| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is nagA1 [H]
Identifier: 62391484
GI number: 62391484
Start: 2787387
End: 2788553
Strand: Reverse
Name: nagA1 [H]
Synonym: cg2929
Alternate gene names: 62391484
Gene position: 2788553-2787387 (Counterclockwise)
Preceding gene: 62391488
Following gene: 62391483
Centisome position: 84.95
GC content: 53.56
Gene sequence:
>1167_bases ATGGCAGAAGTGGTGCATTATCAAGAAAATGCAGGTCAAGCAGTTAAAAAAATTGAAGGAAGAATTGTTACCCCCCACGG GGTGATTGATGGCTTTCTCCAACTCGAAAACGGCATCATCACGGAACTCTCTGGAGAACCAGCACCTAAAAACGCAGGAT TCCACCCCGAACTCCCCACGATTGTTCCCAGTTTTATTGATCTTCATAATCACGGTGGAAACGGTGGCGCGTTTCCTACG GGAACGCAGGACCAGGCGAGGAATGCCGCGCAGTATCACCGCGAACATGGCACGACCGTGATGTTGGCAAGCATGGTTTC GGCGCCGGCTGACGCACTGGCAGCGCAGGTGGAAAACCTTATTCCCTTGTGTGAAGAGGGCCTGCTGTGCGGCATTCACC TCGAGGGTCCTTTCATCAACGCATGCCGTTGTGGTGCTCAAAACCCGGATTTTATTTTTCCCGGCAACCCAACAGATCTT GCCCAGGTGATCCATGCGGGAAAAGGTTGGATCAAATCGATCACAGTAGCGCCGGAAACTGACAATCTTACTGAGCTTCT CGATCTCTGCGCAGCGCACCACATCATTGCTTCCTTCGGGCACACTGATGCAGATTTTGATACCACTACCAGCGCAATTG CCTTGGCTAAAGAGAAAAATGTGACGGTCACGGCTACGCATTTGTTCAATGCGATGCCTCCGCTGCATCATAGGGATCCC GGCAGCGTGGGCGCTTTGCTTGCTGCGGCACGTGCCGGGGACGCATATGTTGAGTTGATCGCCGACGGCGTGCATTTGGC CGATGGAACGGTCGATCTAGCTCGTTCCAACAACGCCTTTTTCATCACGGACGCCATGGAAGCCGCCGGAATGCCAGACG GTGAGTACATTTTGGGCGTTTTGAACGTCACCGTCACCGATGGCGTCGCCCGTCTGCGCGATGGCGGCGCCATCGCCGGG GGTACCAGCACACTAGCGAGTCAGTTCGTGCACCACGTGCGCAGGGGTATGACGCTTATCGACGCGACCCTCCACACCTC AACCGTCGCCGCCAAAATTCTCGGACTTAGCGATCACGAAATCGTTAAATCCAACCCTGTAAATTTTGTGGTCTTTGACT CAAACGGCCAGTTACAACAGGTCCATTTAGACCATCAAGTAATTTAA
Upstream 100 bases:
>100_bases AACAGCAGGCCTCAAGTCCGAAGATAATTAACCTAAATCCGTAGACATAAGACATCATACGTCCTATGCTTGCTGGAAGG AAGCAAATAACCTCAGAAAG
Downstream 100 bases:
>100_bases ATACGAGCAAAACTTTCCTGATAATAAAAGGAGTCCGACCATGGACATCATCATCTGCAAAGACGAGCAAGAAGTCGGCA AAGCAGCGGCAGCCCTGATC
Product: N-acetylglucosamine-6-phosphate deacetylase
Products: NA
Alternate protein names: GlcNAc 6-P deacetylase [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MAEVVHYQENAGQAVKKIEGRIVTPHGVIDGFLQLENGIITELSGEPAPKNAGFHPELPTIVPSFIDLHNHGGNGGAFPT GTQDQARNAAQYHREHGTTVMLASMVSAPADALAAQVENLIPLCEEGLLCGIHLEGPFINACRCGAQNPDFIFPGNPTDL AQVIHAGKGWIKSITVAPETDNLTELLDLCAAHHIIASFGHTDADFDTTTSAIALAKEKNVTVTATHLFNAMPPLHHRDP GSVGALLAAARAGDAYVELIADGVHLADGTVDLARSNNAFFITDAMEAAGMPDGEYILGVLNVTVTDGVARLRDGGAIAG GTSTLASQFVHHVRRGMTLIDATLHTSTVAAKILGLSDHEIVKSNPVNFVVFDSNGQLQQVHLDHQVI
Sequences:
>Translated_388_residues MAEVVHYQENAGQAVKKIEGRIVTPHGVIDGFLQLENGIITELSGEPAPKNAGFHPELPTIVPSFIDLHNHGGNGGAFPT GTQDQARNAAQYHREHGTTVMLASMVSAPADALAAQVENLIPLCEEGLLCGIHLEGPFINACRCGAQNPDFIFPGNPTDL AQVIHAGKGWIKSITVAPETDNLTELLDLCAAHHIIASFGHTDADFDTTTSAIALAKEKNVTVTATHLFNAMPPLHHRDP GSVGALLAAARAGDAYVELIADGVHLADGTVDLARSNNAFFITDAMEAAGMPDGEYILGVLNVTVTDGVARLRDGGAIAG GTSTLASQFVHHVRRGMTLIDATLHTSTVAAKILGLSDHEIVKSNPVNFVVFDSNGQLQQVHLDHQVI >Mature_387_residues AEVVHYQENAGQAVKKIEGRIVTPHGVIDGFLQLENGIITELSGEPAPKNAGFHPELPTIVPSFIDLHNHGGNGGAFPTG TQDQARNAAQYHREHGTTVMLASMVSAPADALAAQVENLIPLCEEGLLCGIHLEGPFINACRCGAQNPDFIFPGNPTDLA QVIHAGKGWIKSITVAPETDNLTELLDLCAAHHIIASFGHTDADFDTTTSAIALAKEKNVTVTATHLFNAMPPLHHRDPG SVGALLAAARAGDAYVELIADGVHLADGTVDLARSNNAFFITDAMEAAGMPDGEYILGVLNVTVTDGVARLRDGGAIAGG TSTLASQFVHHVRRGMTLIDATLHTSTVAAKILGLSDHEIVKSNPVNFVVFDSNGQLQQVHLDHQVI
Specific function: N-acetylglucosamine utilization. [C]
COG id: COG1820
COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nagA family [H]
Homologues:
Organism=Homo sapiens, GI21361513, Length=266, Percent_Identity=32.7067669172932, Blast_Score=99, Evalue=9e-21, Organism=Homo sapiens, GI224922791, Length=266, Percent_Identity=32.7067669172932, Blast_Score=98, Evalue=1e-20, Organism=Escherichia coli, GI1786892, Length=345, Percent_Identity=24.9275362318841, Blast_Score=82, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17553768, Length=335, Percent_Identity=28.6567164179104, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI19920392, Length=277, Percent_Identity=30.6859205776173, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI281361140, Length=290, Percent_Identity=29.6551724137931, Blast_Score=96, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR003764 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.1.25 [H]
Molecular weight: Translated: 40905; Mature: 40773
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVVHYQENAGQAVKKIEGRIVTPHGVIDGFLQLENGIITELSGEPAPKNAGFHPELPT CCCEEEEHHHHHHHHHHHCCEEECCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHH IVPSFIDLHNHGGNGGAFPTGTQDQARNAAQYHREHGTTVMLASMVSAPADALAAQVENL HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHCCHHHHHHHHHHH IPLCEEGLLCGIHLEGPFINACRCGAQNPDFIFPGNPTDLAQVIHAGKGWIKSITVAPET HHHHCCCCEEEEEECCCCCHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEECCCC DNLTELLDLCAAHHIIASFGHTDADFDTTTSAIALAKEKNVTVTATHLFNAMPPLHHRDP CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCEEEEHHHHHHCCCCCCCCCC GSVGALLAAARAGDAYVELIADGVHLADGTVDLARSNNAFFITDAMEAAGMPDGEYILGV CHHHHHHHHHHCCHHHHHHHHCCEEECCCCEEEEECCCEEEEEECHHHCCCCCCCEEEEE LNVTVTDGVARLRDGGAIAGGTSTLASQFVHHVRRGMTLIDATLHTSTVAAKILGLSDHE EEEEEHHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCC IVKSNPVNFVVFDSNGQLQQVHLDHQVI HHCCCCCEEEEECCCCCEEEEECCCCCC >Mature Secondary Structure AEVVHYQENAGQAVKKIEGRIVTPHGVIDGFLQLENGIITELSGEPAPKNAGFHPELPT CCEEEEHHHHHHHHHHHCCEEECCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHH IVPSFIDLHNHGGNGGAFPTGTQDQARNAAQYHREHGTTVMLASMVSAPADALAAQVENL HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHCCHHHHHHHHHHH IPLCEEGLLCGIHLEGPFINACRCGAQNPDFIFPGNPTDLAQVIHAGKGWIKSITVAPET HHHHCCCCEEEEEECCCCCHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEECCCC DNLTELLDLCAAHHIIASFGHTDADFDTTTSAIALAKEKNVTVTATHLFNAMPPLHHRDP CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCEEEEHHHHHHCCCCCCCCCC GSVGALLAAARAGDAYVELIADGVHLADGTVDLARSNNAFFITDAMEAAGMPDGEYILGV CHHHHHHHHHHCCHHHHHHHHCCEEECCCCEEEEECCCEEEEEECHHHCCCCCCCEEEEE LNVTVTDGVARLRDGGAIAGGTSTLASQFVHHVRRGMTLIDATLHTSTVAAKILGLSDHE EEEEEHHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCC IVKSNPVNFVVFDSNGQLQQVHLDHQVI HHCCCCCEEEEECCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]