yrdA [H]

Synonym: Psyr_0044

Alternate gene names: 66043315

Gene position: 45776-45231 (Counterclockwise)

Preceding gene: 66043318

Following gene: 66043313

Centisome position: 0.75

GC content: 62.27

Gene sequence:

>546_bases
GTGGCCATTCGCAAGTTTCAGGAGCACACCCCAGCCCTCGGCGAACGGGCCTTTGTCGATCATTCAGCGGTGGTAATCGG
TGACGTCGAAATCGGCGCCGACAGCTCCGTCTGGCCGCTGACCGTGGTGCGCGGCGACATGCACCGGATCCGCATCGGCG
CCCGCACCAGCGTGCAGGACGGCAGCGTGCTGCACATCACCCACGCCGGCCCCTTCAACCCGGACGGTTTTCCGCTGCTG
ATCGGCGATGAAGTGACCATCGGCCACAAGGCCATGCTGCACGGCTGCACAATCGGCAATCGCATCCTGGTCGGCATGGG
CACCACCATCATGGACGGCGCGGTCGTTGAAGACGAAGTGATCATCGGCGCCGGCAGCCTGGTACCGCCGGGCAAAGTGC
TGGAAAGCGGCTTTTTGTACGTCGGTCGCCCGGTCAAACAGGTGCGCGCCCTGACCGAAAAGGAAATCGCCTTCTTCCCG
TACAGCGCGACTAATTACGTGAAGCTCAAGGATCAGCATCTGGCGGAAGGGTTTGATAAGGGTTGA

Upstream 100 bases:

>100_bases
TGCCTTGAAGAAACACTCAGCCATCTTAATTACAATCGACGCCGACCGCAGCAACCAAACCCGCTCTACACGCCTATCAC
TGCCAAAGAAGGAGCCTATC

Downstream 100 bases:

>100_bases
GGCCCGCTATTAATACTGCGCTCTGCACTCAGTCGGCCTTCAATTCTGGCCGAAGGCCGTAGGAGCGAGCCGGGGCGACG
CTTCGCTTGTTCGCGAAGAC

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MAIRKFQEHTPALGERAFVDHSAVVIGDVEIGADSSVWPLTVVRGDMHRIRIGARTSVQDGSVLHITHAGPFNPDGFPLL
IGDEVTIGHKAMLHGCTIGNRILVGMGTTIMDGAVVEDEVIIGAGSLVPPGKVLESGFLYVGRPVKQVRALTEKEIAFFP
YSATNYVKLKDQHLAEGFDKG

Sequences:

>Translated_181_residues
MAIRKFQEHTPALGERAFVDHSAVVIGDVEIGADSSVWPLTVVRGDMHRIRIGARTSVQDGSVLHITHAGPFNPDGFPLL
IGDEVTIGHKAMLHGCTIGNRILVGMGTTIMDGAVVEDEVIIGAGSLVPPGKVLESGFLYVGRPVKQVRALTEKEIAFFP
YSATNYVKLKDQHLAEGFDKG
>Mature_180_residues
AIRKFQEHTPALGERAFVDHSAVVIGDVEIGADSSVWPLTVVRGDMHRIRIGARTSVQDGSVLHITHAGPFNPDGFPLLI
GDEVTIGHKAMLHGCTIGNRILVGMGTTIMDGAVVEDEVIIGAGSLVPPGKVLESGFLYVGRPVKQVRALTEKEIAFFPY
SATNYVKLKDQHLAEGFDKG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=175, Percent_Identity=59.4285714285714, Blast_Score=236, Evalue=7e-64,
Organism=Escherichia coli, GI1787667, Length=169, Percent_Identity=36.6863905325444, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87081681, Length=169, Percent_Identity=37.8698224852071, Blast_Score=103, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19441; Mature: 19309

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRKFQEHTPALGERAFVDHSAVVIGDVEIGADSSVWPLTVVRGDMHRIRIGARTSVQD
CCCCCCHHCCCCCCCEEEECCCEEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCC
GSVLHITHAGPFNPDGFPLLIGDEVTIGHKAMLHGCTIGNRILVGMGTTIMDGAVVEDEV
CCEEEEEECCCCCCCCEEEEECCCEEECCCEEEEECCCCCEEEEEECCCCCCCEEECCEE
IIGAGSLVPPGKVLESGFLYVGRPVKQVRALTEKEIAFFPYSATNYVKLKDQHLAEGFDK
EEECCCCCCCHHHHHCCCEEECCCHHHHHHHHHCCEEEECCCCCCEEEECCHHHCCCCCC
G
C
>Mature Secondary Structure 
AIRKFQEHTPALGERAFVDHSAVVIGDVEIGADSSVWPLTVVRGDMHRIRIGARTSVQD
CCCCCHHCCCCCCCEEEECCCEEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCC
GSVLHITHAGPFNPDGFPLLIGDEVTIGHKAMLHGCTIGNRILVGMGTTIMDGAVVEDEV
CCEEEEEECCCCCCCCEEEEECCCEEECCCEEEEECCCCCEEEEEECCCCCCCEEECCEE
IIGAGSLVPPGKVLESGFLYVGRPVKQVRALTEKEIAFFPYSATNYVKLKDQHLAEGFDK
EEECCCCCCCHHHHHCCCEEECCCHHHHHHHHHCCEEEECCCCCCEEEECCHHHCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]