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The map label for this gene is pbpG [H]

Identifier: 161486731

GI number: 161486731

Start: 2797909

End: 2798850

Strand: Reverse

Name: pbpG [H]

Synonym: Psyr_2414

Alternate gene names: 161486731

Gene position: 2798850-2797909 (Counterclockwise)

Preceding gene: 66045652

Following gene: 66045648

Centisome position: 45.93

GC content: 57.75

Gene sequence:

>942_bases
TTGCTCTTGAAAATCCGTCTGTCTCTTTTGGGCCTATTATTTGTACTTACCGGCCCCATGCTTTCTACCCCTACGCTGGC
AAACGAACCTGCCGTCCTGAGCCGTGATCCTTCCAACCTGCACCTTGCCTCGGGCAGCGCAATGGTCATCGACCTGCAGA
CCGACAAGGTGCTGTATTCCAGCAACCCGGATGTGATCGTGCCGATTGCCTCGGTCACCAAGCTGATGACCGCGATGGTC
GTGCTGGATGCCAAGCAGCCGATGGACGAAGTCATTCCGGTGAACATTTCCCAGACACCGGAAATGAAAGGTGTTTTCTC
CCGCGTTAAACTCGGCAGTGAAATGAACCGCCGGGACATGCTGCTGATCACCCTGATGTCCTCGGAAAACCGCGCGGCGG
CCAGCCTGGCGCACAGCTATCCGGGTGGCTATCCGGCGTTCATTCTGGCGATGAACGCCAAAGCCAAGGCGCTGGGCATG
AAACACACGGCCTACGTCGAACCCACTGGCCTGTCGGTGTACAACGTGTCGACCGCACGCGACCTCACCAAGCTGGTGAT
GGCGGCGCGCAAATACCCGCTGCTCAGTGAACTGAGCACCACCGAGCAGAAGACTGTGACGTTCCGCAAACCGACCTACA
CCCTCGGTTTCAGCAACACTGATCATCTGGTGCGCAAGGACAACTGGGACATCAAGTTGACCAAGACCGGCTTTACCAAT
CAGGCCGGTCACTGCCTGGTGCTGCTGACCAGCATGGCCAACCGCCCGGTTTCAGTGGTGATTCTCGATGCGTTCGGCAA
ATACACGCACTTCGCCGATGCCAGCCGCATACGCAAATGGATGGAGACCGGCCAGAGCGGCCCGGCCCCCGAAGTGGCCC
TGCAGTACAAGAAGGAAAAGAATCTGGTCATGAGACAGACCGGTATTCAAGCCAGAGACTGA

Upstream 100 bases:

>100_bases
AAACGCCCACCCCAGCCCATCGACATACGGCAAAGTCTGCTCATAAAATGCAGCGTTTTGACGCGATCCCTTCCATTTAC
CACCTTTTATCGAGTGAGCC

Downstream 100 bases:

>100_bases
GTCACACAGGCAACGAAAAACGGTCGCGATGCTTGCACATCGCGACCGTTTTTATTTACCCGAGCAACGCTCAGTTGTAT
TGAGTGACCAGCTTGGTATT

Product: D-alanyl-D-alanine endopeptidase

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 7; PBP-7 [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLLKIRLSLLGLLFVLTGPMLSTPTLANEPAVLSRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAMV
VLDAKQPMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKALGM
KHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTN
QAGHCLVLLTSMANRPVSVVILDAFGKYTHFADASRIRKWMETGQSGPAPEVALQYKKEKNLVMRQTGIQARD

Sequences:

>Translated_313_residues
MLLKIRLSLLGLLFVLTGPMLSTPTLANEPAVLSRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAMV
VLDAKQPMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKALGM
KHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTN
QAGHCLVLLTSMANRPVSVVILDAFGKYTHFADASRIRKWMETGQSGPAPEVALQYKKEKNLVMRQTGIQARD
>Mature_313_residues
MLLKIRLSLLGLLFVLTGPMLSTPTLANEPAVLSRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAMV
VLDAKQPMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKALGM
KHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTN
QAGHCLVLLTSMANRPVSVVILDAFGKYTHFADASRIRKWMETGQSGPAPEVALQYKKEKNLVMRQTGIQARD

Specific function: Cell wall formation. May play a specialized role in remodeling the cell wall. Specifically hydrolyze the DD- diaminopimelate-alanine bonds in high-molecular-mass murein sacculi [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=293, Percent_Identity=62.7986348122867, Blast_Score=387, Evalue=1e-109,
Organism=Escherichia coli, GI1787062, Length=248, Percent_Identity=27.8225806451613, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 34374; Mature: 34374

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKIRLSLLGLLFVLTGPMLSTPTLANEPAVLSRDPSNLHLASGSAMVIDLQTDKVLYS
CEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEEEECCEEEEC
SNPDVIVPIASVTKLMTAMVVLDAKQPMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDM
CCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCCCHHHHHHHHHCCCCCCCCCE
LLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTAR
EEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCEEEEECCCCCEEEECHHHH
DLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTN
HHHHHHHHHHCCCCHHHHCCCCHHEEEEECCEEEECCCCCCCEEECCCCCEEEEECCCCC
QAGHCLVLLTSMANRPVSVVILDAFGKYTHFADASRIRKWMETGQSGPAPEVALQYKKEK
CCCCEEEEEEHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEEEHHHC
NLVMRQTGIQARD
CEEEECCCCCCCC
>Mature Secondary Structure
MLLKIRLSLLGLLFVLTGPMLSTPTLANEPAVLSRDPSNLHLASGSAMVIDLQTDKVLYS
CEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEEEECCEEEEC
SNPDVIVPIASVTKLMTAMVVLDAKQPMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDM
CCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCCCHHHHHHHHHCCCCCCCCCE
LLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTAR
EEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCEEEEECCCCCEEEECHHHH
DLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTN
HHHHHHHHHHCCCCHHHHCCCCHHEEEEECCEEEECCCCCCCEEECCCCCEEEEECCCCC
QAGHCLVLLTSMANRPVSVVILDAFGKYTHFADASRIRKWMETGQSGPAPEVALQYKKEK
CCCCEEEEEEHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEEEHHHC
NLVMRQTGIQARD
CEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 6386470; 7721700; 7925376 [H]