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The map label for this gene is glyS [H]

Identifier: 66043282

GI number: 66043282

Start: 11916

End: 13970

Strand: Reverse

Name: glyS [H]

Synonym: Psyr_0011

Alternate gene names: 66043282

Gene position: 13970-11916 (Counterclockwise)

Preceding gene: 66043283

Following gene: 66043281

Centisome position: 0.23

GC content: 62.38

Gene sequence:

>2055_bases
ATGAGTGCTCAAGATTTTCTGGTCGAACTGGGCACCGAAGAACTGCCACCCAAGACCCTCGTCTCGCTGGCCGATGCGTT
TCTCGCCGGTATTGAAAAAGGTCTCGCAGGCGCAGGTCTGACCTACAGCGCCAAACAGGTCTACGCCGCACCGCGTCGTC
TGGCCGTGCTGATTACCGCACTGGCCACGCAACAACCGGATCGCAGCGTCAACCTCGACGGCCCACCGCGTCAGGCCGCG
TTCGATGCCGACGGCAACCCGACTCAGGCCGCCCTGGGCTTCGCCAAGAAGTGCGGCGTCGACCTGAGCGAAATCGATCA
GAGCGGTCCGAAACTGCGTTACAGCCAGACCATCCTCGGCAAGCCGACGACGTCGCTGTTGCCGACCATCGTCGAAGACT
CGCTGAACGACCTGCCGATTGCCAAGCGCATGCGCTGGGGTGCTCGCAAGGAAGAGTTCGTGCGGCCGACCCAGTGGCTG
GTGATGCTGTTCGGTGATCAGGTGGTGGACTGCACGATCCTCGCCCAGAGCGCGGGTCGTCATTCGCGCGGTCATCGCTT
CCATCATCCGCAAGACGTGCGCATTTCTTCGCCTGCCGGTTACCTCAGTGACCTGCGCGCCGCTCATGTACTGGCCGACT
TCAACGAACGTCGCCAGATCATCAGCAAACGCGTCGACGAACTGGCCACCCAGCAGGAAGGCACCGCCATCGTGCCGCCA
AGCCTGCTGGACGAAGTGGCCGGTCTGGTCGAGTGGCCGGTTCCGCTGGTGTGCTCGTTCGAAGAGCGCTTCCTGGAAGT
CCCTCAGGAAGCCTTGATTACCACCATGCAGGACAACCAGAAGTATTTCTGCCTGCTGGATGTCGACGGCAAGCTGCTGC
CGCGCTTCATCACCGTGGCCAACATCGAGAGCAAGGACCCGGCACAGATCATCGCCGGTAACGAGAAGGTGGTTCGTCCA
CGCCTGACCGACGCCGAGTTCTTCTTCAAGCAGGACAAGAAGCAGAAGCTCGAAACCTTCAACGATCGCCTGAAGAACGT
CGTGTTCCAGGCGCAGTTGGGCAGCGTGTTCGACAAGGCCGAGCGTGTGTCGAAGCTGGCCGCTTACATCGCACCGCGCA
TCGGCGGCGACGCCCAGCGTGCTGCGCGGGCCGGTCTGCTCTCCAAGTGCGACCTGTCGAGCGAGATGGTCGGCGAGTTT
CCGGAAATGCAGGGCATTGCCGGTTACTACTACGCCAAGGCCGACGGCGAGCCGGAAGATGTCGCGCTGGCGCTCAACGA
GCAGTACATGCCACGTGGCGCGGGTGCCGAACTGCCGACCACGCTGACCGGCGCTGCGGTGGCCATTGCCGACAAGCTCG
ACACGCTGGTCGGGATCTTCGGTATCGGCATGCTGCCCACCGGCAGCAAGGACCCCTATGCGCTGCGTCGTGCAGCACTG
GGCATCCTGCGTATCCTGATCGAGAAGAAGCTCGACCTGAACCTGGTCGAAACGGTGAAATTCGCCGTCGCGCAGTTCGG
CGCGAAGATCAAGCCGGCCGGTCTGGCGGAACAGGTTCTCGACTTCATCTTCGATCGTCTGCGTGCGCGTTATGAAGACG
AAGGCGTCGACGTAGCGGTGTACCTCTCGGTACGTGCCCTGCAACCGGCTTCGGCGCTGGATTTCGATCAGCGCGTCCAG
GCGGTCCAGGCCTTCCGCAAACTGCCGCAGGCCGCTGCACTGGCCGCAGTGAACAAGCGTGTATCGAACCTCTTGAGCAA
GGCCGAGGGCAGCATTGCCCAGACCGTCGAGCCCAAGTATTTCGACAACGCCAACGAGTTCTCGCTGTACTCGGCCATCC
AGCAGGCCGATCACGCGATCCAGCCTATGGCTGCCGAGCGTCAGTACAGCGAATCGCTGGCGCGTCTGGCGATGTTGCGT
GAGCCAGTCGATGCGTTCTTCGAAGCCGTGATGGTCAACGCAGAAGACGCCAACGTGCGTGCCAACCGTTATGCCCTGTT
GTCGCGTTTGCGCGGCCTGTTCCTCGGCGTCGCCGACATCTCGCTGCTGGGCTGA

Upstream 100 bases:

>100_bases
CGGTGGCTCAGGCCTACCTGCAGGCCCGGGCCCGTCTCGGCTTCCCGATGGCGCCGCCCGATCTACGCGATGAAGTGTTG
GCCAAGCTGGAGGCAGCGCA

Downstream 100 bases:

>100_bases
CAAGGAGTCGCTGTGAAACTGCTGATACTCGATCGGGATGGCGTGATCAATCATGACTCCGACACTTACATAAAGTCGGT
GGCGGAGTGGCTGCCCATTC

Product: glycyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Glycine--tRNA ligase beta subunit; GlyRS [H]

Number of amino acids: Translated: 684; Mature: 683

Protein sequence:

>684_residues
MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQQPDRSVNLDGPPRQAA
FDADGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKEEFVRPTQWL
VMLFGDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELATQQEGTAIVPP
SLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDVDGKLLPRFITVANIESKDPAQIIAGNEKVVRP
RLTDAEFFFKQDKKQKLETFNDRLKNVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLLSKCDLSSEMVGEF
PEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAAL
GILRILIEKKLDLNLVETVKFAVAQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQ
AVQAFRKLPQAAALAAVNKRVSNLLSKAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAIQPMAAERQYSESLARLAMLR
EPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADISLLG

Sequences:

>Translated_684_residues
MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQQPDRSVNLDGPPRQAA
FDADGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKEEFVRPTQWL
VMLFGDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELATQQEGTAIVPP
SLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDVDGKLLPRFITVANIESKDPAQIIAGNEKVVRP
RLTDAEFFFKQDKKQKLETFNDRLKNVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLLSKCDLSSEMVGEF
PEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAAL
GILRILIEKKLDLNLVETVKFAVAQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQ
AVQAFRKLPQAAALAAVNKRVSNLLSKAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAIQPMAAERQYSESLARLAMLR
EPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADISLLG
>Mature_683_residues
SAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQQPDRSVNLDGPPRQAAF
DADGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKEEFVRPTQWLV
MLFGDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELATQQEGTAIVPPS
LLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDVDGKLLPRFITVANIESKDPAQIIAGNEKVVRPR
LTDAEFFFKQDKKQKLETFNDRLKNVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLLSKCDLSSEMVGEFP
EMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALG
ILRILIEKKLDLNLVETVKFAVAQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA
VQAFRKLPQAAALAAVNKRVSNLLSKAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAIQPMAAERQYSESLARLAMLRE
PVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADISLLG

Specific function: Unknown

COG id: COG0751

COG function: function code J; Glycyl-tRNA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789982, Length=688, Percent_Identity=50.1453488372093, Blast_Score=635, Evalue=0.0,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 400 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008909
- InterPro:   IPR006194
- InterPro:   IPR015944
- InterPro:   IPR002311 [H]

Pfam domain/function: PF05746 DALR_1; PF02092 tRNA_synt_2f [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 74850; Mature: 74718

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILG
HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCCC
KPTTSLLPTIVEDSLNDLPIAKRMRWGARKEEFVRPTQWLVMLFGDQVVDCTILAQSAGR
CCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCHHHHHHHHHCCCHHHHHHEEHHCCC
HSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELATQQEGTAIVPP
CCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCH
SLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDVDGKLLPRFITVA
HHHHHHHHHHHCCCCCEECHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHEE
NIESKDPAQIIAGNEKVVRPRLTDAEFFFKQDKKQKLETFNDRLKNVVFQAQLGSVFDKA
CCCCCCCHHEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVSKLAAYIAPRIGGDAQRAARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPED
HHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCHHHHHCCCCCCCCCEEEEEECCCCCCC
VALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAAL
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
GILRILIEKKLDLNLVETVKFAVAQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAV
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
YLSVRALQPASALDFDQRVQAVQAFRKLPQAAALAAVNKRVSNLLSKAEGSIAQTVEPKY
EEEEECCCCCHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
FDNANEFSLYSAIQQADHAIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVR
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
ANRYALLSRLRGLFLGVADISLLG
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILG
HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCCC
KPTTSLLPTIVEDSLNDLPIAKRMRWGARKEEFVRPTQWLVMLFGDQVVDCTILAQSAGR
CCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCHHHHHHHHHCCCHHHHHHEEHHCCC
HSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELATQQEGTAIVPP
CCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCH
SLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDVDGKLLPRFITVA
HHHHHHHHHHHCCCCCEECHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHEE
NIESKDPAQIIAGNEKVVRPRLTDAEFFFKQDKKQKLETFNDRLKNVVFQAQLGSVFDKA
CCCCCCCHHEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVSKLAAYIAPRIGGDAQRAARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPED
HHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCHHHHHCCCCCCCCCEEEEEECCCCCCC
VALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAAL
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
GILRILIEKKLDLNLVETVKFAVAQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAV
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
YLSVRALQPASALDFDQRVQAVQAFRKLPQAAALAAVNKRVSNLLSKAEGSIAQTVEPKY
EEEEECCCCCHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
FDNANEFSLYSAIQQADHAIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVR
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
ANRYALLSRLRGLFLGVADISLLG
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA