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The map label for this gene is yidA [H]

Identifier: 62391728

GI number: 62391728

Start: 3065646

End: 3066482

Strand: Reverse

Name: yidA [H]

Synonym: cg3199

Alternate gene names: 62391728

Gene position: 3066482-3065646 (Counterclockwise)

Preceding gene: 62391729

Following gene: 62391727

Centisome position: 93.41

GC content: 58.78

Gene sequence:

>837_bases
ATGATTGCACTGGGTTCAGCGCCCAAGCTGGTTGCCTCCGATGTTGATGGCACCCTCATCAATAGTTCTGAGCGCGTGCC
GCAACGCCTGCGCGATGTGATCACGCGGATGACCAATCAGGGCGTGACCCTGGCGCTGTCCACGGGCCGCCCGCCGCGCT
GGATTCATTATGTGCTGGATCAGCTGAGCGTGAAGCCGATTTGCGTCTGCGCGAATGGCGCGGTGCTGTACGATTCCGCT
GCCGATGAGATTCTTGCAGCTCAGACGCTTAGTCCGGAGGTTATGGCGAGTGCCGTCATGGCTGCGCGTGCCGCTTTGGA
AGAGCATGGCGGGGTCAGTATTGCTGTCGAGCGCGCTGGAAAATCCGCTTACGATCCAGCCGATGAGCTGTTTTTGGTCA
CCCCGGAATACAGCCACGCGTGGCCCTCAAATGATCACGGCACCTTCGAGGAAGCCGAAGTGCTTTCCGAACCAGCCACC
AAATTGTTGATGCGCAGCGATTACCTCGATTCCAAGCAGCTTTTTGATATCGTCCGCGCCTCCGTTCCCGAGGATCAAGT
CCACGTCACCTTCTCCATGTCCGGCGGACTCATTGAGATCGCAGCGCCCGGCGTGACCAAGGCACTGGGCGTATCGATGC
TGGCAGAGCGCCTAAAGATTGCGCAAAAGGACGTTATAACGTTCGGCGACATGCCCAACGATATTGAAATGCTCCAGTGG
GCCGGCCGGGGAGTGGCGATGGGCAACGCCCGACCAGAGGTCAAAGCCGTGTCAGACCACATCACCCGCACCAACGACGA
CGCCGGTGTAGCAGATGTATTGGAGTGGTGGTTCTAA

Upstream 100 bases:

>100_bases
CGAAAATGTTGGAAATCGCCGAACGGGAACGTCGACAAGCAAAACGCGCGGCAAAGGTCGCCAAGAAACGCACCACCTTT
ATAAGGAAAATCTTTAAAAA

Downstream 100 bases:

>100_bases
TAGGTGGTGTTAAAACACTGCTTAGTGGCCCAATACGTGCAAAAATAAGGCCATGAGAATCTCAAAGGCCAATGCGTATG
TTGCAGCGATTGACCAAGGC

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MIALGSAPKLVASDVDGTLINSSERVPQRLRDVITRMTNQGVTLALSTGRPPRWIHYVLDQLSVKPICVCANGAVLYDSA
ADEILAAQTLSPEVMASAVMAARAALEEHGGVSIAVERAGKSAYDPADELFLVTPEYSHAWPSNDHGTFEEAEVLSEPAT
KLLMRSDYLDSKQLFDIVRASVPEDQVHVTFSMSGGLIEIAAPGVTKALGVSMLAERLKIAQKDVITFGDMPNDIEMLQW
AGRGVAMGNARPEVKAVSDHITRTNDDAGVADVLEWWF

Sequences:

>Translated_278_residues
MIALGSAPKLVASDVDGTLINSSERVPQRLRDVITRMTNQGVTLALSTGRPPRWIHYVLDQLSVKPICVCANGAVLYDSA
ADEILAAQTLSPEVMASAVMAARAALEEHGGVSIAVERAGKSAYDPADELFLVTPEYSHAWPSNDHGTFEEAEVLSEPAT
KLLMRSDYLDSKQLFDIVRASVPEDQVHVTFSMSGGLIEIAAPGVTKALGVSMLAERLKIAQKDVITFGDMPNDIEMLQW
AGRGVAMGNARPEVKAVSDHITRTNDDAGVADVLEWWF
>Mature_278_residues
MIALGSAPKLVASDVDGTLINSSERVPQRLRDVITRMTNQGVTLALSTGRPPRWIHYVLDQLSVKPICVCANGAVLYDSA
ADEILAAQTLSPEVMASAVMAARAALEEHGGVSIAVERAGKSAYDPADELFLVTPEYSHAWPSNDHGTFEEAEVLSEPAT
KLLMRSDYLDSKQLFDIVRASVPEDQVHVTFSMSGGLIEIAAPGVTKALGVSMLAERLKIAQKDVITFGDMPNDIEMLQW
AGRGVAMGNARPEVKAVSDHITRTNDDAGVADVLEWWF

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=276, Percent_Identity=28.9855072463768, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1786982, Length=278, Percent_Identity=26.2589928057554, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787043, Length=269, Percent_Identity=23.0483271375465, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29987; Mature: 29987

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALGSAPKLVASDVDGTLINSSERVPQRLRDVITRMTNQGVTLALSTGRPPRWIHYVLD
CCCCCCCCCHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
QLSVKPICVCANGAVLYDSAADEILAAQTLSPEVMASAVMAARAALEEHGGVSIAVERAG
HCCCCEEEEECCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
KSAYDPADELFLVTPEYSHAWPSNDHGTFEEAEVLSEPATKLLMRSDYLDSKQLFDIVRA
CCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SVPEDQVHVTFSMSGGLIEIAAPGVTKALGVSMLAERLKIAQKDVITFGDMPNDIEMLQW
CCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH
AGRGVAMGNARPEVKAVSDHITRTNDDAGVADVLEWWF
CCCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MIALGSAPKLVASDVDGTLINSSERVPQRLRDVITRMTNQGVTLALSTGRPPRWIHYVLD
CCCCCCCCCHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
QLSVKPICVCANGAVLYDSAADEILAAQTLSPEVMASAVMAARAALEEHGGVSIAVERAG
HCCCCEEEEECCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
KSAYDPADELFLVTPEYSHAWPSNDHGTFEEAEVLSEPATKLLMRSDYLDSKQLFDIVRA
CCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SVPEDQVHVTFSMSGGLIEIAAPGVTKALGVSMLAERLKIAQKDVITFGDMPNDIEMLQW
CCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH
AGRGVAMGNARPEVKAVSDHITRTNDDAGVADVLEWWF
CCCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]