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The map label for this gene is tnp11a(ISCg11a)

Identifier: 62391387

GI number: 62391387

Start: 2666991

End: 2667440

Strand: Reverse

Name: tnp11a(ISCg11a)

Synonym: cg2807

Alternate gene names: NA

Gene position: 2667440-2666991 (Counterclockwise)

Preceding gene: 62391389

Following gene: 62391380

Centisome position: 81.26

GC content: 50.0

Gene sequence:

>450_bases
TTGATTCTTCCAGTTCAGGAGGGCATTTCCTATTTTCCCACGCCGTTACACCTGAATCACATCGGTGGATCCAGGTTTAA
GAAGTTCCTGGTCAAGATCGACAAGACTGTTCCCCAGGACCTTGATGTTCATGTTATTTGTGACAACTACGCCACGCATA
AACACCCGACCATCAATACCTGGTTGGTCAAGCATCCACGGTTTCACATGCACTTCACCCCGACGTATTCGTCCTGGATC
AACCAGGTTGAACGGTTGTTCGCTGAGGTGACCCGGGAGTTACTCCAGCGTTCTGATCATCGGAGTGTCCAGGCCCTGGA
GAAAGATTTACGCAACTGGGTGAAAGCATGGAACGAGGATCCTAAGCCGTTTATCTGGACCAAAACCGCGGAGGAGATCC
TTTCCTCTATCGCCCGATACTTAAAACGAATTAACGGCGCAGGACACTAG

Upstream 100 bases:

>100_bases
GGTTGGGGTCATCAAAGGATGCGGACATCGCTGTGGGGTTGTGTAATAATTGCACCTGTGAGGTGCCTTTCTGGCAGGTG
AATCAGGACTCTAAGCAAGC

Downstream 100 bases:

>100_bases
CAGCAGCGTAAGAAGAAAAGTCAATCAAGCTGTCTCAAAAACTTGACGAGCGCGAGTAGCGCTTCAGGCTAATTAACACT
TCGGATAGAAAGATACCGCT

Product: transposase-fragment

Products: NA

Alternate protein names: Integrase Catalytic Region; ISRSO5-Transposase Protein; ISMsm2 Transposase; Feruloyl Esterase; Isrso5-Transposase Protein; ISMsm5 Transposase; Integrase Catalytic Subunit; Aminoglycoside Phosphotransferase; ISPsy1 Transposase; Transposase-Fragment; ISPsy25 Transposase; ISBmu8 Transposase; Transposase Of; Transposase Fragment

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MILPVQEGISYFPTPLHLNHIGGSRFKKFLVKIDKTVPQDLDVHVICDNYATHKHPTINTWLVKHPRFHMHFTPTYSSWI
NQVERLFAEVTRELLQRSDHRSVQALEKDLRNWVKAWNEDPKPFIWTKTAEEILSSIARYLKRINGAGH

Sequences:

>Translated_149_residues
MILPVQEGISYFPTPLHLNHIGGSRFKKFLVKIDKTVPQDLDVHVICDNYATHKHPTINTWLVKHPRFHMHFTPTYSSWI
NQVERLFAEVTRELLQRSDHRSVQALEKDLRNWVKAWNEDPKPFIWTKTAEEILSSIARYLKRINGAGH
>Mature_149_residues
MILPVQEGISYFPTPLHLNHIGGSRFKKFLVKIDKTVPQDLDVHVICDNYATHKHPTINTWLVKHPRFHMHFTPTYSSWI
NQVERLFAEVTRELLQRSDHRSVQALEKDLRNWVKAWNEDPKPFIWTKTAEEILSSIARYLKRINGAGH

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17534; Mature: 17534

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPVQEGISYFPTPLHLNHIGGSRFKKFLVKIDKTVPQDLDVHVICDNYATHKHPTINT
CCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC
WLVKHPRFHMHFTPTYSSWINQVERLFAEVTRELLQRSDHRSVQALEKDLRNWVKAWNED
EEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PKPFIWTKTAEEILSSIARYLKRINGAGH
CCCEEECHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MILPVQEGISYFPTPLHLNHIGGSRFKKFLVKIDKTVPQDLDVHVICDNYATHKHPTINT
CCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC
WLVKHPRFHMHFTPTYSSWINQVERLFAEVTRELLQRSDHRSVQALEKDLRNWVKAWNED
EEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PKPFIWTKTAEEILSSIARYLKRINGAGH
CCCEEECHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA