| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is uspA3 [C]
Identifier: 62391781
GI number: 62391781
Start: 3115758
End: 3116663
Strand: Reverse
Name: uspA3 [C]
Synonym: cg3255
Alternate gene names: 62391781
Gene position: 3116663-3115758 (Counterclockwise)
Preceding gene: 62391782
Following gene: 62391780
Centisome position: 94.94
GC content: 56.07
Gene sequence:
>906_bases ATGAGCACTGAAGACATTGTCGTCGTAGCAGTAGATGGCTCGGACGCCTCAAAACAAGCTGTTCGGTGGGCTGCAAATAC CGCCAACAAACGTGGCATTCCACTTCGCTTGGCTTCCAGCTACACCATGCCTCAGTTCCTCTACGCAGAGGGAATGGTTC CACCACAAGAGCTTTTCGATGACCTCCAGGCCGAAGCCCTGGAAAAGATTAACGAAGCCCGTGACATCGCCCATGAGGTA GCGCCAGAAATCAAGATCGGGCACACCATCGCTGAAGGCAGTCCCATCGACATGCTGTTGGAAATGTCTCCCGATGCCAC AATGATCGTCATGGGTTCCCGCGGACTCGGCGGACTCTCCGGAATGGTCATGGGCTCCGTCTCCGGTGCAGTGGTCAGCC ACGCAAAGTGTCCAGTCGTTGTTGTCCGTGAAGACAGCGCAGTCAACGAAGACAGCAAGTACGGCCCAGTCGTCGTCGGT GTGGATGGCTCCGAAGTCTCCCAACAGGCAACCGAATACGCATTTGCGGAAGCTGAAGCTCGTGGCGCCGAACTCGTTGC AGTTCACACCTGGATGGACATGCAGGTACAGGCATCACTTGCAGGTCTTGCAGCTGCTCAACAGCAGTGGGATGAAGTGG AACGTCAGCAAACCGACATGCTGATCGAACGCCTCGCACCACTGGTGGAAAAGTACCCAAGTGTAACCGTCAAGAAGATC ATCACCCGTGACCGCCCAGTTCGCGCACTTGCAGAAGCATCTGAAAACGCGCAGCTCCTAGTCGTTGGTTCCCATGGTCG TGGCGGATTTAAGGGCATGCTCCTTGGCTCCACCTCCCGCGCACTGCTGCAATCCGCACCGTGCCCAATGATGGTGGTTC GCCCACCTGAGAAGATTAAGAAGTAG
Upstream 100 bases:
>100_bases GTGCGGATCGGGTATCCGCGCTACACTTAGAGGTGTTAGAGATCATGAGTTTCCACGAACTGTAACGCAGGATTCACCAA TCAATGAAAGGTCGACCGAC
Downstream 100 bases:
>100_bases TTTCTTTTAAGTTTCGATGCCCCGGTTTCCTGATTTTGTGCAGGGAGGCCGGGGCATTGGTGTTTGCGGGTTAGTTCGGG CCATTCGAAAGGGAGAAACC
Product: universal stress protein
Products: NA
Alternate protein names: USP Rv2005c [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSTEDIVVVAVDGSDASKQAVRWAANTANKRGIPLRLASSYTMPQFLYAEGMVPPQELFDDLQAEALEKINEARDIAHEV APEIKIGHTIAEGSPIDMLLEMSPDATMIVMGSRGLGGLSGMVMGSVSGAVVSHAKCPVVVVREDSAVNEDSKYGPVVVG VDGSEVSQQATEYAFAEAEARGAELVAVHTWMDMQVQASLAGLAAAQQQWDEVERQQTDMLIERLAPLVEKYPSVTVKKI ITRDRPVRALAEASENAQLLVVGSHGRGGFKGMLLGSTSRALLQSAPCPMMVVRPPEKIKK
Sequences:
>Translated_301_residues MSTEDIVVVAVDGSDASKQAVRWAANTANKRGIPLRLASSYTMPQFLYAEGMVPPQELFDDLQAEALEKINEARDIAHEV APEIKIGHTIAEGSPIDMLLEMSPDATMIVMGSRGLGGLSGMVMGSVSGAVVSHAKCPVVVVREDSAVNEDSKYGPVVVG VDGSEVSQQATEYAFAEAEARGAELVAVHTWMDMQVQASLAGLAAAQQQWDEVERQQTDMLIERLAPLVEKYPSVTVKKI ITRDRPVRALAEASENAQLLVVGSHGRGGFKGMLLGSTSRALLQSAPCPMMVVRPPEKIKK >Mature_300_residues STEDIVVVAVDGSDASKQAVRWAANTANKRGIPLRLASSYTMPQFLYAEGMVPPQELFDDLQAEALEKINEARDIAHEVA PEIKIGHTIAEGSPIDMLLEMSPDATMIVMGSRGLGGLSGMVMGSVSGAVVSHAKCPVVVVREDSAVNEDSKYGPVVVGV DGSEVSQQATEYAFAEAEARGAELVAVHTWMDMQVQASLAGLAAAQQQWDEVERQQTDMLIERLAPLVEKYPSVTVKKII TRDRPVRALAEASENAQLLVVGSHGRGGFKGMLLGSTSRALLQSAPCPMMVVRPPEKIKK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 32223; Mature: 32092
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEDIVVVAVDGSDASKQAVRWAANTANKRGIPLRLASSYTMPQFLYAEGMVPPQELFD CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCCCHHHHHH DLQAEALEKINEARDIAHEVAPEIKIGHTIAEGSPIDMLLEMSPDATMIVMGSRGLGGLS HHHHHHHHHHHHHHHHHHHHCCCEEECEEECCCCCCEEEEECCCCCEEEEEECCCCCCHH GMVMGSVSGAVVSHAKCPVVVVREDSAVNEDSKYGPVVVGVDGSEVSQQATEYAFAEAEA HHHHHCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHC RGAELVAVHTWMDMQVQASLAGLAAAQQQWDEVERQQTDMLIERLAPLVEKYPSVTVKKI CCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ITRDRPVRALAEASENAQLLVVGSHGRGGFKGMLLGSTSRALLQSAPCPMMVVRPPEKIK HHCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHCCCCCEEEECCHHHHC K C >Mature Secondary Structure STEDIVVVAVDGSDASKQAVRWAANTANKRGIPLRLASSYTMPQFLYAEGMVPPQELFD CCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCCCHHHHHH DLQAEALEKINEARDIAHEVAPEIKIGHTIAEGSPIDMLLEMSPDATMIVMGSRGLGGLS HHHHHHHHHHHHHHHHHHHHCCCEEECEEECCCCCCEEEEECCCCCEEEEEECCCCCCHH GMVMGSVSGAVVSHAKCPVVVVREDSAVNEDSKYGPVVVGVDGSEVSQQATEYAFAEAEA HHHHHCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHC RGAELVAVHTWMDMQVQASLAGLAAAQQQWDEVERQQTDMLIERLAPLVEKYPSVTVKKI CCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ITRDRPVRALAEASENAQLLVVGSHGRGGFKGMLLGSTSRALLQSAPCPMMVVRPPEKIK HHCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHCCCCCEEEECCHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]