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The map label for this gene is ydeP [H]

Identifier: 66043286

GI number: 66043286

Start: 16812

End: 19175

Strand: Reverse

Name: ydeP [H]

Synonym: Psyr_0015

Alternate gene names: 66043286

Gene position: 19175-16812 (Counterclockwise)

Preceding gene: 66043287

Following gene: 66043283

Centisome position: 0.31

GC content: 61.55

Gene sequence:

>2364_bases
ATGTCCGAATCGGAAAACTCCCAGGCCCCGCTTCAGGGATCACAGACCGACGGCACGCCGGCAGGTGGCTGGGCCGCGCT
CAGTGCGGTCAACAAGCACCTGTTGCACCAGCATGTGCTGATCAAGGGCAACCGCACGCTGATGTCCATGAACAAGCCTG
GCGGCTTCGACTGCCCCAGCTGCTCCTGGCCGGACCCGAAGAAGCCGCACACCTTTGAATACTGCGAGAACGGTGCCAAG
GCCCTGGCCTGGGAATCGACCAAGAAACGCGTGACTCCAGAGTTCTTCGCCCGGCATACGGTCAGCGAACTGGCCACCTG
GAGCGACCACGAGCTGGAAGCAGAAGGCCGTATTACCGAGCCGATGCGCTACGACGCCGCCACTGACAAATACCTGCCCG
TCACCTGGGACGAGGCGTTCGCCGAGATCGGCGAAGAACTGCGCAACCTGAGCGACCCGTGGAAGCTGGAGCTGTACACC
TCAGGGCGCACATCGAACGAAGCCGCCTTTCTGTATCAGCTGTTTGGCCGGATGTACGGCATGGCCAACTTCCCTGACTG
CTCGAACATGTGCCATGAGACCACCACCGCGGCGCTGCCCGAGTCGATCGGGGTCGGCAAAGGCACCACGACGCTGGAGG
ATTTCGAGAGCGCCGACGCGATTTTCATCATCGGCCAGAACCCCGGGACCAACAGCCCGCGCATGATGTCCGAGCTGCAC
GCCGCCGCGCGCCGGGGCGCGAGCATCATCTCGTTCAACCCGCTGCGGGAGAGGGCGCTGGTACGTTTTGCGGCGCCGCA
GGACCCGCGCGACATGCTCAGTCTGCATGGGGTGGAAATCAGCTCGCAGTACCATCAGGTCAGGATCGGCGGCGACATGA
TCGCCCTGCAAGGCGTTTGCAAGGCCGTGATCGAAGCCGACGACGTGGCGCAGCGTGAACACCTGCCACGTGTACTCGAT
GTGGCGTTCATTGAAGAACACACCCATGGCTTCGAGCAGTACGCCGATTACTGCCGACAGTTGCCCTGGGACATCATCGA
GCGCCATTCGGGCCTGACGCGTCAGGCCATCGAAGAGGTGGCGGCGGTCTATAAGCGCTCGAAGGGGGTCATCTGCTGCT
GGGGAATGGGCATCACTCAGCACAAGCGCGGCGGTGACGCCATGCAGCAGATCATCAACCTGCTGCTGTTACGCGGCAAC
ATCGGCAAGCTTGGTGCGGGGGCGTGTCCGGTGCGTGGGCATTCCAACGTACAGGGCGACAGGACGATGGGCATCTACGA
AAAGGCCGGCGAACCGTTTCTGGCCAGCATGAGCAAGGTGTTCGGTTTCGAGGCGTCCAGAAAAAAAGGTCACGCTGTGG
CCGAGACCTGCGAAGCCCTGTTGCGTGGCGAGGTGGAAGCGCTGATTTCCATGGGCGGTAATTTTTTCCGCGCCATTCCG
GACACCGATGTGATCTGCCCGACCGTCAGCCGCCTGAAAATGACGGTGCTGGTCAACACCAAGCTCAACCGCAGCGCGAC
AGTCCATGGTCAGAAGGCCTTTCTGCTGCCGTGCGTGGCACGTTCGGAGCGCGACCTGCAGAACGGTGTGGCGCAAACCA
TTACGGTGGAGGACTCGATGTCGATGGTGCACGGCTCGACCGGCATGCTTGAGCCTGCGTCGAAACATCTGATTTCCGAA
GTGGCGATCATTGCCGGTATCGCCAAAGCGACGCTTGCGCCCAATCCCAAGGTGGACTGGGACAGCTATGTGGGCGACTA
CTCAAGGATTCGCGACAAGATCGAAGAAGTACTGCCCGAGCAGTTTTATGACTTCAATCAGCGCATCCTCGAACCCGGAG
GTTTCCGCTTGCCCAATGCCGCCAGTGAGCGCAAGTGGGACACCGAGTCGGGCAAGGCCAACTTCCTCTTTCCCGAAGGT
ATCTACGACGAAGACGACACGCCGCCGGGCGCCGAGCATCTGCAGTTGATGACGATCCGTAGCCATGACCAGTTCAACAC
CACGGTGTATTCCAACGATGACCGCTATCGGGACATCTTTGGCGACCGCATGGTGGTGATGCTCAACCCGCAGGACATCG
AACGCCTGGGGCTGAAGGCCGGGGACTACATCGAGTTTCAGACGGCGCTCGACCCGACCACCGCGCGGCGTGCAGCGGGT
TTCAAGGTCATCCCCTACGACGTGCCGCAGGGTTGCTGCGCCGCGTACTACCCGGAGACCAACGGCCTGCTACCACTGGC
CAATCGGGATAAACACGGCAATACCCCTGCGGCCAAATCCATCCCGGTGAACCTGGTGCGGATGAGTTCAGAGGGTACTC
AGGTGGCGCTGGAGCGACGCGGGTTGATTGCGGCGGCCAGTTGA

Upstream 100 bases:

>100_bases
CGGCAACGCTCGTCGACTCGGGCGAATTCTCTCTGAGCCCGTGTATCTCAGACACACGAGCTTCATGCCTTCACGGGCTT
TATGAGAGAGAACACACCCC

Downstream 100 bases:

>100_bases
GGGAAACACTATCGTGCCCATGCTCCGCGTCCTATCTTGAGAACTGCGGCGCGGCGCAGATTTTTGACGCAGAGCGTCAC
GCACGGCATTCCCACGCGGT

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 787; Mature: 786

Protein sequence:

>787_residues
MSESENSQAPLQGSQTDGTPAGGWAALSAVNKHLLHQHVLIKGNRTLMSMNKPGGFDCPSCSWPDPKKPHTFEYCENGAK
ALAWESTKKRVTPEFFARHTVSELATWSDHELEAEGRITEPMRYDAATDKYLPVTWDEAFAEIGEELRNLSDPWKLELYT
SGRTSNEAAFLYQLFGRMYGMANFPDCSNMCHETTTAALPESIGVGKGTTTLEDFESADAIFIIGQNPGTNSPRMMSELH
AAARRGASIISFNPLRERALVRFAAPQDPRDMLSLHGVEISSQYHQVRIGGDMIALQGVCKAVIEADDVAQREHLPRVLD
VAFIEEHTHGFEQYADYCRQLPWDIIERHSGLTRQAIEEVAAVYKRSKGVICCWGMGITQHKRGGDAMQQIINLLLLRGN
IGKLGAGACPVRGHSNVQGDRTMGIYEKAGEPFLASMSKVFGFEASRKKGHAVAETCEALLRGEVEALISMGGNFFRAIP
DTDVICPTVSRLKMTVLVNTKLNRSATVHGQKAFLLPCVARSERDLQNGVAQTITVEDSMSMVHGSTGMLEPASKHLISE
VAIIAGIAKATLAPNPKVDWDSYVGDYSRIRDKIEEVLPEQFYDFNQRILEPGGFRLPNAASERKWDTESGKANFLFPEG
IYDEDDTPPGAEHLQLMTIRSHDQFNTTVYSNDDRYRDIFGDRMVVMLNPQDIERLGLKAGDYIEFQTALDPTTARRAAG
FKVIPYDVPQGCCAAYYPETNGLLPLANRDKHGNTPAAKSIPVNLVRMSSEGTQVALERRGLIAAAS

Sequences:

>Translated_787_residues
MSESENSQAPLQGSQTDGTPAGGWAALSAVNKHLLHQHVLIKGNRTLMSMNKPGGFDCPSCSWPDPKKPHTFEYCENGAK
ALAWESTKKRVTPEFFARHTVSELATWSDHELEAEGRITEPMRYDAATDKYLPVTWDEAFAEIGEELRNLSDPWKLELYT
SGRTSNEAAFLYQLFGRMYGMANFPDCSNMCHETTTAALPESIGVGKGTTTLEDFESADAIFIIGQNPGTNSPRMMSELH
AAARRGASIISFNPLRERALVRFAAPQDPRDMLSLHGVEISSQYHQVRIGGDMIALQGVCKAVIEADDVAQREHLPRVLD
VAFIEEHTHGFEQYADYCRQLPWDIIERHSGLTRQAIEEVAAVYKRSKGVICCWGMGITQHKRGGDAMQQIINLLLLRGN
IGKLGAGACPVRGHSNVQGDRTMGIYEKAGEPFLASMSKVFGFEASRKKGHAVAETCEALLRGEVEALISMGGNFFRAIP
DTDVICPTVSRLKMTVLVNTKLNRSATVHGQKAFLLPCVARSERDLQNGVAQTITVEDSMSMVHGSTGMLEPASKHLISE
VAIIAGIAKATLAPNPKVDWDSYVGDYSRIRDKIEEVLPEQFYDFNQRILEPGGFRLPNAASERKWDTESGKANFLFPEG
IYDEDDTPPGAEHLQLMTIRSHDQFNTTVYSNDDRYRDIFGDRMVVMLNPQDIERLGLKAGDYIEFQTALDPTTARRAAG
FKVIPYDVPQGCCAAYYPETNGLLPLANRDKHGNTPAAKSIPVNLVRMSSEGTQVALERRGLIAAAS
>Mature_786_residues
SESENSQAPLQGSQTDGTPAGGWAALSAVNKHLLHQHVLIKGNRTLMSMNKPGGFDCPSCSWPDPKKPHTFEYCENGAKA
LAWESTKKRVTPEFFARHTVSELATWSDHELEAEGRITEPMRYDAATDKYLPVTWDEAFAEIGEELRNLSDPWKLELYTS
GRTSNEAAFLYQLFGRMYGMANFPDCSNMCHETTTAALPESIGVGKGTTTLEDFESADAIFIIGQNPGTNSPRMMSELHA
AARRGASIISFNPLRERALVRFAAPQDPRDMLSLHGVEISSQYHQVRIGGDMIALQGVCKAVIEADDVAQREHLPRVLDV
AFIEEHTHGFEQYADYCRQLPWDIIERHSGLTRQAIEEVAAVYKRSKGVICCWGMGITQHKRGGDAMQQIINLLLLRGNI
GKLGAGACPVRGHSNVQGDRTMGIYEKAGEPFLASMSKVFGFEASRKKGHAVAETCEALLRGEVEALISMGGNFFRAIPD
TDVICPTVSRLKMTVLVNTKLNRSATVHGQKAFLLPCVARSERDLQNGVAQTITVEDSMSMVHGSTGMLEPASKHLISEV
AIIAGIAKATLAPNPKVDWDSYVGDYSRIRDKIEEVLPEQFYDFNQRILEPGGFRLPNAASERKWDTESGKANFLFPEGI
YDEDDTPPGAEHLQLMTIRSHDQFNTTVYSNDDRYRDIFGDRMVVMLNPQDIERLGLKAGDYIEFQTALDPTTARRAAGF
KVIPYDVPQGCCAAYYPETNGLLPLANRDKHGNTPAAKSIPVNLVRMSSEGTQVALERRGLIAAAS

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=748, Percent_Identity=50.2673796791444, Blast_Score=747, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=405, Percent_Identity=25.1851851851852, Blast_Score=141, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 86865; Mature: 86734

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESENSQAPLQGSQTDGTPAGGWAALSAVNKHLLHQHVLIKGNRTLMSMNKPGGFDCPS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCC
CSWPDPKKPHTFEYCENGAKALAWESTKKRVTPEFFARHTVSELATWSDHELEAEGRITE
CCCCCCCCCCCHHHHCCCCCEEEECCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PMRYDAATDKYLPVTWDEAFAEIGEELRNLSDPWKLELYTSGRTSNEAAFLYQLFGRMYG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
MANFPDCSNMCHETTTAALPESIGVGKGTTTLEDFESADAIFIIGQNPGTNSPRMMSELH
CCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCHHHHCCCCEEEEEECCCCCCCHHHHHHHH
AAARRGASIISFNPLRERALVRFAAPQDPRDMLSLHGVEISSQYHQVRIGGDMIALQGVC
HHHHCCCEEEEECHHHHHHHEEECCCCCHHHHHHHCCEEECCCCEEEEECCCHHHHHHHH
KAVIEADDVAQREHLPRVLDVAFIEEHTHGFEQYADYCRQLPWDIIERHSGLTRQAIEEV
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHH
AAVYKRSKGVICCWGMGITQHKRGGDAMQQIINLLLLRGNIGKLGAGACPVRGHSNVQGD
HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
RTMGIYEKAGEPFLASMSKVFGFEASRKKGHAVAETCEALLRGEVEALISMGGNFFRAIP
CCCCHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
DTDVICPTVSRLKMTVLVNTKLNRSATVHGQKAFLLPCVARSERDLQNGVAQTITVEDSM
CCCCCCCCHHHEEEEEEEECCCCCCEEECCCCEEEEHHHHCCHHHHHCCCEEEEEECCCH
SMVHGSTGMLEPASKHLISEVAIIAGIAKATLAPNPKVDWDSYVGDYSRIRDKIEEVLPE
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHH
QFYDFNQRILEPGGFRLPNAASERKWDTESGKANFLFPEGIYDEDDTPPGAEHLQLMTIR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEEEE
SHDQFNTTVYSNDDRYRDIFGDRMVVMLNPQDIERLGLKAGDYIEFQTALDPTTARRAAG
CCCCCCCEEECCCCHHHHHCCCCEEEEECCHHHHHHCCCCCCEEEEEECCCCHHHHHHCC
FKVIPYDVPQGCCAAYYPETNGLLPLANRDKHGNTPAAKSIPVNLVRMSSEGTQVALERR
CEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHC
GLIAAAS
CEEEECC
>Mature Secondary Structure 
SESENSQAPLQGSQTDGTPAGGWAALSAVNKHLLHQHVLIKGNRTLMSMNKPGGFDCPS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCC
CSWPDPKKPHTFEYCENGAKALAWESTKKRVTPEFFARHTVSELATWSDHELEAEGRITE
CCCCCCCCCCCHHHHCCCCCEEEECCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PMRYDAATDKYLPVTWDEAFAEIGEELRNLSDPWKLELYTSGRTSNEAAFLYQLFGRMYG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
MANFPDCSNMCHETTTAALPESIGVGKGTTTLEDFESADAIFIIGQNPGTNSPRMMSELH
CCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCHHHHCCCCEEEEEECCCCCCCHHHHHHHH
AAARRGASIISFNPLRERALVRFAAPQDPRDMLSLHGVEISSQYHQVRIGGDMIALQGVC
HHHHCCCEEEEECHHHHHHHEEECCCCCHHHHHHHCCEEECCCCEEEEECCCHHHHHHHH
KAVIEADDVAQREHLPRVLDVAFIEEHTHGFEQYADYCRQLPWDIIERHSGLTRQAIEEV
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHH
AAVYKRSKGVICCWGMGITQHKRGGDAMQQIINLLLLRGNIGKLGAGACPVRGHSNVQGD
HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
RTMGIYEKAGEPFLASMSKVFGFEASRKKGHAVAETCEALLRGEVEALISMGGNFFRAIP
CCCCHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
DTDVICPTVSRLKMTVLVNTKLNRSATVHGQKAFLLPCVARSERDLQNGVAQTITVEDSM
CCCCCCCCHHHEEEEEEEECCCCCCEEECCCCEEEEHHHHCCHHHHHCCCEEEEEECCCH
SMVHGSTGMLEPASKHLISEVAIIAGIAKATLAPNPKVDWDSYVGDYSRIRDKIEEVLPE
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHH
QFYDFNQRILEPGGFRLPNAASERKWDTESGKANFLFPEGIYDEDDTPPGAEHLQLMTIR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEEEE
SHDQFNTTVYSNDDRYRDIFGDRMVVMLNPQDIERLGLKAGDYIEFQTALDPTTARRAAG
CCCCCCCEEECCCCHHHHHCCCCEEEEECCHHHHHHCCCCCCEEEEEECCCCHHHHHHCC
FKVIPYDVPQGCCAAYYPETNGLLPLANRDKHGNTPAAKSIPVNLVRMSSEGTQVALERR
CEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHC
GLIAAAS
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]