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The map label for this gene is clpS [H]

Identifier: 62391355

GI number: 62391355

Start: 2634554

End: 2634928

Strand: Reverse

Name: clpS [H]

Synonym: cg2772

Alternate gene names: 62391355

Gene position: 2634928-2634554 (Counterclockwise)

Preceding gene: 62391360

Following gene: 62391354

Centisome position: 80.27

GC content: 52.27

Gene sequence:

>375_bases
ATGAATAGGCAAAACCAACTTCACTACCCGCAGGAAGTGAAGGCAGTGGAAAGTGTGGAATCAAGCTTGAACATGTCGTC
ACCTTCTGCACCGCTTGCCACGCCAGATGTTGAGCTTGATGTGCACACGTTGTCGAGCGAAAACCTGCCTTGGTTGTGCA
TCGTGTGGGATGATCCGGTCAATTTGATGAGCTATGTCACCTACGTTTTTCAGACTGTGTTGGGCTTCAGTAAGAAGAGG
GCCACTGAGCTGATGATGCAGGTGCACACCGAAGGTAAAGCCGTGGTGAGTTCTGGCGAGAAGGACAAAGTGGAGGGTGA
TGTGAAGAAACTCCACACCGCAGGGCTGTGGGCGACAATGCAGCAGGCAGGGTAG

Upstream 100 bases:

>100_bases
GGATAAAAATTTGGATGACATATCACCTAAGCTTGCAATTTCTACTGGAATAGCGCGACTACTCTGCACCAACGCATAGT
TGTTGACTAGGCTATTTGTC

Downstream 100 bases:

>100_bases
GGGAGAATTTTCATGCAGCAGTGGAAGAAGAAAAAAGGGCTGATGCGCCAGGCTCGTTACGCGGTGGTTTTTGAGCCGAT
GGAGCGGGAAGTGTTGGGTG

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNRQNQLHYPQEVKAVESVESSLNMSSPSAPLATPDVELDVHTLSSENLPWLCIVWDDPVNLMSYVTYVFQTVLGFSKKR
ATELMMQVHTEGKAVVSSGEKDKVEGDVKKLHTAGLWATMQQAG

Sequences:

>Translated_124_residues
MNRQNQLHYPQEVKAVESVESSLNMSSPSAPLATPDVELDVHTLSSENLPWLCIVWDDPVNLMSYVTYVFQTVLGFSKKR
ATELMMQVHTEGKAVVSSGEKDKVEGDVKKLHTAGLWATMQQAG
>Mature_124_residues
MNRQNQLHYPQEVKAVESVESSLNMSSPSAPLATPDVELDVHTLSSENLPWLCIVWDDPVNLMSYVTYVFQTVLGFSKKR
ATELMMQVHTEGKAVVSSGEKDKVEGDVKKLHTAGLWATMQQAG

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 13763; Mature: 13763

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQNQLHYPQEVKAVESVESSLNMSSPSAPLATPDVELDVHTLSSENLPWLCIVWDDPV
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCHH
NLMSYVTYVFQTVLGFSKKRATELMMQVHTEGKAVVSSGEKDKVEGDVKKLHTAGLWATM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH
QQAG
HHCC
>Mature Secondary Structure
MNRQNQLHYPQEVKAVESVESSLNMSSPSAPLATPDVELDVHTLSSENLPWLCIVWDDPV
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCHH
NLMSYVTYVFQTVLGFSKKRATELMMQVHTEGKAVVSSGEKDKVEGDVKKLHTAGLWATM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH
QQAG
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]