| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is pstS [H]
Identifier: 62391413
GI number: 62391413
Start: 2708082
End: 2709209
Strand: Reverse
Name: pstS [H]
Synonym: cg2846
Alternate gene names: 62391413
Gene position: 2709209-2708082 (Counterclockwise)
Preceding gene: 62391414
Following gene: 62391412
Centisome position: 82.53
GC content: 57.45
Gene sequence:
>1128_bases GTGAACCTCACTCTTAAGCGCTCCATCGCCCTTGTGGGCGCAGTTACTGCAGGCTCCTTCGCTCTTGTAGCTTGCTCCGA CTCCAATGAGTCTGATTCCACCTCCTCATCTGCAGCTTCCACCGGTTCTTCCGATGCTGCATCCATTGAGGGCCTTTCCG GTGTTACCGGTCAGCTCGTTGCTGAAGGTGCATCTTCCCAGCAGTCCGCAATGGACTACTTTGGTATCCGTTACTCCGAG GCTGTCAGCGGTGCATCTCTGGCTTACACCCCTTCAGGTTCCGGTTCCGGCCGCACCAACTTCGCTGCAGGCCAGGTTGC TTTCGGTGGCTCCGACTCCGCAATGAAGGACGACCAGGCTGCAGAAGCAGAAGCACGTTGCAACGGCAACGAAGCATGGC ACCTGCCATTCGTTATCGGCCCAGTTGCAGTTGCTTACAACCTGCCTGGCGTTGACACCCTGAACCTGGACACCAACATC ATCGCTCAGATCTTCAAGGGCGAGATCACCAAGTGGAACGACGAAGCAATCGCTTCCCAGAACGAGGGCACCGACCTCCC AGACCAGGACATCTCCGTTCTGTACCGTTCCGAAGAGTCCGGTACCTCCGACAACTTCCAGAAGTTCCTCGGAGCTTCCA CCGACATCTGGGAGACCGAAGGCCAGCAGTTCCCAACCGAGGTTGGCTCCGGTGCGCAGGGCTCCAACGGTGTAGCTTCT GAGGCTTCCAACATCGAGGGTGCAATCACCTACGTTGAAGCTGGTTTCGCTAACCAGTCCGGCCTGGGCGTTGCAAACAT CGACTTCGGTTCCGGCCCAGTTGAACTCAACGCTGAGTCCGTTGGCGTTGCACTTGGTGCACTCGACTTCCTGACTGAGG GCCACAACATGGTTGTTGACACCGACGCTATGTTCGCAATGAACGAAGCCGGTGCTTACCCACTGATCCTCACCACCTAC GAAATCGTCTGCTCCGCAGGCTACGACGAGACCACCCGCGACCAGGTCAAGGACTTCCTGACCGTTGCACTGGACTCCCA GGATGACCAGCTCGAGGCTCTCGGCTACATCCCAGTTACCGGCGAGCACTACGATCGCCTCGTTGCAGCAGTTGAAGCAA TTCAGTAA
Upstream 100 bases:
>100_bases AGGTCTTAGGTTTTTAAGTCGTGAGCAATCCGGAGGGAAACTAGCCCGCCTACAGGATCTGCTCAGACGATGTCTTCACT TAAACCGGAAAGGCTTCCCC
Downstream 100 bases:
>100_bases TAAACCGCTGCCGTAGCTTCACGAAACCAGTGTGAAGTTGCACTTTAAGTGAATCGGGCGCCCTCTCCCAGCAATTGGGG GTAGGGCGCCCGATTTTCCT
Product: ABC-type phosphate transport system, component
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP 3; PstS-3 [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MNLTLKRSIALVGAVTAGSFALVACSDSNESDSTSSSAASTGSSDAASIEGLSGVTGQLVAEGASSQQSAMDYFGIRYSE AVSGASLAYTPSGSGSGRTNFAAGQVAFGGSDSAMKDDQAAEAEARCNGNEAWHLPFVIGPVAVAYNLPGVDTLNLDTNI IAQIFKGEITKWNDEAIASQNEGTDLPDQDISVLYRSEESGTSDNFQKFLGASTDIWETEGQQFPTEVGSGAQGSNGVAS EASNIEGAITYVEAGFANQSGLGVANIDFGSGPVELNAESVGVALGALDFLTEGHNMVVDTDAMFAMNEAGAYPLILTTY EIVCSAGYDETTRDQVKDFLTVALDSQDDQLEALGYIPVTGEHYDRLVAAVEAIQ
Sequences:
>Translated_375_residues MNLTLKRSIALVGAVTAGSFALVACSDSNESDSTSSSAASTGSSDAASIEGLSGVTGQLVAEGASSQQSAMDYFGIRYSE AVSGASLAYTPSGSGSGRTNFAAGQVAFGGSDSAMKDDQAAEAEARCNGNEAWHLPFVIGPVAVAYNLPGVDTLNLDTNI IAQIFKGEITKWNDEAIASQNEGTDLPDQDISVLYRSEESGTSDNFQKFLGASTDIWETEGQQFPTEVGSGAQGSNGVAS EASNIEGAITYVEAGFANQSGLGVANIDFGSGPVELNAESVGVALGALDFLTEGHNMVVDTDAMFAMNEAGAYPLILTTY EIVCSAGYDETTRDQVKDFLTVALDSQDDQLEALGYIPVTGEHYDRLVAAVEAIQ >Mature_375_residues MNLTLKRSIALVGAVTAGSFALVACSDSNESDSTSSSAASTGSSDAASIEGLSGVTGQLVAEGASSQQSAMDYFGIRYSE AVSGASLAYTPSGSGSGRTNFAAGQVAFGGSDSAMKDDQAAEAEARCNGNEAWHLPFVIGPVAVAYNLPGVDTLNLDTNI IAQIFKGEITKWNDEAIASQNEGTDLPDQDISVLYRSEESGTSDNFQKFLGASTDIWETEGQQFPTEVGSGAQGSNGVAS EASNIEGAITYVEAGFANQSGLGVANIDFGSGPVELNAESVGVALGALDFLTEGHNMVVDTDAMFAMNEAGAYPLILTTY EIVCSAGYDETTRDQVKDFLTVALDSQDDQLEALGYIPVTGEHYDRLVAAVEAIQ
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=282, Percent_Identity=30.1418439716312, Blast_Score=108, Evalue=5e-25,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 38788; Mature: 38788
Theoretical pI: Translated: 3.65; Mature: 3.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTLKRSIALVGAVTAGSFALVACSDSNESDSTSSSAASTGSSDAASIEGLSGVTGQLV CCEEHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHH AEGASSQQSAMDYFGIRYSEAVSGASLAYTPSGSGSGRTNFAAGQVAFGGSDSAMKDDQA HCCCCCHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHH AEAEARCNGNEAWHLPFVIGPVAVAYNLPGVDTLNLDTNIIAQIFKGEITKWNDEAIASQ HHHHHHCCCCCEEECCEEECCEEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCHHHCCC NEGTDLPDQDISVLYRSEESGTSDNFQKFLGASTDIWETEGQQFPTEVGSGAQGSNGVAS CCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC EASNIEGAITYVEAGFANQSGLGVANIDFGSGPVELNAESVGVALGALDFLTEGHNMVVD CCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCEEECHHHHHHHHHHHHHHHCCCCEEEE TDAMFAMNEAGAYPLILTTYEIVCSAGYDETTRDQVKDFLTVALDSQDDQLEALGYIPVT CCHHEEECCCCCCEEEEEEEEHHEECCCCCCHHHHHHHHHEEEECCCCCCEEEEEEEECC GEHYDRLVAAVEAIQ CHHHHHHHHHHHHCC >Mature Secondary Structure MNLTLKRSIALVGAVTAGSFALVACSDSNESDSTSSSAASTGSSDAASIEGLSGVTGQLV CCEEHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHH AEGASSQQSAMDYFGIRYSEAVSGASLAYTPSGSGSGRTNFAAGQVAFGGSDSAMKDDQA HCCCCCHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHH AEAEARCNGNEAWHLPFVIGPVAVAYNLPGVDTLNLDTNIIAQIFKGEITKWNDEAIASQ HHHHHHCCCCCEEECCEEECCEEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCHHHCCC NEGTDLPDQDISVLYRSEESGTSDNFQKFLGASTDIWETEGQQFPTEVGSGAQGSNGVAS CCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC EASNIEGAITYVEAGFANQSGLGVANIDFGSGPVELNAESVGVALGALDFLTEGHNMVVD CCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCEEECHHHHHHHHHHHHHHHCCCCEEEE TDAMFAMNEAGAYPLILTTYEIVCSAGYDETTRDQVKDFLTVALDSQDDQLEALGYIPVT CCHHEEECCCCCCEEEEEEEEHHEECCCCCCHHHHHHHHHEEEECCCCCCEEEEEEEECC GEHYDRLVAAVEAIQ CHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA