| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is proP [H]
Identifier: 62391912
GI number: 62391912
Start: 3245868
End: 3247382
Strand: Reverse
Name: proP [H]
Synonym: cg3395
Alternate gene names: 62391912
Gene position: 3247382-3245868 (Counterclockwise)
Preceding gene: 62391913
Following gene: 62391904
Centisome position: 98.92
GC content: 53.86
Gene sequence:
>1515_bases GTGAGCCCGATTCGCTCAAAAAAGAAAATCAAGAACGAACCAAGACTAACAGTCGATGACGTCAACGTTGTTCCCCCAAA GAAGATCCGTCCGGCCATTAAAGGCACTGTGGTGGGTAACTTCATGGAGTGGTACGACTTCGGAATTTATGGTTATTTGA CGGTCACGATGACCGCAGTATTTACCCAAGGCCTGCCGCAAGAATGGCAGTTGTTGGCCGTGATGTTTGGTTTCGCGGTG TCTTATTTAGTTCGCCCGCTTGGTGGCCTGGTTCTGGGTCCGCTTGGCGATAAGGTTGGCCGCCAGAAGGTTTTGTACGT AACCATGGCCATGATGGCCGTGTCTACGGCGCTGATTGGCTTGCTGCCGACGGCGGCGTCGATAGGCGCTTGGGCTTTGG TGCTTTTGTACCTGTTGAAGATGGTGCAGGGATTTTCGACTGGTGGTGAATATGCTGGTGCGACCACCTATGTTGCTGAG TTTGCGCCGGATCGTCGACGAGGTTTCTTCGGAGCTTTCCTAGATATGGGTTCCTACCTGGGCTTTGCCGCGGGTGCTTC GGTCGTGGCGATTACTACCTGGGTGACCACTCACTTCTATGGCGCAACTGCCATGGAGGATTTCGGTTGGCGTATTCCTT TCCTGACTGCGATCCCGCTGGGCATCATTGCGGTGTACCTGCGTACTCGTATCCCTGAGACCCCTGCGTTTGAGAACAAC CAAGACGAGCCAAATGCAGTTGTTGAAAAGGACACTGAAGATCCTTATGCACGCCTGGGCCTGGCTGGTGTTATCCGCCA CCACTGGCGTCCACTGCTGATTGGTATTGCGATTGTGGCAGCGACCAACACCGCCGGTTACGCGCTAACCAGTTACATGC CTGTGTATCTAGAGGAGCAGATCGGTCTGCACTCCGCATCCGCTGCCGCTGTGACCGTGCCGATTCTGGTTGTTATGTCC CTGCTGCTGCCATTTGTTGGTATGTGGAGTGACCGCGTGGGCCGCAAGCCTGTCTACGCGACTGCTGTTGCGGCAACGCT GATCTTGATGGTTCCTGCCTTCTTGATCATGAACACCGGAACCATCGGCGCCGTACTGATTGCACTGTCCATGGTTGCTA TTCCAACCGGTTTGTATGTGGCACTGTCCGCATCTGCCCTGCCAGCGCTGTTCCCAACCGCGTCACGATTCTCTGGAATG GGTATTTCCTACAACATTTCCGTGTCGTTGTTCGGTGGTACAACCCCGCTGATCACCCAGTTCCTGCTGCAGAAGACTGG CCTGGATATCGTTCCAGCGCTCTACATCATGTTCTTCTCTGCAATCGCAGGTGTGGCGCTGCTGTTCATGACCGAGTCTT CACAGAAGCCACTGCTTGGCTCATTCCCAACCGTGGAAACCAAGTCTGAGGCCGTGGAGATCGTGAAGAACCAGGACGAG GATCCAAATATTGATCTTTCCCATATGCCGTTTCCTGATGAGGAAAACGTAGGTGCTGAAAAGCAAAACGCATAA
Upstream 100 bases:
>100_bases CAGGAAGAAGTTAACACCGCCCAGGGGTGCGTTGGATGATGATCATCTACAAACAAACATTCCGTTATGCACTCATAAGA TATGACGAGAGGTTTTACTC
Downstream 100 bases:
>100_bases CCGTAAAGCCCGCTGCAAGGCGGGCTTTTTTGGTGGCCGGGGGAGTCGAAAAGTGCTTATCGACGAGTGCTGCGTCGGTT TATGAGATGCTTTTGTAGTC
Product: proline/ectoine carrier
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MSPIRSKKKIKNEPRLTVDDVNVVPPKKIRPAIKGTVVGNFMEWYDFGIYGYLTVTMTAVFTQGLPQEWQLLAVMFGFAV SYLVRPLGGLVLGPLGDKVGRQKVLYVTMAMMAVSTALIGLLPTAASIGAWALVLLYLLKMVQGFSTGGEYAGATTYVAE FAPDRRRGFFGAFLDMGSYLGFAAGASVVAITTWVTTHFYGATAMEDFGWRIPFLTAIPLGIIAVYLRTRIPETPAFENN QDEPNAVVEKDTEDPYARLGLAGVIRHHWRPLLIGIAIVAATNTAGYALTSYMPVYLEEQIGLHSASAAAVTVPILVVMS LLLPFVGMWSDRVGRKPVYATAVAATLILMVPAFLIMNTGTIGAVLIALSMVAIPTGLYVALSASALPALFPTASRFSGM GISYNISVSLFGGTTPLITQFLLQKTGLDIVPALYIMFFSAIAGVALLFMTESSQKPLLGSFPTVETKSEAVEIVKNQDE DPNIDLSHMPFPDEENVGAEKQNA
Sequences:
>Translated_504_residues MSPIRSKKKIKNEPRLTVDDVNVVPPKKIRPAIKGTVVGNFMEWYDFGIYGYLTVTMTAVFTQGLPQEWQLLAVMFGFAV SYLVRPLGGLVLGPLGDKVGRQKVLYVTMAMMAVSTALIGLLPTAASIGAWALVLLYLLKMVQGFSTGGEYAGATTYVAE FAPDRRRGFFGAFLDMGSYLGFAAGASVVAITTWVTTHFYGATAMEDFGWRIPFLTAIPLGIIAVYLRTRIPETPAFENN QDEPNAVVEKDTEDPYARLGLAGVIRHHWRPLLIGIAIVAATNTAGYALTSYMPVYLEEQIGLHSASAAAVTVPILVVMS LLLPFVGMWSDRVGRKPVYATAVAATLILMVPAFLIMNTGTIGAVLIALSMVAIPTGLYVALSASALPALFPTASRFSGM GISYNISVSLFGGTTPLITQFLLQKTGLDIVPALYIMFFSAIAGVALLFMTESSQKPLLGSFPTVETKSEAVEIVKNQDE DPNIDLSHMPFPDEENVGAEKQNA >Mature_503_residues SPIRSKKKIKNEPRLTVDDVNVVPPKKIRPAIKGTVVGNFMEWYDFGIYGYLTVTMTAVFTQGLPQEWQLLAVMFGFAVS YLVRPLGGLVLGPLGDKVGRQKVLYVTMAMMAVSTALIGLLPTAASIGAWALVLLYLLKMVQGFSTGGEYAGATTYVAEF APDRRRGFFGAFLDMGSYLGFAAGASVVAITTWVTTHFYGATAMEDFGWRIPFLTAIPLGIIAVYLRTRIPETPAFENNQ DEPNAVVEKDTEDPYARLGLAGVIRHHWRPLLIGIAIVAATNTAGYALTSYMPVYLEEQIGLHSASAAAVTVPILVVMSL LLPFVGMWSDRVGRKPVYATAVAATLILMVPAFLIMNTGTIGAVLIALSMVAIPTGLYVALSASALPALFPTASRFSGMG ISYNISVSLFGGTTPLITQFLLQKTGLDIVPALYIMFFSAIAGVALLFMTESSQKPLLGSFPTVETKSEAVEIVKNQDED PNIDLSHMPFPDEENVGAEKQNA
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=486, Percent_Identity=38.8888888888889, Blast_Score=357, Evalue=1e-100, Organism=Escherichia coli, GI1788942, Length=443, Percent_Identity=28.6681715575621, Blast_Score=183, Evalue=2e-47, Organism=Escherichia coli, GI1788292, Length=445, Percent_Identity=28.7640449438202, Blast_Score=172, Evalue=6e-44, Organism=Escherichia coli, GI1789941, Length=452, Percent_Identity=28.7610619469027, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI87082404, Length=368, Percent_Identity=23.0978260869565, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082231, Length=410, Percent_Identity=23.1707317073171, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 54276; Mature: 54145
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIRSKKKIKNEPRLTVDDVNVVPPKKIRPAIKGTVVGNFMEWYDFGIYGYLTVTMTAV CCCCCCHHHHCCCCCEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FTQGLPQEWQLLAVMFGFAVSYLVRPLGGLVLGPLGDKVGRQKVLYVTMAMMAVSTALIG HHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCHHHHHHHHHHHHHHHHHHH LLPTAASIGAWALVLLYLLKMVQGFSTGGEYAGATTYVAEFAPDRRRGFFGAFLDMGSYL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH GFAAGASVVAITTWVTTHFYGATAMEDFGWRIPFLTAIPLGIIAVYLRTRIPETPAFENN HHHCCCCCEEHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC QDEPNAVVEKDTEDPYARLGLAGVIRHHWRPLLIGIAIVAATNTAGYALTSYMPVYLEEQ CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH IGLHSASAAAVTVPILVVMSLLLPFVGMWSDRVGRKPVYATAVAATLILMVPAFLIMNTG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC TIGAVLIALSMVAIPTGLYVALSASALPALFPTASRFSGMGISYNISVSLFGGTTPLITQ HHHHHHHHHHHHHHCCCHHEEEEHHHHHHHCCCHHHHCCCCEEEEEEEEEECCCHHHHHH FLLQKTGLDIVPALYIMFFSAIAGVALLFMTESSQKPLLGSFPTVETKSEAVEIVKNQDE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHCCCC DPNIDLSHMPFPDEENVGAEKQNA CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPIRSKKKIKNEPRLTVDDVNVVPPKKIRPAIKGTVVGNFMEWYDFGIYGYLTVTMTAV CCCCCHHHHCCCCCEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FTQGLPQEWQLLAVMFGFAVSYLVRPLGGLVLGPLGDKVGRQKVLYVTMAMMAVSTALIG HHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCHHHHHHHHHHHHHHHHHHH LLPTAASIGAWALVLLYLLKMVQGFSTGGEYAGATTYVAEFAPDRRRGFFGAFLDMGSYL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH GFAAGASVVAITTWVTTHFYGATAMEDFGWRIPFLTAIPLGIIAVYLRTRIPETPAFENN HHHCCCCCEEHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC QDEPNAVVEKDTEDPYARLGLAGVIRHHWRPLLIGIAIVAATNTAGYALTSYMPVYLEEQ CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH IGLHSASAAAVTVPILVVMSLLLPFVGMWSDRVGRKPVYATAVAATLILMVPAFLIMNTG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC TIGAVLIALSMVAIPTGLYVALSASALPALFPTASRFSGMGISYNISVSLFGGTTPLITQ HHHHHHHHHHHHHHCCCHHEEEEHHHHHHHCCCHHHHCCCCEEEEEEEEEECCCHHHHHH FLLQKTGLDIVPALYIMFFSAIAGVALLFMTESSQKPLLGSFPTVETKSEAVEIVKNQDE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHCCCC DPNIDLSHMPFPDEENVGAEKQNA CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]