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The map label for this gene is yagI [H]

Identifier: 62391872

GI number: 62391872

Start: 3200215

End: 3200991

Strand: Reverse

Name: yagI [H]

Synonym: cg3352

Alternate gene names: 62391872

Gene position: 3200991-3200215 (Counterclockwise)

Preceding gene: 62391875

Following gene: 62391871

Centisome position: 97.51

GC content: 54.18

Gene sequence:

>777_bases
ATGGATAACGTCGCCCCCACCCAGGGGTTACCCCCGAAAGAATTTCTAAGCTCTGTCGACATTGCATTGCAGCTCATTTT
GCTGCTCCGTGACTCTGGAAGTTTGACCATTTCCGGTGCCGCCGAAACCCTTGGGGTGGGCGCGTCTACGATCCATCGAT
CCATGTCAATGCTGGTCTACCGGGGTTTTGCAGTCAGAAGCGAGTCCCGCACCTACCTTCCAGGCTCTGCATTGGCGACC
TCCGCGCTGCAGCCAGGCCTTGGCGCTGACTTGACGAAAAAATGCAGCCACTACATGGAATCAATCGGCAAGGAAACTGG
CGAAACAACCCACTTGGTGATTCTGCAGGGAGATAGCGTTCACTTTATTCACAGTGTTGAAGGTTCCCTGCCGGTGCGCG
TGGGCAATCGCCGAGGTCAAGTCATGCCCGCCATCCAAAATTCAGGTGGATTAGTGATGCTTGCAGAGATGTCAGCCCGG
GAGCTTCGGGCACTGTATTCCAGCCTGGGCGATGAGGAATTTGAGAATTTAAGAAAGCGTCTTCGCAGGACCCGGGATCG
AGGCCATGGCGCAAACTTTGGCTTCTTTGAGCAGGACGTTAGTGCAGTTGCGGAGCCTTTACTCAACGATGTGGGTGATG
TTTTAGGTGCAATTACAGTGGCTGTGCCGTCGAATCGGTTCCGGGAGGTCTATCCGAAGGCGGTGCAGGTTTTGGAACGA
CATATGCGGGATCTGAACAAGGCTTTAGCTGATTACCGAGTGCCCGAAAAAGGGTGA

Upstream 100 bases:

>100_bases
CACAAGTCCTCCCGATTCTGGTGCGTGTGATGTCATAAACACATAATCGAGGTGAGCCAAGTTACAATCAAAGGGATTCC
GCTATCTGGAAAGAGTGATT

Downstream 100 bases:

>100_bases
ATGGGGGGAATTTTCAGAGCTGTCACACCCCCGTTTCCTGAGGGGAATACTTAGATTCCACATAGCGGAATTATCTTGAG
TCACCTTTCAAAGCCCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MDNVAPTQGLPPKEFLSSVDIALQLILLLRDSGSLTISGAAETLGVGASTIHRSMSMLVYRGFAVRSESRTYLPGSALAT
SALQPGLGADLTKKCSHYMESIGKETGETTHLVILQGDSVHFIHSVEGSLPVRVGNRRGQVMPAIQNSGGLVMLAEMSAR
ELRALYSSLGDEEFENLRKRLRRTRDRGHGANFGFFEQDVSAVAEPLLNDVGDVLGAITVAVPSNRFREVYPKAVQVLER
HMRDLNKALADYRVPEKG

Sequences:

>Translated_258_residues
MDNVAPTQGLPPKEFLSSVDIALQLILLLRDSGSLTISGAAETLGVGASTIHRSMSMLVYRGFAVRSESRTYLPGSALAT
SALQPGLGADLTKKCSHYMESIGKETGETTHLVILQGDSVHFIHSVEGSLPVRVGNRRGQVMPAIQNSGGLVMLAEMSAR
ELRALYSSLGDEEFENLRKRLRRTRDRGHGANFGFFEQDVSAVAEPLLNDVGDVLGAITVAVPSNRFREVYPKAVQVLER
HMRDLNKALADYRVPEKG
>Mature_258_residues
MDNVAPTQGLPPKEFLSSVDIALQLILLLRDSGSLTISGAAETLGVGASTIHRSMSMLVYRGFAVRSESRTYLPGSALAT
SALQPGLGADLTKKCSHYMESIGKETGETTHLVILQGDSVHFIHSVEGSLPVRVGNRRGQVMPAIQNSGGLVMLAEMSAR
ELRALYSSLGDEEFENLRKRLRRTRDRGHGANFGFFEQDVSAVAEPLLNDVGDVLGAITVAVPSNRFREVYPKAVQVLER
HMRDLNKALADYRVPEKG

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1786468, Length=246, Percent_Identity=26.8292682926829, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788131, Length=229, Percent_Identity=24.0174672489083, Blast_Score=60, Evalue=1e-10,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 28031; Mature: 28031

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNVAPTQGLPPKEFLSSVDIALQLILLLRDSGSLTISGAAETLGVGASTIHRSMSMLVY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCHHHHHHHHHHHHH
RGFAVRSESRTYLPGSALATSALQPGLGADLTKKCSHYMESIGKETGETTHLVILQGDSV
HHHHEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCE
HFIHSVEGSLPVRVGNRRGQVMPAIQNSGGLVMLAEMSARELRALYSSLGDEEFENLRKR
EEEEECCCCCCEEECCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHH
LRRTRDRGHGANFGFFEQDVSAVAEPLLNDVGDVLGAITVAVPSNRFREVYPKAVQVLER
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HMRDLNKALADYRVPEKG
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDNVAPTQGLPPKEFLSSVDIALQLILLLRDSGSLTISGAAETLGVGASTIHRSMSMLVY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCHHHHHHHHHHHHH
RGFAVRSESRTYLPGSALATSALQPGLGADLTKKCSHYMESIGKETGETTHLVILQGDSV
HHHHEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCE
HFIHSVEGSLPVRVGNRRGQVMPAIQNSGGLVMLAEMSARELRALYSSLGDEEFENLRKR
EEEEECCCCCCEEECCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHH
LRRTRDRGHGANFGFFEQDVSAVAEPLLNDVGDVLGAITVAVPSNRFREVYPKAVQVLER
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HMRDLNKALADYRVPEKG
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]