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The map label for this gene is tnp5c(ISCg5c) [C]

Identifier: 62391790

GI number: 62391790

Start: 3128550

End: 3129788

Strand: Reverse

Name: tnp5c(ISCg5c) [C]

Synonym: cg3266

Alternate gene names: 62391790

Gene position: 3129788-3128550 (Counterclockwise)

Preceding gene: 62391791

Following gene: 62391788

Centisome position: 95.34

GC content: 51.74

Gene sequence:

>1239_bases
ATGAATCCATCACCAGTATCTTGTTGGCCATCCGCGCACCGCCTGAAAGCCCAAGGATGGGAATACGGTCCGATCTCTAT
CCGATTCGAAGGCATCGCCACCGGGGAACTGACTGCACCGATTCCATCCGTCTCAACTATCGCTTGCTTGTTACGCGCTG
CAGGAGCAGTCGAAAGTAACCCTAAGAAGCGACCAAAGTCGTCGGTGGTGAGGTTTCAACGAGGTCAAGCTATGGAAATG
TGGCAAATAGATGGTTTCATTTACACGCTGCACGATAGTGATCTGACTCGGGTCACGATCTATCAAATCCTTGATGATGC
CACTCGGTTTGATGTCGGAACCTGTGTCTTTCCCGCGAATGAAAACTCAGTCGATGCCCGAACAGTGCTAGAACAAGCGA
TTGCTCATTTTGGTGCCCCGCATGAATTACTCAGTGATAACGGCTCAGCGTTTAACCGGATGCGGCAAGGATACGTCGGA
AGTTTGGAAAGCTATCTCGCGACGGTGGGGTGTTTAAGCATTACCGGCAAGCCTGGGCATCCTCAAACCCAAGGTAAAAA
CGAACGCGGCCACCGCACACTATTTCGTTTCCTTCAAGCTCATCAACCACACACACTTGAGGAATGTGCGCACTATATTG
AACAGTTCCGTGATCATTGCAACAATCGTCGTCCACATCAGGGGTTGCCGAATAATCTCACTCCGGCTGCGGCCTGGGAG
ATTGTGGGGTGTGTGGAGCAACAACCCCCGATTGATCCCGTCGTGCTTCAACAGCAAGCTGATCACTATGCCCGTCGTCG
AATTGAGAAGCAATCAGATGTCTCGCTTGTTCGGCAGGAGGAATCTGTTCCGGTGTCTAAGATGCAGCAGACCGAGCAAC
GTCGACGGGTACGTCGTTTTGGTAAAAAGCCGGTGGATCCTGATGTGTTTACGTTTGCTGGGAATAATCAGAAGGTGGTG
TTCCAGGGGATGCGTATTTCTGTTCCTCGTACGATGAGGGACAGGGAGTTTTATCGGACGGTGACGGCAACTGAGCTTGG
TTTCTGGGATGCGATAACCGGGGAGCTTGAGTTGTTGATTTCGTTGCCGGTTGTGGCGATTGCCCGGGGTAAGTCGTATA
TCAGTTCTTACAACATTCGTGGGGTGTGGATGCAGCACCCGACGCTGTTGTGGCAACGCAAACGTGATGAGGCTGAGAAG
CGATTTAAGTCGATAGATCCGGGGGATCTACTGCGCTAG

Upstream 100 bases:

>100_bases
CGGCGCAGCTTCTACAACATCCGCAACCGATACCAACAAGATGCCAGTGCAGCGCTGCATCCACGCTCCAGCGCCCAGAT
CACCTCCCGGCGAACATACG

Downstream 100 bases:

>100_bases
AAACTTGTCCCGAGGGTGAGGGTTGGTGTGCACACTGCTGTGGCTTTGTGTGTGCACAACCTAGTGGGATCGGGCGTGCG
CAAGGATATGATATTGAGTG

Product: transposase

Products: NA

Alternate protein names: Transposase ; Integrase Catalytic Subunit; Transposase Of; Integrase Catalytic Region; Transposase For ISMyma; Transposase Of ISGbem_A; ISmav2-Like Transposase; Integrase; Integrase Catalytic Domain-Containing Protein; Partial Transposase Protein; Transposase Integrase; Integrase Family Protein

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MNPSPVSCWPSAHRLKAQGWEYGPISIRFEGIATGELTAPIPSVSTIACLLRAAGAVESNPKKRPKSSVVRFQRGQAMEM
WQIDGFIYTLHDSDLTRVTIYQILDDATRFDVGTCVFPANENSVDARTVLEQAIAHFGAPHELLSDNGSAFNRMRQGYVG
SLESYLATVGCLSITGKPGHPQTQGKNERGHRTLFRFLQAHQPHTLEECAHYIEQFRDHCNNRRPHQGLPNNLTPAAAWE
IVGCVEQQPPIDPVVLQQQADHYARRRIEKQSDVSLVRQEESVPVSKMQQTEQRRRVRRFGKKPVDPDVFTFAGNNQKVV
FQGMRISVPRTMRDREFYRTVTATELGFWDAITGELELLISLPVVAIARGKSYISSYNIRGVWMQHPTLLWQRKRDEAEK
RFKSIDPGDLLR

Sequences:

>Translated_412_residues
MNPSPVSCWPSAHRLKAQGWEYGPISIRFEGIATGELTAPIPSVSTIACLLRAAGAVESNPKKRPKSSVVRFQRGQAMEM
WQIDGFIYTLHDSDLTRVTIYQILDDATRFDVGTCVFPANENSVDARTVLEQAIAHFGAPHELLSDNGSAFNRMRQGYVG
SLESYLATVGCLSITGKPGHPQTQGKNERGHRTLFRFLQAHQPHTLEECAHYIEQFRDHCNNRRPHQGLPNNLTPAAAWE
IVGCVEQQPPIDPVVLQQQADHYARRRIEKQSDVSLVRQEESVPVSKMQQTEQRRRVRRFGKKPVDPDVFTFAGNNQKVV
FQGMRISVPRTMRDREFYRTVTATELGFWDAITGELELLISLPVVAIARGKSYISSYNIRGVWMQHPTLLWQRKRDEAEK
RFKSIDPGDLLR
>Mature_412_residues
MNPSPVSCWPSAHRLKAQGWEYGPISIRFEGIATGELTAPIPSVSTIACLLRAAGAVESNPKKRPKSSVVRFQRGQAMEM
WQIDGFIYTLHDSDLTRVTIYQILDDATRFDVGTCVFPANENSVDARTVLEQAIAHFGAPHELLSDNGSAFNRMRQGYVG
SLESYLATVGCLSITGKPGHPQTQGKNERGHRTLFRFLQAHQPHTLEECAHYIEQFRDHCNNRRPHQGLPNNLTPAAAWE
IVGCVEQQPPIDPVVLQQQADHYARRRIEKQSDVSLVRQEESVPVSKMQQTEQRRRVRRFGKKPVDPDVFTFAGNNQKVV
FQGMRISVPRTMRDREFYRTVTATELGFWDAITGELELLISLPVVAIARGKSYISSYNIRGVWMQHPTLLWQRKRDEAEK
RFKSIDPGDLLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46716; Mature: 46716

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSPVSCWPSAHRLKAQGWEYGPISIRFEGIATGELTAPIPSVSTIACLLRAAGAVESN
CCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
PKKRPKSSVVRFQRGQAMEMWQIDGFIYTLHDSDLTRVTIYQILDDATRFDVGTCVFPAN
CCCCCHHHHHHHHCCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCC
ENSVDARTVLEQAIAHFGAPHELLSDNGSAFNRMRQGYVGSLESYLATVGCLSITGKPGH
CCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
PQTQGKNERGHRTLFRFLQAHQPHTLEECAHYIEQFRDHCNNRRPHQGLPNNLTPAAAWE
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
IVGCVEQQPPIDPVVLQQQADHYARRRIEKQSDVSLVRQEESVPVSKMQQTEQRRRVRRF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GKKPVDPDVFTFAGNNQKVVFQGMRISVPRTMRDREFYRTVTATELGFWDAITGELELLI
CCCCCCCCEEEEECCCCEEEEECEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SLPVVAIARGKSYISSYNIRGVWMQHPTLLWQRKRDEAEKRFKSIDPGDLLR
HHHHHHHHHCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MNPSPVSCWPSAHRLKAQGWEYGPISIRFEGIATGELTAPIPSVSTIACLLRAAGAVESN
CCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
PKKRPKSSVVRFQRGQAMEMWQIDGFIYTLHDSDLTRVTIYQILDDATRFDVGTCVFPAN
CCCCCHHHHHHHHCCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCC
ENSVDARTVLEQAIAHFGAPHELLSDNGSAFNRMRQGYVGSLESYLATVGCLSITGKPGH
CCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
PQTQGKNERGHRTLFRFLQAHQPHTLEECAHYIEQFRDHCNNRRPHQGLPNNLTPAAAWE
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
IVGCVEQQPPIDPVVLQQQADHYARRRIEKQSDVSLVRQEESVPVSKMQQTEQRRRVRRF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GKKPVDPDVFTFAGNNQKVVFQGMRISVPRTMRDREFYRTVTATELGFWDAITGELELLI
CCCCCCCCEEEEECCCCEEEEECEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SLPVVAIARGKSYISSYNIRGVWMQHPTLLWQRKRDEAEKRFKSIDPGDLLR
HHHHHHHHHCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA