| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is udgA2 [H]
Identifier: 62391687
GI number: 62391687
Start: 3008743
End: 3010062
Strand: Reverse
Name: udgA2 [H]
Synonym: cg3154
Alternate gene names: 62391687
Gene position: 3010062-3008743 (Counterclockwise)
Preceding gene: 62391688
Following gene: 62391682
Centisome position: 91.69
GC content: 57.95
Gene sequence:
>1320_bases ATGCGGATGACAGTGATTGGTACGGGTTACCTTGGCGCTACGCACGCGGCCTGCATGGCTGAGCTTAGCCATGAGGTTCT TGGTGTTGATGTCGATGAGGCAAAGATTGCGTCGTTGAAGGACAGCAAGGTCCCATTTTTTGAGCCGGGTTTGCCTGAGG TTTTGGAGCGCAATCTGGAAAATGGTCGCCTGAACTTCACTACTGATTATGCGGAGGCTGCGGCTTTCGCGCAGGTGCAT TTCTTGGGCGTGGGTACTCCTCAGCAGAAGGGTACTTATGCGGCGGATCTGACGTATGTTCGTCAGGTTGTTGAGGATTT GGTGCCGCTGCTTGAGGGCGAGCACATTATTTTCGGCAAGTCTACGGTTCCGGTTGGTACTGCTGAGCAGTTGCAGGAGC TTGCTGATTCTCTGGTCAAGCCTGGTTCGCACGTGGAGATCGCGTGGAATCCGGAGTTCTTGCGTGAGGGCTACGCGGTC AAAGACACCATCACTCCGGACCGCATCGTGGTGGGTGTGCGTGAGGGGGCGACAGCAGAGGCGATCGCTCGCGAGGTTTA CGCCACCGCGATTGCTGCCGATACCCCATTTTTGGTGACTGATCTTGCTACCGCTGAGCTGGTGAAAGTTTCCGCGAATG CGTTCTTGGCCACCAAGATTTCCTTCATCAATGCGGTCGCTGAGATTTGTGAGCAGACCGGCGCCGATGTGGTTGCGCTT GCGGATGCCATCGGTCACGACGATCGTATCGGCCGAAAGTTCTTAGGCGCGGGCCTGGGATTCGGTGGCGGTTGTTTGCC TAAAGACATCCGCGCTTTCATGGCACGCGCGGGCGAATTGGGTGCTGACCAGGCATTAACGTTCTTGCGTGAGGTCGATT CCATCAATATGCGTCGTCGCGACCGTGTGGTGCAGCTGGCCAAAGAGATGTGTGGCGGTTCGCTGCTGGGCAAGCGGGTT ACAGTGCTCGGCGCCGCATTCAAACCCAACTCGGACGATGTCCGCGATTCTCCGGCGCTGTCGGTCGCGGGTTCGCTGTC GCTCCAGGGTGCGGCGGTCTCGGTCTACGACCCGGAAGCTATGGACAACGCTCGACGCGTCTTCCCGACGCTCAGCTATG CGTCCAGCACTAAAGAGGCGCTTATCGACGCCCACCTCGTCGTTCTTGCCACTGAATGGCAAGAATTCCGCGACCTTGAC CCCGAAGTGGCGGGAGGGGTCGTCGAGAAGCGCGCTATTATTGATGGCCGAAACGTCCTCGATGTTGCCAAATGGAAGGC CGCCGGTTGGGAAATGGAAGCGCTCGGCCGCAACCTTTAG
Upstream 100 bases:
>100_bases TTCCCCAACAAGTAAGCAATCATGTGTTCCGGTCGCGGGCTGTATCAAAACGTGTTGAGATAATCTCCAGTCCACTCTTC ATTGAAAGGAATCACCCTAC
Downstream 100 bases:
>100_bases TGGCGGTGGATCAGGCGGGGCTTGCCATCATCTGGGGCAGGCTCATCGCCGGGTACCGTCCATGCGGCGATCAGCGTCGT GATCGGCACCGCCAGTGTCA
Product: UDP-glucose 6-dehydrogenase
Products: NA
Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MRMTVIGTGYLGATHAACMAELSHEVLGVDVDEAKIASLKDSKVPFFEPGLPEVLERNLENGRLNFTTDYAEAAAFAQVH FLGVGTPQQKGTYAADLTYVRQVVEDLVPLLEGEHIIFGKSTVPVGTAEQLQELADSLVKPGSHVEIAWNPEFLREGYAV KDTITPDRIVVGVREGATAEAIAREVYATAIAADTPFLVTDLATAELVKVSANAFLATKISFINAVAEICEQTGADVVAL ADAIGHDDRIGRKFLGAGLGFGGGCLPKDIRAFMARAGELGADQALTFLREVDSINMRRRDRVVQLAKEMCGGSLLGKRV TVLGAAFKPNSDDVRDSPALSVAGSLSLQGAAVSVYDPEAMDNARRVFPTLSYASSTKEALIDAHLVVLATEWQEFRDLD PEVAGGVVEKRAIIDGRNVLDVAKWKAAGWEMEALGRNL
Sequences:
>Translated_439_residues MRMTVIGTGYLGATHAACMAELSHEVLGVDVDEAKIASLKDSKVPFFEPGLPEVLERNLENGRLNFTTDYAEAAAFAQVH FLGVGTPQQKGTYAADLTYVRQVVEDLVPLLEGEHIIFGKSTVPVGTAEQLQELADSLVKPGSHVEIAWNPEFLREGYAV KDTITPDRIVVGVREGATAEAIAREVYATAIAADTPFLVTDLATAELVKVSANAFLATKISFINAVAEICEQTGADVVAL ADAIGHDDRIGRKFLGAGLGFGGGCLPKDIRAFMARAGELGADQALTFLREVDSINMRRRDRVVQLAKEMCGGSLLGKRV TVLGAAFKPNSDDVRDSPALSVAGSLSLQGAAVSVYDPEAMDNARRVFPTLSYASSTKEALIDAHLVVLATEWQEFRDLD PEVAGGVVEKRAIIDGRNVLDVAKWKAAGWEMEALGRNL >Mature_439_residues MRMTVIGTGYLGATHAACMAELSHEVLGVDVDEAKIASLKDSKVPFFEPGLPEVLERNLENGRLNFTTDYAEAAAFAQVH FLGVGTPQQKGTYAADLTYVRQVVEDLVPLLEGEHIIFGKSTVPVGTAEQLQELADSLVKPGSHVEIAWNPEFLREGYAV KDTITPDRIVVGVREGATAEAIAREVYATAIAADTPFLVTDLATAELVKVSANAFLATKISFINAVAEICEQTGADVVAL ADAIGHDDRIGRKFLGAGLGFGGGCLPKDIRAFMARAGELGADQALTFLREVDSINMRRRDRVVQLAKEMCGGSLLGKRV TVLGAAFKPNSDDVRDSPALSVAGSLSLQGAAVSVYDPEAMDNARRVFPTLSYASSTKEALIDAHLVVLATEWQEFRDLD PEVAGGVVEKRAIIDGRNVLDVAKWKAAGWEMEALGRNL
Specific function: Unknown
COG id: COG1004
COG function: function code M; Predicted UDP-glucose 6-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=465, Percent_Identity=33.3333333333333, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI296040438, Length=365, Percent_Identity=33.6986301369863, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI296040443, Length=314, Percent_Identity=33.1210191082803, Blast_Score=171, Evalue=2e-42, Organism=Escherichia coli, GI48994968, Length=433, Percent_Identity=26.5588914549654, Blast_Score=141, Evalue=9e-35, Organism=Escherichia coli, GI1788340, Length=361, Percent_Identity=27.7008310249307, Blast_Score=140, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17560350, Length=460, Percent_Identity=33.9130434782609, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI17136908, Length=462, Percent_Identity=34.1991341991342, Blast_Score=254, Evalue=8e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR021157 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: =1.1.1.22 [H]
Molecular weight: Translated: 46984; Mature: 46984
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTVIGTGYLGATHAACMAELSHEVLGVDVDEAKIASLKDSKVPFFEPGLPEVLERNLE CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCC NGRLNFTTDYAEAAAFAQVHFLGVGTPQQKGTYAADLTYVRQVVEDLVPLLEGEHIIFGK CCEEEEEECHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC STVPVGTAEQLQELADSLVKPGSHVEIAWNPEFLREGYAVKDTITPDRIVVGVREGATAE CCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCEECCCCCCEEEEEECCCCHHH AIAREVYATAIAADTPFLVTDLATAELVKVSANAFLATKISFINAVAEICEQTGADVVAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEH ADAIGHDDRIGRKFLGAGLGFGGGCLPKDIRAFMARAGELGADQALTFLREVDSINMRRR HHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHH DRVVQLAKEMCGGSLLGKRVTVLGAAFKPNSDDVRDSPALSVAGSLSLQGAAVSVYDPEA HHHHHHHHHHCCCHHHCCEEEEEEEECCCCCCCCCCCCCCEEECCCEECCCEEEEECCHH MDNARRVFPTLSYASSTKEALIDAHLVVLATEWQEFRDLDPEVAGGVVEKRAIIDGRNVL HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHCCCHHHHCCHHHHHHHCCCCCHH DVAKWKAAGWEMEALGRNL HHHHHHCCCCCHHHHCCCC >Mature Secondary Structure MRMTVIGTGYLGATHAACMAELSHEVLGVDVDEAKIASLKDSKVPFFEPGLPEVLERNLE CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCC NGRLNFTTDYAEAAAFAQVHFLGVGTPQQKGTYAADLTYVRQVVEDLVPLLEGEHIIFGK CCEEEEEECHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC STVPVGTAEQLQELADSLVKPGSHVEIAWNPEFLREGYAVKDTITPDRIVVGVREGATAE CCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCEECCCCCCEEEEEECCCCHHH AIAREVYATAIAADTPFLVTDLATAELVKVSANAFLATKISFINAVAEICEQTGADVVAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEH ADAIGHDDRIGRKFLGAGLGFGGGCLPKDIRAFMARAGELGADQALTFLREVDSINMRRR HHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHH DRVVQLAKEMCGGSLLGKRVTVLGAAFKPNSDDVRDSPALSVAGSLSLQGAAVSVYDPEA HHHHHHHHHHCCCHHHCCEEEEEEEECCCCCCCCCCCCCCEEECCCEECCCEEEEECCHH MDNARRVFPTLSYASSTKEALIDAHLVVLATEWQEFRDLDPEVAGGVVEKRAIIDGRNVL HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHCCCHHHHCCHHHHHHHCCCCCHH DVAKWKAAGWEMEALGRNL HHHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9765575; 11481430 [H]