| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is hemH [H]
Identifier: 62391435
GI number: 62391435
Start: 2735090
End: 2735983
Strand: Reverse
Name: hemH [H]
Synonym: cg2874
Alternate gene names: 62391435
Gene position: 2735983-2735090 (Counterclockwise)
Preceding gene: 62391436
Following gene: 62391434
Centisome position: 83.35
GC content: 53.24
Gene sequence:
>894_bases ATGCGTCCTGAACTCTCCCAGTACAAGCACCTGTCGGCAGGCAAGGTCCGTGAGATCTACGAGATCGACGACAAGCACAT CCTCATGGTGGCTTCCGATCGTATCTCTGCATACGATTTCATCCTCGATACCGAAATTCCAGACAAGGGTCGAGTGCTCA CTGCGATGAGCCAGTTCTTCTTCGACACCATCGATTTTCCTAATCACCTTGCAGGTCCCGCTGATGATCCACGTATCCCA GAAGAAGTTTTGGGACGAGCAATGGTGTGCAAGAAGCTCAACATGCTTCCTTTTGAATGCGTGGTTCGTGGATACCTCAC TGGCTCTGGACTTGTTGAATACAAGCAGACCAGCTCCGTGTGTGGAGTTGAGCTCCCAGAAGGCCTCGTTGAATCTTCTC AGCTGCCTGAGCCAATCTTTACCCCAGCCACCAAGGCTGACATCGGCGACCACGACATCAATGTCTCCTTTGACGTTGTT GAAGAACGTCTCGGCGAAGCTCGTGCGAACCAGTTGCGCGATGCCTCTATTGCTATTTACAAGGCTGCTGCTGAGATCGC CCGTGACCGTGGCGTCATCCTTGCCGACACCAAATTTGAGTTCGGCATCGATGAAGATGGCACCCTCGTGCTTGGTGATG AAGTCCTTACCCCAGATTCCTCCCGCTACTGGCCTTTGGAAGGCTATGAAGCAGGATCTGTGCAACCAAGCTTTGATAAG CAATTCGTGCGCAACTGGCTCACCGGCCCTAAATCTGGCTGGGACAAGGATTCCGGCTTGGAGCCACCAGCTCTGCCAGG TTCCGTTGTTGAGGCAACCCGCGAGCGCTACATCGAGGCCTACGAGCTGATTTCTGGTCAGAAGTTCTGCCAGTGGATTG GTTCTTGCGTCTAA
Upstream 100 bases:
>100_bases GGTGATCCATGTCAGGAAGCCAGCGGTGAAACCGGCAGTGAAACCAGCGGTGAATGCTAAAATTTTCCGAACACACCCGA GGGGTCTAGACTTGCCTAAC
Downstream 100 bases:
>100_bases GCTGCTTGATTTTCCCTAAACCCCGGATTCTTAAATGAATCCGGGTTTTTCAGTTTCGGGGTGCAAATCAGAATGTCGCC AATGGCGAACACACGAGCGT
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MRPELSQYKHLSAGKVREIYEIDDKHILMVASDRISAYDFILDTEIPDKGRVLTAMSQFFFDTIDFPNHLAGPADDPRIP EEVLGRAMVCKKLNMLPFECVVRGYLTGSGLVEYKQTSSVCGVELPEGLVESSQLPEPIFTPATKADIGDHDINVSFDVV EERLGEARANQLRDASIAIYKAAAEIARDRGVILADTKFEFGIDEDGTLVLGDEVLTPDSSRYWPLEGYEAGSVQPSFDK QFVRNWLTGPKSGWDKDSGLEPPALPGSVVEATRERYIEAYELISGQKFCQWIGSCV
Sequences:
>Translated_297_residues MRPELSQYKHLSAGKVREIYEIDDKHILMVASDRISAYDFILDTEIPDKGRVLTAMSQFFFDTIDFPNHLAGPADDPRIP EEVLGRAMVCKKLNMLPFECVVRGYLTGSGLVEYKQTSSVCGVELPEGLVESSQLPEPIFTPATKADIGDHDINVSFDVV EERLGEARANQLRDASIAIYKAAAEIARDRGVILADTKFEFGIDEDGTLVLGDEVLTPDSSRYWPLEGYEAGSVQPSFDK QFVRNWLTGPKSGWDKDSGLEPPALPGSVVEATRERYIEAYELISGQKFCQWIGSCV >Mature_297_residues MRPELSQYKHLSAGKVREIYEIDDKHILMVASDRISAYDFILDTEIPDKGRVLTAMSQFFFDTIDFPNHLAGPADDPRIP EEVLGRAMVCKKLNMLPFECVVRGYLTGSGLVEYKQTSSVCGVELPEGLVESSQLPEPIFTPATKADIGDHDINVSFDVV EERLGEARANQLRDASIAIYKAAAEIARDRGVILADTKFEFGIDEDGTLVLGDEVLTPDSSRYWPLEGYEAGSVQPSFDK QFVRNWLTGPKSGWDKDSGLEPPALPGSVVEATRERYIEAYELISGQKFCQWIGSCV
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=297, Percent_Identity=42.4242424242424, Blast_Score=249, Evalue=5e-67, Organism=Drosophila melanogaster, GI18860083, Length=242, Percent_Identity=24.3801652892562, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24583917, Length=222, Percent_Identity=23.4234234234234, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 32991; Mature: 32991
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS01057 SAICAR_SYNTHETASE_1 ; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPELSQYKHLSAGKVREIYEIDDKHILMVASDRISAYDFILDTEIPDKGRVLTAMSQFF CCCCHHHHHCCCCCCHHHHEECCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHH FDTIDFPNHLAGPADDPRIPEEVLGRAMVCKKLNMLPFECVVRGYLTGSGLVEYKQTSSV HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCC CGVELPEGLVESSQLPEPIFTPATKADIGDHDINVSFDVVEERLGEARANQLRDASIAIY CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KAAAEIARDRGVILADTKFEFGIDEDGTLVLGDEVLTPDSSRYWPLEGYEAGSVQPSFDK HHHHHHHHCCCEEEECCCEEECCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCHHH QFVRNWLTGPKSGWDKDSGLEPPALPGSVVEATRERYIEAYELISGQKFCQWIGSCV HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRPELSQYKHLSAGKVREIYEIDDKHILMVASDRISAYDFILDTEIPDKGRVLTAMSQFF CCCCHHHHHCCCCCCHHHHEECCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHH FDTIDFPNHLAGPADDPRIPEEVLGRAMVCKKLNMLPFECVVRGYLTGSGLVEYKQTSSV HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCC CGVELPEGLVESSQLPEPIFTPATKADIGDHDINVSFDVVEERLGEARANQLRDASIAIY CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KAAAEIARDRGVILADTKFEFGIDEDGTLVLGDEVLTPDSSRYWPLEGYEAGSVQPSFDK HHHHHHHHCCCEEEECCCEEECCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCHHH QFVRNWLTGPKSGWDKDSGLEPPALPGSVVEATRERYIEAYELISGQKFCQWIGSCV HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA