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The map label for this gene is cgtR6 [H]

Identifier: 62391600

GI number: 62391600

Start: 2922568

End: 2923188

Strand: Reverse

Name: cgtR6 [H]

Synonym: cg3061

Alternate gene names: 62391600

Gene position: 2923188-2922568 (Counterclockwise)

Preceding gene: 62391601

Following gene: 62391599

Centisome position: 89.05

GC content: 42.67

Gene sequence:

>621_bases
ATGCTTGGCCCGATTCAAGTTCTAATTGTTGATGATGAACCCTTTTTCATTAATGCACTTGAAACTTATTTTTCCACTAA
TGAGAACATCAATGTCGTCGCAACGGCAGAGAACGGCGTGCAAGCGCTAGACATTCTATCAAAGACTATCGTGGATGTGG
TGTTATGTGATGTTCGTATGCCACTTTTGAGCGGTGTGGAGTTGATGAAAATACTTGCTGAAAAGAAACTTACCTGCAGA
GTGCTAGCATTAACTTCTTTTCTAGATGATTATGCGATGCTCTCTATGCTTCAATTTGGGGCCTTTGGATTTTTACTCAA
AAGTGCCGACCGAGATGAGATAATAGAAGCTGTCCAATCAGCAGCTATGGGGGGAACTACCATCTCCCCTGAAATAGCAA
CAAATTTACGTAAATTTTTGTCGCAGCCTCCTTCCTCCATAAGTGATCTTCCGACCAGAGAGCGAGATGTTCTCACCCTT
CTTCATTTGGGGAAGAGTAATGCAGATATCGCTGCAGAGCTGAAATTATCGACAGTTTCAGTCAAAAAATCCGTTAGTCG
ATTGATGCAACGATTTCAGGTATCAAGTCGTCTGGAACTCGTAGCATCGACCCGACTTTGA

Upstream 100 bases:

>100_bases
AGTATTCACGTTTTACCCAGTTATGGCAGATCTTAAAATCAATGATATGAGCATAAATATACTGCGCTCACTCTTCCTTT
TTCATAGTTAGGATTCTCTC

Downstream 100 bases:

>100_bases
GAGGGGGCGATACACGCTTAACTTGAGATTCTTCATTACAGACTAATCACGCCCAGGGAGATGAAAGTAAAAAATGAAGA
AGGAGAAACTCTTCTCGTTA

Product: two component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLGPIQVLIVDDEPFFINALETYFSTNENINVVATAENGVQALDILSKTIVDVVLCDVRMPLLSGVELMKILAEKKLTCR
VLALTSFLDDYAMLSMLQFGAFGFLLKSADRDEIIEAVQSAAMGGTTISPEIATNLRKFLSQPPSSISDLPTRERDVLTL
LHLGKSNADIAAELKLSTVSVKKSVSRLMQRFQVSSRLELVASTRL

Sequences:

>Translated_206_residues
MLGPIQVLIVDDEPFFINALETYFSTNENINVVATAENGVQALDILSKTIVDVVLCDVRMPLLSGVELMKILAEKKLTCR
VLALTSFLDDYAMLSMLQFGAFGFLLKSADRDEIIEAVQSAAMGGTTISPEIATNLRKFLSQPPSSISDLPTRERDVLTL
LHLGKSNADIAAELKLSTVSVKKSVSRLMQRFQVSSRLELVASTRL
>Mature_206_residues
MLGPIQVLIVDDEPFFINALETYFSTNENINVVATAENGVQALDILSKTIVDVVLCDVRMPLLSGVELMKILAEKKLTCR
VLALTSFLDDYAMLSMLQFGAFGFLLKSADRDEIIEAVQSAAMGGTTISPEIATNLRKFLSQPPSSISDLPTRERDVLTL
LHLGKSNADIAAELKLSTVSVKKSVSRLMQRFQVSSRLELVASTRL

Specific function: Probable member of the two-component regulatory system NarS/NarL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=197, Percent_Identity=30.9644670050761, Blast_Score=97, Evalue=5e-22,
Organism=Escherichia coli, GI1790102, Length=197, Percent_Identity=34.010152284264, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787473, Length=200, Percent_Identity=29.5, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI1788222, Length=199, Percent_Identity=26.6331658291457, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786747, Length=207, Percent_Identity=28.0193236714976, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788712, Length=196, Percent_Identity=25, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22565; Mature: 22565

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGPIQVLIVDDEPFFINALETYFSTNENINVVATAENGVQALDILSKTIVDVVLCDVRM
CCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
PLLSGVELMKILAEKKLTCRVLALTSFLDDYAMLSMLQFGAFGFLLKSADRDEIIEAVQS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AAMGGTTISPEIATNLRKFLSQPPSSISDLPTRERDVLTLLHLGKSNADIAAELKLSTVS
HHCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHH
VKKSVSRLMQRFQVSSRLELVASTRL
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLGPIQVLIVDDEPFFINALETYFSTNENINVVATAENGVQALDILSKTIVDVVLCDVRM
CCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
PLLSGVELMKILAEKKLTCRVLALTSFLDDYAMLSMLQFGAFGFLLKSADRDEIIEAVQS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AAMGGTTISPEIATNLRKFLSQPPSSISDLPTRERDVLTLLHLGKSNADIAAELKLSTVS
HHCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHH
VKKSVSRLMQRFQVSSRLELVASTRL
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]