| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is hspR [H]
Identifier: 62391632
GI number: 62391632
Start: 2955326
End: 2955766
Strand: Reverse
Name: hspR [H]
Synonym: cg3097
Alternate gene names: 62391632
Gene position: 2955766-2955326 (Counterclockwise)
Preceding gene: 62391633
Following gene: 62391631
Centisome position: 90.04
GC content: 56.92
Gene sequence:
>441_bases ATGGCATCCACACCGAAAAAATCCAACGATGAAGGTCAGTTTGACCGTGTCGATTTTCAAGGGGAAGTCTTCGTTATCTC TGTCGCAGCCGAGCTTGCCGGCATGCATGCCCAAACTTTGCGAACCTACGATCGCATGGGTTTGGTCACCCCGATACGCA CTCGCGGAGGCGGTCGCCGTTACTCCCGCGCTGACGTGGAATTACTCCGAGAAATTCAGCACCTCAGCCAGGAGGAAGGC GTAAACCTCGCCGGAATCAAGGCGATCATCGAGCTCGGCGAAGAAAACCGAAACCTCAAAGAATCCCTGCGTAAGGTCAC AGCTGAGAATGAGCAGCTCAAAGATCAATTACGCAGCGGGCGTCCGCGTGGCGAGCTGGTGCACGTGCCCCGCTCCACCG CGGTGGTCATGTGGGAACGCCGCAAGGGGCGTTCCAAGTAA
Upstream 100 bases:
>100_bases GCATATGCTGAAGCAGAAACTAATTCAGGTTTTGATCCCCGCGCTAACTGGGCGGGCCAGAACCGCTAGACGTTCTCTTT GAGAAAGGAGGTGACGAAAC
Downstream 100 bases:
>100_bases AAACATGCTTGTCGACGCCACTTTCTAGCAAATTAAGCGGGCACCTCCATTTATCTTTTGGAGGTGCCCGTTTCGTGCTT TCGCCAATTAGATACATGTA
Product: transcriptional regulator MERR family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MASTPKKSNDEGQFDRVDFQGEVFVISVAAELAGMHAQTLRTYDRMGLVTPIRTRGGGRRYSRADVELLREIQHLSQEEG VNLAGIKAIIELGEENRNLKESLRKVTAENEQLKDQLRSGRPRGELVHVPRSTAVVMWERRKGRSK
Sequences:
>Translated_146_residues MASTPKKSNDEGQFDRVDFQGEVFVISVAAELAGMHAQTLRTYDRMGLVTPIRTRGGGRRYSRADVELLREIQHLSQEEG VNLAGIKAIIELGEENRNLKESLRKVTAENEQLKDQLRSGRPRGELVHVPRSTAVVMWERRKGRSK >Mature_145_residues ASTPKKSNDEGQFDRVDFQGEVFVISVAAELAGMHAQTLRTYDRMGLVTPIRTRGGGRRYSRADVELLREIQHLSQEEGV NLAGIKAIIELGEENRNLKESLRKVTAENEQLKDQLRSGRPRGELVHVPRSTAVVMWERRKGRSK
Specific function: Binds to three inverted repeats (IR1-IR3) in the promoter region of the dnaK operon [H]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH merR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR000551 [H]
Pfam domain/function: PF00376 MerR [H]
EC number: NA
Molecular weight: Translated: 16512; Mature: 16381
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTPKKSNDEGQFDRVDFQGEVFVISVAAELAGMHAQTLRTYDRMGLVTPIRTRGGGRR CCCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC YSRADVELLREIQHLSQEEGVNLAGIKAIIELGEENRNLKESLRKVTAENEQLKDQLRSG CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCC RPRGELVHVPRSTAVVMWERRKGRSK CCCCCEEECCCCCEEEEEECCCCCCC >Mature Secondary Structure ASTPKKSNDEGQFDRVDFQGEVFVISVAAELAGMHAQTLRTYDRMGLVTPIRTRGGGRR CCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC YSRADVELLREIQHLSQEEGVNLAGIKAIIELGEENRNLKESLRKVTAENEQLKDQLRSG CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCC RPRGELVHVPRSTAVVMWERRKGRSK CCCCCEEECCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8801421; 12000953 [H]