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The map label for this gene is 66043299

Identifier: 66043299

GI number: 66043299

Start: 31768

End: 32694

Strand: Reverse

Name: 66043299

Synonym: Psyr_0028

Alternate gene names: NA

Gene position: 32694-31768 (Counterclockwise)

Preceding gene: 66043300

Following gene: 66043298

Centisome position: 0.54

GC content: 57.71

Gene sequence:

>927_bases
ATGAAGAAGTTATCCACAGCCGTTGCGGTCGCGGTCATGACCCTCGGCAGCCTTGCAGCACAGGCAGAGGACGCCAGTTG
CAGCACCGTGAAGATGGCCGATCCCGGCTGGAGTGACATTGCGGCCACCAACGCCATTACCAGCGTGGTACTCGAAGGTC
TGGGCTACACGCCCAAGGTCGATACCCTGGCCGTGCCGATCGCCTATGGCGGTTTGAAAGACGGCAAGCTGGATGTGTTT
CTGGGCAACTGGATGCCGGCGCAGCAGGGCTTCTACGACAAGTTCGTGGCCACCGGCGATGTGACGCAACTGGCGAAAAA
CCTGGAGGGCACCGAATTCACCCTGGCCGTGCCGGATTACGTCTGGGATGCCGGTGTGCATGACTTTGCCGACCTGAGCA
AATTTGCTGACAAGTTCGACAAGAAGATCTATGGCATCGGTTCTGGCGCGCCTGCCAACCTGTCTTTGCAGGAGATCATC
AAGAAGAACGAATTCGATCTGGGCAAATGGAAGCTGGTGGAATCCAGCGAAACCGCGATGCTTGCCGAGGTCAATCGCAA
CGTGAAGAAAAAGGCCTTTGTGGTGTTCCTCGGCTGGACGCCGCACCCGATGAACGTGCAGATCAAGGGCATGCACTACC
TCAAGGGCGGCGAGAAATACTTTGGTGACACCGGCTCGGTCTTTACACTGACCCGCAAAGGTTATGCTCAAGCCTGCCCG
AACGTCGGCAAGCTGCTGACCAATCTGAGCTTCACCCTGGACATGGAAAACAGCATCATGGCCGAGGTGGTCAACAAGAA
GGTCAGCAACAGCGAGGCGGCAAAGTCCTGGATCAAGGCCAACCCGACGGTGCTGGACAAGTGGCTGGAGGGCGTGAAGA
CGGTTGATGGCAAGGACGGGCTGGCAGCAGTGAAGGCGAAGTTGTAG

Upstream 100 bases:

>100_bases
GTACATGCGCAACCACATTGATCTGGACGATCTGGAGCGCAAGGCACGTTTTCCGCAACCTTGACCCTGCCCACACCAAA
AAAACCAAAGGGGTACATCA

Downstream 100 bases:

>100_bases
GCCTCGACGCTAAGTAGTGACCCGGCGTCAGGAGTTTCCACTGCGCCGGTTTTTCAGCAATTATTAGCGCTCCGAAGCGT
CATTCTGGAGTAGCAATAAG

Product: substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKKLSTAVAVAVMTLGSLAAQAEDASCSTVKMADPGWSDIAATNAITSVVLEGLGYTPKVDTLAVPIAYGGLKDGKLDVF
LGNWMPAQQGFYDKFVATGDVTQLAKNLEGTEFTLAVPDYVWDAGVHDFADLSKFADKFDKKIYGIGSGAPANLSLQEII
KKNEFDLGKWKLVESSETAMLAEVNRNVKKKAFVVFLGWTPHPMNVQIKGMHYLKGGEKYFGDTGSVFTLTRKGYAQACP
NVGKLLTNLSFTLDMENSIMAEVVNKKVSNSEAAKSWIKANPTVLDKWLEGVKTVDGKDGLAAVKAKL

Sequences:

>Translated_308_residues
MKKLSTAVAVAVMTLGSLAAQAEDASCSTVKMADPGWSDIAATNAITSVVLEGLGYTPKVDTLAVPIAYGGLKDGKLDVF
LGNWMPAQQGFYDKFVATGDVTQLAKNLEGTEFTLAVPDYVWDAGVHDFADLSKFADKFDKKIYGIGSGAPANLSLQEII
KKNEFDLGKWKLVESSETAMLAEVNRNVKKKAFVVFLGWTPHPMNVQIKGMHYLKGGEKYFGDTGSVFTLTRKGYAQACP
NVGKLLTNLSFTLDMENSIMAEVVNKKVSNSEAAKSWIKANPTVLDKWLEGVKTVDGKDGLAAVKAKL
>Mature_308_residues
MKKLSTAVAVAVMTLGSLAAQAEDASCSTVKMADPGWSDIAATNAITSVVLEGLGYTPKVDTLAVPIAYGGLKDGKLDVF
LGNWMPAQQGFYDKFVATGDVTQLAKNLEGTEFTLAVPDYVWDAGVHDFADLSKFADKFDKKIYGIGSGAPANLSLQEII
KKNEFDLGKWKLVESSETAMLAEVNRNVKKKAFVVFLGWTPHPMNVQIKGMHYLKGGEKYFGDTGSVFTLTRKGYAQACP
NVGKLLTNLSFTLDMENSIMAEVVNKKVSNSEAAKSWIKANPTVLDKWLEGVKTVDGKDGLAAVKAKL

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33203; Mature: 33203

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSTAVAVAVMTLGSLAAQAEDASCSTVKMADPGWSDIAATNAITSVVLEGLGYTPKV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
DTLAVPIAYGGLKDGKLDVFLGNWMPAQQGFYDKFVATGDVTQLAKNLEGTEFTLAVPDY
CEEEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHCCCCCEEEEECCCH
VWDAGVHDFADLSKFADKFDKKIYGIGSGAPANLSLQEIIKKNEFDLGKWKLVESSETAM
HHHCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCHH
LAEVNRNVKKKAFVVFLGWTPHPMNVQIKGMHYLKGGEKYFGDTGSVFTLTRKGYAQACP
HHHHHCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCHHCCCCCCEEEEECCCHHHHCC
NVGKLLTNLSFTLDMENSIMAEVVNKKVSNSEAAKSWIKANPTVLDKWLEGVKTVDGKDG
HHHHHHHCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
LAAVKAKL
HHHHEECC
>Mature Secondary Structure
MKKLSTAVAVAVMTLGSLAAQAEDASCSTVKMADPGWSDIAATNAITSVVLEGLGYTPKV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
DTLAVPIAYGGLKDGKLDVFLGNWMPAQQGFYDKFVATGDVTQLAKNLEGTEFTLAVPDY
CEEEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHCCCCCEEEEECCCH
VWDAGVHDFADLSKFADKFDKKIYGIGSGAPANLSLQEIIKKNEFDLGKWKLVESSETAM
HHHCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCHH
LAEVNRNVKKKAFVVFLGWTPHPMNVQIKGMHYLKGGEKYFGDTGSVFTLTRKGYAQACP
HHHHHCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCHHCCCCCCEEEEECCCHHHHCC
NVGKLLTNLSFTLDMENSIMAEVVNKKVSNSEAAKSWIKANPTVLDKWLEGVKTVDGKDG
HHHHHHHCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
LAAVKAKL
HHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]