Click here to switch to the map view.

The map label for this gene is 62391833

Identifier: 62391833

GI number: 62391833

Start: 3158840

End: 3160300

Strand: Reverse

Name: 62391833

Synonym: cg3312

Alternate gene names: NA

Gene position: 3160300-3158840 (Counterclockwise)

Preceding gene: 62391834

Following gene: 62391832

Centisome position: 96.27

GC content: 54.0

Gene sequence:

>1461_bases
ATGGACCAGAAATTGGACCAGCAGAAGGTAGACCGCGTATCGCCCGGTGATAGTGAACCGGTGGCACGGGATTTTATCAA
TGCAATCGGCGGTCGGTTTGGTCGTTTTGCGCAGGTGGGCACTCAGCGGTTCTGGACTCCCCTGCGTGTTTTGATCACCA
CTTCCCTGGTGTTTTTGGCCATGGGGTTTTTAACAAAAGCCAATTGCATCCAGGGTTCTAGAGGTACTGATGGTGTGGTT
TCTTTGAACTGGTCGGGAAGTCGCCAGTACACCTCAGCCTGTTACAACGACATCGTTCCGCTCTATGGGGGGCGCGGAAT
TGATGCGCCAGGTTTCCCTTATGCCTTTTCGTGGCAGGAAGGTGATCTCACCAGGTACATGGAGTACCCGGTGTTGGGCG
GAATTTTCCAGTGGATTTGTGGCATTATCACGCGGTTTTTGTACCCGGTTGTTGATGTCATTCCGTTTCATACGCTGCCT
GAATCTGGTCTTTATTTCATCGTCACCGCGCTTGCGTTGGCGTTCTTTTGGGTGTTGGTCATCCGCATGATGGTGGAGCT
CACTGGCAATCGAGTGTGGGATACCGTCCTTGTTGCGGCGTCTCCCCTGGTTGCTGTGCATGCGTTTACCAACTGGGATA
CTCCAGCCATTGCGGCGGTGATTGGTGCGATGCTTGCGGTGAAACGCGGAAACCCCTTGGTTGCGGGTGTGCTGATCGGC
GCGGGTACGGCGTTCAAATTGTGGCCGCTTTATCTTCTTGGTGCGTATTTGGTGCTGGCGGTCAAGAATAAGAATCTCAA
GCCGTTTATCACCATGGCTGCAGCGGCTGCGGTGACATGGCTCGTGGTGAATGTGCCAGTGATGATCGCGTACCCCAAGG
CGTGGAATGAATTCTTGCGCCTGAACCGGGAGCGTGGTGCGGAGTGGACCACGATTTACCAGGTCATCGACCGTAATTTG
CCGATCAATTTGAATGATCCAGTGCTGCTTAATGTGCTGAGCTTCGGCTTGTTTGGTGCATCGTGTGTGGCCATTTTGAT
CCTTGGGCTCAAGGTGCAGCGCACTCCCCGAGTCGCTGAGCTGGCCTTTTTGATTGTCGCGGCGTTTTTGCTGTTTAACA
AGGTGTGGAGTCCTCAGTATTCACTGTGGCTGGTCCCGTTGGCTGTTCTGGCATTTCCTCAGTGGAAAGTGCTGTTCCCG
TGGATGGTTACAGACGCCATGGTGTGGCCAATTTTGATGTGGCACATGCTCGGCACGGACAACAAGGGACTCCCCCATGA
AATGTTGGATCTCATCGTGATTTCCCGAGATGCCTTCATTGTGGTCATGATAGTAGGTGTAATCCGGCAGATGCTCGGAC
GACGTGCAGATCCGGTGATGGATGCGCACGCCGGGCGCGATTTGTTGGCCGGGCCCTTCGGCGCAGGCGAGCGTCGAAAA
GCATTGAAGGAAGTAAGTTGA

Upstream 100 bases:

>100_bases
GGTAGAAATCCTGCCGGGGCTGACTATCCCGGGAGATCTCTTAGGGATCGGCTAAAATCCGGTCGTAGCCTAAACGACCT
TAAAAAGGAGCCGACCGCCG

Downstream 100 bases:

>100_bases
GCACAACAGTTTTGCTGGTCACCATGGTCAGCGTTTTTGTGGGTTTTCTCTGTTTCGGCGGCGCGTTTGCCAGCTTCATG
TATAAGAAATCGAATAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Integral Membrane Protein-Like Protein

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MDQKLDQQKVDRVSPGDSEPVARDFINAIGGRFGRFAQVGTQRFWTPLRVLITTSLVFLAMGFLTKANCIQGSRGTDGVV
SLNWSGSRQYTSACYNDIVPLYGGRGIDAPGFPYAFSWQEGDLTRYMEYPVLGGIFQWICGIITRFLYPVVDVIPFHTLP
ESGLYFIVTALALAFFWVLVIRMMVELTGNRVWDTVLVAASPLVAVHAFTNWDTPAIAAVIGAMLAVKRGNPLVAGVLIG
AGTAFKLWPLYLLGAYLVLAVKNKNLKPFITMAAAAAVTWLVVNVPVMIAYPKAWNEFLRLNRERGAEWTTIYQVIDRNL
PINLNDPVLLNVLSFGLFGASCVAILILGLKVQRTPRVAELAFLIVAAFLLFNKVWSPQYSLWLVPLAVLAFPQWKVLFP
WMVTDAMVWPILMWHMLGTDNKGLPHEMLDLIVISRDAFIVVMIVGVIRQMLGRRADPVMDAHAGRDLLAGPFGAGERRK
ALKEVS

Sequences:

>Translated_486_residues
MDQKLDQQKVDRVSPGDSEPVARDFINAIGGRFGRFAQVGTQRFWTPLRVLITTSLVFLAMGFLTKANCIQGSRGTDGVV
SLNWSGSRQYTSACYNDIVPLYGGRGIDAPGFPYAFSWQEGDLTRYMEYPVLGGIFQWICGIITRFLYPVVDVIPFHTLP
ESGLYFIVTALALAFFWVLVIRMMVELTGNRVWDTVLVAASPLVAVHAFTNWDTPAIAAVIGAMLAVKRGNPLVAGVLIG
AGTAFKLWPLYLLGAYLVLAVKNKNLKPFITMAAAAAVTWLVVNVPVMIAYPKAWNEFLRLNRERGAEWTTIYQVIDRNL
PINLNDPVLLNVLSFGLFGASCVAILILGLKVQRTPRVAELAFLIVAAFLLFNKVWSPQYSLWLVPLAVLAFPQWKVLFP
WMVTDAMVWPILMWHMLGTDNKGLPHEMLDLIVISRDAFIVVMIVGVIRQMLGRRADPVMDAHAGRDLLAGPFGAGERRK
ALKEVS
>Mature_486_residues
MDQKLDQQKVDRVSPGDSEPVARDFINAIGGRFGRFAQVGTQRFWTPLRVLITTSLVFLAMGFLTKANCIQGSRGTDGVV
SLNWSGSRQYTSACYNDIVPLYGGRGIDAPGFPYAFSWQEGDLTRYMEYPVLGGIFQWICGIITRFLYPVVDVIPFHTLP
ESGLYFIVTALALAFFWVLVIRMMVELTGNRVWDTVLVAASPLVAVHAFTNWDTPAIAAVIGAMLAVKRGNPLVAGVLIG
AGTAFKLWPLYLLGAYLVLAVKNKNLKPFITMAAAAAVTWLVVNVPVMIAYPKAWNEFLRLNRERGAEWTTIYQVIDRNL
PINLNDPVLLNVLSFGLFGASCVAILILGLKVQRTPRVAELAFLIVAAFLLFNKVWSPQYSLWLVPLAVLAFPQWKVLFP
WMVTDAMVWPILMWHMLGTDNKGLPHEMLDLIVISRDAFIVVMIVGVIRQMLGRRADPVMDAHAGRDLLAGPFGAGERRK
ALKEVS

Specific function: Unknown

COG id: COG5650

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53931; Mature: 53931

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQKLDQQKVDRVSPGDSEPVARDFINAIGGRFGRFAQVGTQRFWTPLRVLITTSLVFLA
CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGFLTKANCIQGSRGTDGVVSLNWSGSRQYTSACYNDIVPLYGGRGIDAPGFPYAFSWQE
HHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCC
GDLTRYMEYPVLGGIFQWICGIITRFLYPVVDVIPFHTLPESGLYFIVTALALAFFWVLV
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
IRMMVELTGNRVWDTVLVAASPLVAVHAFTNWDTPAIAAVIGAMLAVKRGNPLVAGVLIG
HHHHHHHHCCHHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEC
AGTAFKLWPLYLLGAYLVLAVKNKNLKPFITMAAAAAVTWLVVNVPVMIAYPKAWNEFLR
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHH
LNRERGAEWTTIYQVIDRNLPINLNDPVLLNVLSFGLFGASCVAILILGLKVQRTPRVAE
HHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LAFLIVAAFLLFNKVWSPQYSLWLVPLAVLAFPQWKVLFPWMVTDAMVWPILMWHMLGTD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCC
NKGLPHEMLDLIVISRDAFIVVMIVGVIRQMLGRRADPVMDAHAGRDLLAGPFGAGERRK
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCCCCCCHHHH
ALKEVS
HHHHCC
>Mature Secondary Structure
MDQKLDQQKVDRVSPGDSEPVARDFINAIGGRFGRFAQVGTQRFWTPLRVLITTSLVFLA
CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGFLTKANCIQGSRGTDGVVSLNWSGSRQYTSACYNDIVPLYGGRGIDAPGFPYAFSWQE
HHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCC
GDLTRYMEYPVLGGIFQWICGIITRFLYPVVDVIPFHTLPESGLYFIVTALALAFFWVLV
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
IRMMVELTGNRVWDTVLVAASPLVAVHAFTNWDTPAIAAVIGAMLAVKRGNPLVAGVLIG
HHHHHHHHCCHHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEC
AGTAFKLWPLYLLGAYLVLAVKNKNLKPFITMAAAAAVTWLVVNVPVMIAYPKAWNEFLR
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHH
LNRERGAEWTTIYQVIDRNLPINLNDPVLLNVLSFGLFGASCVAILILGLKVQRTPRVAE
HHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LAFLIVAAFLLFNKVWSPQYSLWLVPLAVLAFPQWKVLFPWMVTDAMVWPILMWHMLGTD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCC
NKGLPHEMLDLIVISRDAFIVVMIVGVIRQMLGRRADPVMDAHAGRDLLAGPFGAGERRK
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCCCCCCHHHH
ALKEVS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA