| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is pyrE [H]
Identifier: 62391608
GI number: 62391608
Start: 2930788
End: 2931342
Strand: Reverse
Name: pyrE [H]
Synonym: cg3071
Alternate gene names: 62391608
Gene position: 2931342-2930788 (Counterclockwise)
Preceding gene: 62391609
Following gene: 62391607
Centisome position: 89.3
GC content: 59.1
Gene sequence:
>555_bases ATGTCATCTAATTCCATTAACGCAGAAGCGCGCGCTGAGCTTGCTGAACTGATCAAAGAGCTAGCTGTCGTCCACGGTGA AGTCACCTTGTCTTCGGGCAAGAAGGCTGATTACTACATCGATGTCCGTCGTGCCACCTTGCACGCGCGCGCATCTCGCC TGATCGGTCAGCTGCTGCGCGAAGCCACCGCTGACTGGGACTATGACGCAGTTGGCGGCCTGACCTTGGGCGCTGACCCG GTTGCCACCGCCATCATGCACGCCGACGGCCGCGATATCAACGCGTTTGTGGTGCGCAAGGAGGCCAAGAAGCACGGCAT GCAGCGTCGCATTGAGGGCCCTGACCTGACGGGCAAGAAGGTGCTCGTGGTGGAAGATACCACCACCACCGGAAATTCCC CTCTGACAGCTGTTGCCGCGTTGCGTGAAGCTGGCATTGAGGTTGTGGGCGTTGCCACCGTGGTCGATCGCGCAACCGGT GCAGATGAGGTTATCGCAGCGGAAGGCCTTCCTTACCGCAGCTTGCTGGGACTTTCTGATCTTGGACTCAACTAA
Upstream 100 bases:
>100_bases GAAAACTGGTGTTTTTCGGCCGTGTCCACCCCAGGTTCTATGCTGTAACAAACGCGGGTTTAAACCTCAATCATCAAATT AGGGAAGGGCTGGGAAATCC
Downstream 100 bases:
>100_bases CACCCCCGGCCCCACGGAGTGGGGCGAGTCCCGCGTGGGCAAAGGTCCATGGGAAGAGGAAAACCCCGGCGTACCTCGGC CTACAAGCCCGCTTTTCGAC
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSSNSINAEARAELAELIKELAVVHGEVTLSSGKKADYYIDVRRATLHARASRLIGQLLREATADWDYDAVGGLTLGADP VATAIMHADGRDINAFVVRKEAKKHGMQRRIEGPDLTGKKVLVVEDTTTTGNSPLTAVAALREAGIEVVGVATVVDRATG ADEVIAAEGLPYRSLLGLSDLGLN
Sequences:
>Translated_184_residues MSSNSINAEARAELAELIKELAVVHGEVTLSSGKKADYYIDVRRATLHARASRLIGQLLREATADWDYDAVGGLTLGADP VATAIMHADGRDINAFVVRKEAKKHGMQRRIEGPDLTGKKVLVVEDTTTTGNSPLTAVAALREAGIEVVGVATVVDRATG ADEVIAAEGLPYRSLLGLSDLGLN >Mature_183_residues SSNSINAEARAELAELIKELAVVHGEVTLSSGKKADYYIDVRRATLHARASRLIGQLLREATADWDYDAVGGLTLGADPV ATAIMHADGRDINAFVVRKEAKKHGMQRRIEGPDLTGKKVLVVEDTTTTGNSPLTAVAALREAGIEVVGVATVVDRATGA DEVIAAEGLPYRSLLGLSDLGLN
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=180, Percent_Identity=31.1111111111111, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17508631, Length=158, Percent_Identity=32.9113924050633, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17554964, Length=173, Percent_Identity=28.9017341040462, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 19445; Mature: 19314
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNSINAEARAELAELIKELAVVHGEVTLSSGKKADYYIDVRRATLHARASRLIGQLLR CCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHH EATADWDYDAVGGLTLGADPVATAIMHADGRDINAFVVRKEAKKHGMQRRIEGPDLTGKK HHCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCE VLVVEDTTTTGNSPLTAVAALREAGIEVVGVATVVDRATGADEVIAAEGLPYRSLLGLSD EEEEECCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHCCCCCCCEEECCCCCHHHHHCCCC LGLN CCCC >Mature Secondary Structure SSNSINAEARAELAELIKELAVVHGEVTLSSGKKADYYIDVRRATLHARASRLIGQLLR CCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHH EATADWDYDAVGGLTLGADPVATAIMHADGRDINAFVVRKEAKKHGMQRRIEGPDLTGKK HHCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCE VLVVEDTTTTGNSPLTAVAALREAGIEVVGVATVVDRATGADEVIAAEGLPYRSLLGLSD EEEEECCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHCCCCCCCEEECCCCCHHHHHCCCC LGLN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA