| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yqjD [C]
Identifier: 66043307
GI number: 66043307
Start: 40264
End: 40590
Strand: Reverse
Name: yqjD [C]
Synonym: Psyr_0036
Alternate gene names: 66043307
Gene position: 40590-40264 (Counterclockwise)
Preceding gene: 66043310
Following gene: 66043305
Centisome position: 0.67
GC content: 57.8
Gene sequence:
>327_bases ATGGCTACTACGTCACTTCGCAAAGCCTCGTTGCAGAGTATGGAAGCTGAAATCGAGAGCCTCCTGAAGTCCCTCGAGGG CCTGAAAGCCGACGCTACCGACGAGTCGCGCAAGACACTGAAGAATCTGAAAGCCAACGCTGAAAGCGCGCTGAGCCATT CGCGCAGCCTGCTCAGCGATGTCTACGAAGACGTCAAAGAGAAAACCCGCGAGAACGCGCTGGCAACCCGTGACTACGCT CAGGAACACCCTTGGACCACCGCTGGCGTTGCGGTAGGTGCCATCGGCCTGATCGCTGCCTACATGCTGTTCAAGCGCGG TAACTGA
Upstream 100 bases:
>100_bases CGCGCGCAAAAGTTCAGACCTTTGCAAAAATCCCATCGCACTTTCCAAAAAGCGCGGAGTCCGAAACAACACGCCCAATC ATCATTGCAGGAGAAACACC
Downstream 100 bases:
>100_bases TCAGTTTCTGATCGGTTCCCCGGACCGCTTCAGCTCATTTTTCAACCACTGAGCAAGCTGCTGCGCCCGTCCATCGGCCG CACGTCTGGGTACCCAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MATTSLRKASLQSMEAEIESLLKSLEGLKADATDESRKTLKNLKANAESALSHSRSLLSDVYEDVKEKTRENALATRDYA QEHPWTTAGVAVGAIGLIAAYMLFKRGN
Sequences:
>Translated_108_residues MATTSLRKASLQSMEAEIESLLKSLEGLKADATDESRKTLKNLKANAESALSHSRSLLSDVYEDVKEKTRENALATRDYA QEHPWTTAGVAVGAIGLIAAYMLFKRGN >Mature_107_residues ATTSLRKASLQSMEAEIESLLKSLEGLKADATDESRKTLKNLKANAESALSHSRSLLSDVYEDVKEKTRENALATRDYAQ EHPWTTAGVAVGAIGLIAAYMLFKRGN
Specific function: Unknown
COG id: COG4575
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11785; Mature: 11654
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTSLRKASLQSMEAEIESLLKSLEGLKADATDESRKTLKNLKANAESALSHSRSLLSD CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH VYEDVKEKTRENALATRDYAQEHPWTTAGVAVGAIGLIAAYMLFKRGN HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATTSLRKASLQSMEAEIESLLKSLEGLKADATDESRKTLKNLKANAESALSHSRSLLSD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH VYEDVKEKTRENALATRDYAQEHPWTTAGVAVGAIGLIAAYMLFKRGN HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA