| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is osmC [H]
Identifier: 66043311
GI number: 66043311
Start: 42698
End: 43129
Strand: Direct
Name: osmC [H]
Synonym: Psyr_0040
Alternate gene names: 66043311
Gene position: 42698-43129 (Clockwise)
Preceding gene: 66043309
Following gene: 66043312
Centisome position: 0.7
GC content: 55.32
Gene sequence:
>432_bases ATGAGCATCGTCAAGAAAGCATCCGCCCACTGGGAAGGTGATCTGAAAAGCGGTATCGGCAGCATCTCCACGGAAACCGG CGTATTGCGCGAAGCACCTTACGGCTTCAAGGCACGTTTTGAAGGCGGCAAAGGCACCAATCCTGAAGAATTGATCGGCG CAGCCCATGCAGGCTGTTTCTCGATGGCATTGTCCATGATTCTGGGCGGTGCAGGCCTGACTGCTGAAAGCATCGATACT CAGGCTGAAGTGTCGCTGGATCAGGTAGAAGGCGGTTTCGCGATCAGTGCTGTGCATTTGACCCTCAAGGCCAAAGTGCC AGGCGCGACCCAAGAGAAGTTCGACGAACTGACCAAGCAGGCCAAAGAAGGCTGCCCGGTCTCGAAAGTGTTGAACGCCA AGATCACCCTGGACGCTACATTGCTGAGCTGA
Upstream 100 bases:
>100_bases CTGAAACGGTAGGTCTTTCCGACGGTTGAACTTTCCAGAGCCGTCTATCCTCAGAATGCTGTAACAGCAACGATCCAAAT TCATTCCAAAAGGAGCCACC
Downstream 100 bases:
>100_bases TTCACAGCCAGCCTTGCGGGGGCGCCTTGTGCGCTCCTGTATCTGCTGTATAAAGCTGGCTTGCTTCATCGGTCATGCGT TGGTTGACGCATGGTTTGAT
Product: OsmC-like protein
Products: NA
Alternate protein names: Osmotically-inducible protein C [H]
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSIVKKASAHWEGDLKSGIGSISTETGVLREAPYGFKARFEGGKGTNPEELIGAAHAGCFSMALSMILGGAGLTAESIDT QAEVSLDQVEGGFAISAVHLTLKAKVPGATQEKFDELTKQAKEGCPVSKVLNAKITLDATLLS
Sequences:
>Translated_143_residues MSIVKKASAHWEGDLKSGIGSISTETGVLREAPYGFKARFEGGKGTNPEELIGAAHAGCFSMALSMILGGAGLTAESIDT QAEVSLDQVEGGFAISAVHLTLKAKVPGATQEKFDELTKQAKEGCPVSKVLNAKITLDATLLS >Mature_142_residues SIVKKASAHWEGDLKSGIGSISTETGVLREAPYGFKARFEGGKGTNPEELIGAAHAGCFSMALSMILGGAGLTAESIDTQ AEVSLDQVEGGFAISAVHLTLKAKVPGATQEKFDELTKQAKEGCPVSKVLNAKITLDATLLS
Specific function: Preferentially metabolizes organic hydroperoxides over inorganic hydrogen peroxide [H]
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
Organism=Escherichia coli, GI1787757, Length=143, Percent_Identity=62.2377622377622, Blast_Score=184, Evalue=2e-48,
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 - InterPro: IPR019904 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 14807; Mature: 14676
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVKKASAHWEGDLKSGIGSISTETGVLREAPYGFKARFEGGKGTNPEELIGAAHAGCF CCCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHH SMALSMILGGAGLTAESIDTQAEVSLDQVEGGFAISAVHLTLKAKVPGATQEKFDELTKQ HHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHH AKEGCPVSKVLNAKITLDATLLS HHCCCCHHHHHCCEEEEEEEECC >Mature Secondary Structure SIVKKASAHWEGDLKSGIGSISTETGVLREAPYGFKARFEGGKGTNPEELIGAAHAGCF CCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHH SMALSMILGGAGLTAESIDTQAEVSLDQVEGGFAISAVHLTLKAKVPGATQEKFDELTKQ HHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHH AKEGCPVSKVLNAKITLDATLLS HHCCCCHHHHHCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1715407; 9097039; 9278503; 9298646; 14627744 [H]