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The map label for this gene is tnp8b(ISCg8a) [H]

Identifier: 62391597

GI number: 62391597

Start: 2920001

End: 2920897

Strand: Reverse

Name: tnp8b(ISCg8a) [H]

Synonym: cg3058

Alternate gene names: 62391597

Gene position: 2920897-2920001 (Counterclockwise)

Preceding gene: 62391598

Following gene: 62391596

Centisome position: 88.98

GC content: 51.62

Gene sequence:

>897_bases
GTGAGCTGCTTCCGGTTTGTTGACGACGTGCGAAAAACCTATCCGGTTAAGCGGTTATGCGAAGTGTTGAAAATCAACCG
CTCCTCGTACTACAAATGGAAAAAGACTGCCCCGACCAGGAGCAACCGCCTGCTCAGCGACGCAGTCTTAGGAGCGAAGA
TCAAGTCCATCTTCACGAAAGAACGCGGCTGCTACGGCTCAAAACGCATCACGGCTGAGCTCAACGATGATCCTGGCAGC
ACTCCGGTTAACCATAAACGAGTCGCCCGGATCATGGCATCATTAAAGCTGTTTGGTTTCACGAAGAAACGCAGGGTCAT
CACGACCGTGTCTGATAAAAAGAAGCCTGTCTTCCCTGACCTGGTCAAACGTCATTTTAACGCACTAGCAGCAAATGAAG
TTTACGTCGGGGATATTACTTACCTACCGATCGCAGATGGCACGAACATGTATCTGGCTACGGTCATTGATTGCTATTCC
CGTAGGCTGGTGGGTTTTGCGATTGCGGATCATATGCGCACGTCATTGGTGCAGGAGGCATTGCTGATGGCGAAGAGTCA
GCGAGGCAGCCTGAAGGGTGCGGTGTTTCATTCGGATCACGGCAGTGTGTACACCTCGCAGGCGTTTCAGGACACTTGTA
AAAAGTTGGGTGTTCGTCAGTCGATGGGTGCTGTTGGTACCAGTGCGGATAATTCGCTGGCGGAGTCGTTTAATGCCGCC
CTCAAGCGAGAGGTGCTGCAGGATTCCAAGACGTTTGCCAATCAGTTGGTGTGCCGCCGGGAGGTATTTCGCTGGTGTAC
CAGGTACAGCACAAATCGCAGGCATTCTTGGTGTGGCTATGTGGTGCCTGCGGTGTTCGAGAGTAGAAATTTAGCTATTC
TGAAATCTGTTTCCTGA

Upstream 100 bases:

>100_bases
GAACAAATCCGGCAGCTGAAGAAGGAAAACGCGCTACAACGCGCAAGAACGCGACATCCTGCGGAAAGCTGCTAAATATT
TCCCGGCAAGAGACAAACTG

Downstream 100 bases:

>100_bases
TTAAATCGCCTGTGTTTCCAGGGGGCAGGTCCCAATCTTCGGGACCGTGACCATAGTTTAGAGTCAGTCAACAACCCTAG
TGAGTTAGATCAGTGATTAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSCFRFVDDVRKTYPVKRLCEVLKINRSSYYKWKKTAPTRSNRLLSDAVLGAKIKSIFTKERGCYGSKRITAELNDDPGS
TPVNHKRVARIMASLKLFGFTKKRRVITTVSDKKKPVFPDLVKRHFNALAANEVYVGDITYLPIADGTNMYLATVIDCYS
RRLVGFAIADHMRTSLVQEALLMAKSQRGSLKGAVFHSDHGSVYTSQAFQDTCKKLGVRQSMGAVGTSADNSLAESFNAA
LKREVLQDSKTFANQLVCRREVFRWCTRYSTNRRHSWCGYVVPAVFESRNLAILKSVS

Sequences:

>Translated_298_residues
MSCFRFVDDVRKTYPVKRLCEVLKINRSSYYKWKKTAPTRSNRLLSDAVLGAKIKSIFTKERGCYGSKRITAELNDDPGS
TPVNHKRVARIMASLKLFGFTKKRRVITTVSDKKKPVFPDLVKRHFNALAANEVYVGDITYLPIADGTNMYLATVIDCYS
RRLVGFAIADHMRTSLVQEALLMAKSQRGSLKGAVFHSDHGSVYTSQAFQDTCKKLGVRQSMGAVGTSADNSLAESFNAA
LKREVLQDSKTFANQLVCRREVFRWCTRYSTNRRHSWCGYVVPAVFESRNLAILKSVS
>Mature_297_residues
SCFRFVDDVRKTYPVKRLCEVLKINRSSYYKWKKTAPTRSNRLLSDAVLGAKIKSIFTKERGCYGSKRITAELNDDPGST
PVNHKRVARIMASLKLFGFTKKRRVITTVSDKKKPVFPDLVKRHFNALAANEVYVGDITYLPIADGTNMYLATVIDCYSR
RLVGFAIADHMRTSLVQEALLMAKSQRGSLKGAVFHSDHGSVYTSQAFQDTCKKLGVRQSMGAVGTSADNSLAESFNAAL
KREVLQDSKTFANQLVCRREVFRWCTRYSTNRRHSWCGYVVPAVFESRNLAILKSVS

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=245, Percent_Identity=33.0612244897959, Blast_Score=130, Evalue=2e-30,
Organism=Escherichia coli, GI1788405, Length=291, Percent_Identity=34.020618556701, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1787263, Length=291, Percent_Identity=34.020618556701, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1786753, Length=291, Percent_Identity=34.020618556701, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1786570, Length=291, Percent_Identity=34.020618556701, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1786490, Length=291, Percent_Identity=34.020618556701, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1789981, Length=241, Percent_Identity=27.8008298755187, Blast_Score=110, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 33606; Mature: 33475

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCFRFVDDVRKTYPVKRLCEVLKINRSSYYKWKKTAPTRSNRLLSDAVLGAKIKSIFTK
CCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
ERGCYGSKRITAELNDDPGSTPVNHKRVARIMASLKLFGFTKKRRVITTVSDKKKPVFPD
HCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH
LVKRHFNALAANEVYVGDITYLPIADGTNMYLATVIDCYSRRLVGFAIADHMRTSLVQEA
HHHHHHHHHHCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMAKSQRGSLKGAVFHSDHGSVYTSQAFQDTCKKLGVRQSMGAVGTSADNSLAESFNAA
HHHHHHCCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH
LKREVLQDSKTFANQLVCRREVFRWCTRYSTNRRHSWCGYVVPAVFESRNLAILKSVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure 
SCFRFVDDVRKTYPVKRLCEVLKINRSSYYKWKKTAPTRSNRLLSDAVLGAKIKSIFTK
CHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
ERGCYGSKRITAELNDDPGSTPVNHKRVARIMASLKLFGFTKKRRVITTVSDKKKPVFPD
HCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH
LVKRHFNALAANEVYVGDITYLPIADGTNMYLATVIDCYSRRLVGFAIADHMRTSLVQEA
HHHHHHHHHHCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMAKSQRGSLKGAVFHSDHGSVYTSQAFQDTCKKLGVRQSMGAVGTSADNSLAESFNAA
HHHHHHCCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH
LKREVLQDSKTFANQLVCRREVFRWCTRYSTNRRHSWCGYVVPAVFESRNLAILKSVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]