Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66043314

Identifier: 66043314

GI number: 66043314

Start: 44004

End: 45059

Strand: Direct

Name: 66043314

Synonym: Psyr_0043

Alternate gene names: NA

Gene position: 44004-45059 (Clockwise)

Preceding gene: 66043312

Following gene: 66043316

Centisome position: 0.72

GC content: 60.89

Gene sequence:

>1056_bases
ATGGCCACATTCGCCCTGCCACGCCTTCGCCACCTGCTAGCGCTGACGGCCGTCACGCTGCTGACCGGCTGCTCCAGCGT
TTCCTACTACAGCCAGTTGGCGCAGGGTCAGTGGCAGTTGCTGCAGGCCCGTGAGCCGGTGGAGAAGATCATTGCTGACC
CGACTCGGGATGCAGGTTTGCGCAGGCATCTGGCCCAGTCACAGTTGGCGCGGGCGTTTGCCAGTGAGCATTTGCATCTG
CCGGACAACAAGAGTTACCGCCTGTATGCCGATCTGGGCCGCCCTTATGTGGTGTGGAATGTGTTCGCGACGGATGAGTT
CTCGCTGGAGCCGGTCACGCATTGTTTTCCGATTGCCGGGTGTGTCGCGTATCGCGGTTATTACAGCCCTGGCGGGGCGC
GTGGCGAGGCGGCGTTGCAGCGGCAGGCGGGCAAGGATGTGTATTTGAGTGGCGTGGAAGCCTATTCGACGCTGGGTTGG
TTCAATGATCCGATTCTCAGTTCGATGATGGGCTGGGGTGACGAGCGTCTGGCCACGCTGATTTTTCATGAATTGGCGCA
TCAGCGTTTTTATGTGAAGGACGACACGGAGTTCAACGAGTCCTACGCCAGTTTCGTCGAGCAGGAAGGTACGCGGCAAT
GGCGTGCGGCGCGGGGATTGCCGCCGGAGAGTGTTTCGCAGTCGGCACGGCGTGATCAGTTTACCCGGCTGGTGCTCGAC
ACCCGGGAGCGACTCAAGGCGCTTTATCGTCAGCCGCTGTCGGCCGAAGTGATGCGCGCGCGCAAGGCTGAGGAATTCGA
GCGGATGCGCCGTGACTACCGCGCGTTGCGGGATGAGCAGTGGGCTGGCGACAAGCGTTTCGATGCCTGGATCAACAGCC
CGATGAACAACGCTAAACTGCTGCCTTTTGGTCTTTACGATCAATGGGTGCCAGCGTTCGAGACGTTGTTCAGGCAGGAG
AATGGCGACTGGCAGGCTTTTTATCGAGCGGTGGAGAAGCTGGGCGGGATGCCTGCCGAGGCGCGCAAGGCGGCGCTGCA
GGCGTTGATGCCTTGA

Upstream 100 bases:

>100_bases
AGCGCATGTGGGCGGTTCCGGATTGTGTGAATTGAGCATAGCCTGCCACATCCGTCCGGCATAACATCACCTTCTCCACA
TAACCAAAGCCCTTCCCTTC

Downstream 100 bases:

>100_bases
AGCTCCTGTGGGAGCGAGCTTGCTCGCGAAGAGGTCGGTACAGCGCCCACACAAAGGGCGTTTGAACCGCGGTCTTCGCG
AACAAGCGAAGCGTCGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Aminopeptidase; Aminopeptidase-Like Protein; Lipoprotein

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MATFALPRLRHLLALTAVTLLTGCSSVSYYSQLAQGQWQLLQAREPVEKIIADPTRDAGLRRHLAQSQLARAFASEHLHL
PDNKSYRLYADLGRPYVVWNVFATDEFSLEPVTHCFPIAGCVAYRGYYSPGGARGEAALQRQAGKDVYLSGVEAYSTLGW
FNDPILSSMMGWGDERLATLIFHELAHQRFYVKDDTEFNESYASFVEQEGTRQWRAARGLPPESVSQSARRDQFTRLVLD
TRERLKALYRQPLSAEVMRARKAEEFERMRRDYRALRDEQWAGDKRFDAWINSPMNNAKLLPFGLYDQWVPAFETLFRQE
NGDWQAFYRAVEKLGGMPAEARKAALQALMP

Sequences:

>Translated_351_residues
MATFALPRLRHLLALTAVTLLTGCSSVSYYSQLAQGQWQLLQAREPVEKIIADPTRDAGLRRHLAQSQLARAFASEHLHL
PDNKSYRLYADLGRPYVVWNVFATDEFSLEPVTHCFPIAGCVAYRGYYSPGGARGEAALQRQAGKDVYLSGVEAYSTLGW
FNDPILSSMMGWGDERLATLIFHELAHQRFYVKDDTEFNESYASFVEQEGTRQWRAARGLPPESVSQSARRDQFTRLVLD
TRERLKALYRQPLSAEVMRARKAEEFERMRRDYRALRDEQWAGDKRFDAWINSPMNNAKLLPFGLYDQWVPAFETLFRQE
NGDWQAFYRAVEKLGGMPAEARKAALQALMP
>Mature_350_residues
ATFALPRLRHLLALTAVTLLTGCSSVSYYSQLAQGQWQLLQAREPVEKIIADPTRDAGLRRHLAQSQLARAFASEHLHLP
DNKSYRLYADLGRPYVVWNVFATDEFSLEPVTHCFPIAGCVAYRGYYSPGGARGEAALQRQAGKDVYLSGVEAYSTLGWF
NDPILSSMMGWGDERLATLIFHELAHQRFYVKDDTEFNESYASFVEQEGTRQWRAARGLPPESVSQSARRDQFTRLVLDT
RERLKALYRQPLSAEVMRARKAEEFERMRRDYRALRDEQWAGDKRFDAWINSPMNNAKLLPFGLYDQWVPAFETLFRQEN
GDWQAFYRAVEKLGGMPAEARKAALQALMP

Specific function: Unknown

COG id: COG4324

COG function: function code R; Predicted aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40204; Mature: 40073

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATFALPRLRHLLALTAVTLLTGCSSVSYYSQLAQGQWQLLQAREPVEKIIADPTRDAGL
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RRHLAQSQLARAFASEHLHLPDNKSYRLYADLGRPYVVWNVFATDEFSLEPVTHCFPIAG
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHH
CVAYRGYYSPGGARGEAALQRQAGKDVYLSGVEAYSTLGWFNDPILSSMMGWGDERLATL
HHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH
IFHELAHQRFYVKDDTEFNESYASFVEQEGTRQWRAARGLPPESVSQSARRDQFTRLVLD
HHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
TRERLKALYRQPLSAEVMRARKAEEFERMRRDYRALRDEQWAGDKRFDAWINSPMNNAKL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEE
LPFGLYDQWVPAFETLFRQENGDWQAFYRAVEKLGGMPAEARKAALQALMP
CEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ATFALPRLRHLLALTAVTLLTGCSSVSYYSQLAQGQWQLLQAREPVEKIIADPTRDAGL
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RRHLAQSQLARAFASEHLHLPDNKSYRLYADLGRPYVVWNVFATDEFSLEPVTHCFPIAG
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHH
CVAYRGYYSPGGARGEAALQRQAGKDVYLSGVEAYSTLGWFNDPILSSMMGWGDERLATL
HHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH
IFHELAHQRFYVKDDTEFNESYASFVEQEGTRQWRAARGLPPESVSQSARRDQFTRLVLD
HHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
TRERLKALYRQPLSAEVMRARKAEEFERMRRDYRALRDEQWAGDKRFDAWINSPMNNAKL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEE
LPFGLYDQWVPAFETLFRQENGDWQAFYRAVEKLGGMPAEARKAALQALMP
CEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA