| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62391606
Identifier: 62391606
GI number: 62391606
Start: 2928826
End: 2930043
Strand: Reverse
Name: 62391606
Synonym: cg3069
Alternate gene names: NA
Gene position: 2930043-2928826 (Counterclockwise)
Preceding gene: 62391607
Following gene: 62391605
Centisome position: 89.26
GC content: 54.43
Gene sequence:
>1218_bases GTGTTAGACAAATGGGTAAACAGAGCTGACCTAGCGGAATCCGCCATCAACGAAAGGCATTCCGCGAGGGTTTGGGGTCT GCCTCGAACAAATCTTGGGTTTGTGGCATGGCCATCCAACGCCAAAGAAAAACTGTTTATCCACTGGCACTACTGGTGGC AAGCGCATTATCTAGACTGCCTGGTGGATGCTGCTCGTCGACGCACCACAAAGGCCCGTCGCGACCGCATCAGGGACACC ATCCGCGGCATTTCGGTGCGCAATGTGGGCAAGCTGACCTCGAATCGTTATTACGACGACAAAGCTTGGCTGGCCCTTGC TCTTGGGCGTGCCGGAAAAGTGCGAAAGGTGCGCACACCAAAATCATTGCCCTCGTTGGAACAAAACATCGTCGATGGCA TTGATTCCCTTACTGGTGTGCTGCCGTGGCGTTCCGGCGAAACCTTCTACAACGTTCCCTCCAACGGTCCTGCTGCGATC ATGATGGCCCGCACCGACCGTTTGGACGAGGCTATGAAAATCACCGATTGGATTTTTGACAACCTGATCGATGGCGACGG CCTTGTGATGGACGGATTGCGCATGCGCATGCACGGACCTGAGCTTGTCCGTTCCATCCACCCGTATTGCCAAGGTGTCG CCATTGGTGCGTGTTTGGAAATTGCTCTCAAACTGCGTGAGCGCGCAGGCTTGACCACTACTGTGGTGGATCACTGGTCG GATGCCGATAAGGCAGAAGACTCCCTCAAATACTTTGCACACATCCACGCTGTGGTTCAGGCTGTGTCGCGGAAGATGAC CAACTTCCACGGCGTTATTGATTGGGACACCGGTGACGGCGACGGCGGTTTGTTCAAGGGCATTTTGGTCCGCTATTTAG CTGATGTGGCCATCCGCCTGCCTGACGATTCACCAACCAACCGGGAAACCAAAAAGATTGCAGCACGCCTGGTACTGGAA TCGGCGGAAAGCGTATGGAACCACCGATTGGAAGTTGATGGCCTTCCGGTATTCGCCACAGACTGGACAACGGATGCACG CCTGCCACAAAACTTTGGTTTGAGTTCCTCTAGTTTGAGCGATCTGGTGAGTGTTGTGCGCGTGGATGAACGTGATCTGT CCGTGCAATTGTCCGGTTGGATGCTCATGGAAGCAGCAGCGAAAGTGGCCGAAGAACTGGAAAACAACGGCAATAGTTAC ACCGGTCGCTCCCGATAG
Upstream 100 bases:
>100_bases AAGCCTGGTAATTTTATACCCTAGATCGTTAGACTTTCGTTATACTTTTGGGTGTCGTATTTAGTTGTACAACACCTGCA TTGGAGCGAAGAAACACTCA
Downstream 100 bases:
>100_bases CCCCGATAGTGTATGTGCTGACCTGCGTTTATGCATTTTCCTTAGGTTGAAGGAAATATCACACGACAAAAGTTGAGTGA TGCAGGCATAATTGGCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Alpha-1 6-Mannanase; Glycoside Hydrolase Family Protein; Glycoside Hydrolase; Glycosidase; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLDKWVNRADLAESAINERHSARVWGLPRTNLGFVAWPSNAKEKLFIHWHYWWQAHYLDCLVDAARRRTTKARRDRIRDT IRGISVRNVGKLTSNRYYDDKAWLALALGRAGKVRKVRTPKSLPSLEQNIVDGIDSLTGVLPWRSGETFYNVPSNGPAAI MMARTDRLDEAMKITDWIFDNLIDGDGLVMDGLRMRMHGPELVRSIHPYCQGVAIGACLEIALKLRERAGLTTTVVDHWS DADKAEDSLKYFAHIHAVVQAVSRKMTNFHGVIDWDTGDGDGGLFKGILVRYLADVAIRLPDDSPTNRETKKIAARLVLE SAESVWNHRLEVDGLPVFATDWTTDARLPQNFGLSSSSLSDLVSVVRVDERDLSVQLSGWMLMEAAAKVAEELENNGNSY TGRSR
Sequences:
>Translated_405_residues MLDKWVNRADLAESAINERHSARVWGLPRTNLGFVAWPSNAKEKLFIHWHYWWQAHYLDCLVDAARRRTTKARRDRIRDT IRGISVRNVGKLTSNRYYDDKAWLALALGRAGKVRKVRTPKSLPSLEQNIVDGIDSLTGVLPWRSGETFYNVPSNGPAAI MMARTDRLDEAMKITDWIFDNLIDGDGLVMDGLRMRMHGPELVRSIHPYCQGVAIGACLEIALKLRERAGLTTTVVDHWS DADKAEDSLKYFAHIHAVVQAVSRKMTNFHGVIDWDTGDGDGGLFKGILVRYLADVAIRLPDDSPTNRETKKIAARLVLE SAESVWNHRLEVDGLPVFATDWTTDARLPQNFGLSSSSLSDLVSVVRVDERDLSVQLSGWMLMEAAAKVAEELENNGNSY TGRSR >Mature_405_residues MLDKWVNRADLAESAINERHSARVWGLPRTNLGFVAWPSNAKEKLFIHWHYWWQAHYLDCLVDAARRRTTKARRDRIRDT IRGISVRNVGKLTSNRYYDDKAWLALALGRAGKVRKVRTPKSLPSLEQNIVDGIDSLTGVLPWRSGETFYNVPSNGPAAI MMARTDRLDEAMKITDWIFDNLIDGDGLVMDGLRMRMHGPELVRSIHPYCQGVAIGACLEIALKLRERAGLTTTVVDHWS DADKAEDSLKYFAHIHAVVQAVSRKMTNFHGVIDWDTGDGDGGLFKGILVRYLADVAIRLPDDSPTNRETKKIAARLVLE SAESVWNHRLEVDGLPVFATDWTTDARLPQNFGLSSSSLSDLVSVVRVDERDLSVQLSGWMLMEAAAKVAEELENNGNSY TGRSR
Specific function: Unknown
COG id: COG4833
COG function: function code G; Predicted glycosyl hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45550; Mature: 45550
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKWVNRADLAESAINERHSARVWGLPRTNLGFVAWPSNAKEKLFIHWHYWWQAHYLDC CCCHHCCHHHHHHHHHHHHHCCEEECCCCCCCCEEECCCCCCCEEEEEEEEHHHHHHHHH LVDAARRRTTKARRDRIRDTIRGISVRNVGKLTSNRYYDDKAWLALALGRAGKVRKVRTP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCCC KSLPSLEQNIVDGIDSLTGVLPWRSGETFYNVPSNGPAAIMMARTDRLDEAMKITDWIFD CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHH NLIDGDGLVMDGLRMRMHGPELVRSIHPYCQGVAIGACLEIALKLRERAGLTTTVVDHWS HHCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCC DADKAEDSLKYFAHIHAVVQAVSRKMTNFHGVIDWDTGDGDGGLFKGILVRYLADVAIRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEC PDDSPTNRETKKIAARLVLESAESVWNHRLEVDGLPVFATDWTTDARLPQNFGLSSSSLS CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCCCCCCCCCHHHHH DLVSVVRVDERDLSVQLSGWMLMEAAAKVAEELENNGNSYTGRSR HHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLDKWVNRADLAESAINERHSARVWGLPRTNLGFVAWPSNAKEKLFIHWHYWWQAHYLDC CCCHHCCHHHHHHHHHHHHHCCEEECCCCCCCCEEECCCCCCCEEEEEEEEHHHHHHHHH LVDAARRRTTKARRDRIRDTIRGISVRNVGKLTSNRYYDDKAWLALALGRAGKVRKVRTP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCCC KSLPSLEQNIVDGIDSLTGVLPWRSGETFYNVPSNGPAAIMMARTDRLDEAMKITDWIFD CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHH NLIDGDGLVMDGLRMRMHGPELVRSIHPYCQGVAIGACLEIALKLRERAGLTTTVVDHWS HHCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCC DADKAEDSLKYFAHIHAVVQAVSRKMTNFHGVIDWDTGDGDGGLFKGILVRYLADVAIRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEC PDDSPTNRETKKIAARLVLESAESVWNHRLEVDGLPVFATDWTTDARLPQNFGLSSSSLS CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCCCCCCCCCHHHHH DLVSVVRVDERDLSVQLSGWMLMEAAAKVAEELENNGNSYTGRSR HHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA