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The map label for this gene is tnp15a(ISCg15a)

Identifier: 62391344

GI number: 62391344

Start: 2625750

End: 2626334

Strand: Reverse

Name: tnp15a(ISCg15a)

Synonym: cg2757

Alternate gene names: NA

Gene position: 2626334-2625750 (Counterclockwise)

Preceding gene: 62391345

Following gene: 62391343

Centisome position: 80.01

GC content: 58.12

Gene sequence:

>585_bases
ATGATGACTGAACGTGGTGTGCCAGTCGATCACACCACCATCTACCGCTGGGTCCAGAAATACGCCCCTGAGCTGGATAA
GCAGACTCGCTGGTACCGGCAGGTTCCTGACTGGCAGGCCAGTTCCTGGCGGGTGGATGAGACCTATATCCGGGTCGGCG
GCACGTGGTGCTATCTCTACCGGGCTATTACCGCGGGTGGGCAGACCCTGGAGTTTTATCTCTCACCAAAACGGAATGTG
GCTGCGGCCAAGCGTTTCCTGGCCAAGACGCTGCGATCGAATACGACAGCCGGGTCCCCGCGGGTCATCAACACCGACAA
GGCACCAGCTCTGGCCAAGGCAATATCCGAGCTGAAGGCGGAGGGAATCTGCCCTCAGACGGTGGAGCACCGGCAGGTGA
AATACCTCAACAACGTTATCGAGGGAGATCATGGCCGACTTAAAAGAATCCTGGGGCCGAAGGGAGCGTTCAAAAACCGA
ATTTCCGCCTACCGGACGTTGAAAGGGATGGAAGCGATGCATTCATTACGGAAAGGCCAGGGCACGATGTTTGACCTCAC
GGGCACCCGAACCCAGACGCGGTGA

Upstream 100 bases:

>100_bases
GGGCATCTTCTCCGGTCGGCATTTCCCTCGCGAGATCCATCCTGTGGGCGGTGCGGTGGTACTGCCGCTACGGGGTGAGC
TGACCTAAGATCTCGAAGAG

Downstream 100 bases:

>100_bases
TCGTCAGCCGGATATTCGAGACAGCTTAAGCACCCCGGAGCAAGGACAACTAATGTCTTGAGGTTGGGCTTTTCGACCCT
GGCCCAACTTTGCAACAGCA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MMTERGVPVDHTTIYRWVQKYAPELDKQTRWYRQVPDWQASSWRVDETYIRVGGTWCYLYRAITAGGQTLEFYLSPKRNV
AAAKRFLAKTLRSNTTAGSPRVINTDKAPALAKAISELKAEGICPQTVEHRQVKYLNNVIEGDHGRLKRILGPKGAFKNR
ISAYRTLKGMEAMHSLRKGQGTMFDLTGTRTQTR

Sequences:

>Translated_194_residues
MMTERGVPVDHTTIYRWVQKYAPELDKQTRWYRQVPDWQASSWRVDETYIRVGGTWCYLYRAITAGGQTLEFYLSPKRNV
AAAKRFLAKTLRSNTTAGSPRVINTDKAPALAKAISELKAEGICPQTVEHRQVKYLNNVIEGDHGRLKRILGPKGAFKNR
ISAYRTLKGMEAMHSLRKGQGTMFDLTGTRTQTR
>Mature_194_residues
MMTERGVPVDHTTIYRWVQKYAPELDKQTRWYRQVPDWQASSWRVDETYIRVGGTWCYLYRAITAGGQTLEFYLSPKRNV
AAAKRFLAKTLRSNTTAGSPRVINTDKAPALAKAISELKAEGICPQTVEHRQVKYLNNVIEGDHGRLKRILGPKGAFKNR
ISAYRTLKGMEAMHSLRKGQGTMFDLTGTRTQTR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 22137; Mature: 22137

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTERGVPVDHTTIYRWVQKYAPELDKQTRWYRQVPDWQASSWRVDETYIRVGGTWCYLY
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECHHEEEECCHHHHHH
RAITAGGQTLEFYLSPKRNVAAAKRFLAKTLRSNTTAGSPRVINTDKAPALAKAISELKA
HHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHH
EGICPQTVEHRQVKYLNNVIEGDHGRLKRILGPKGAFKNRISAYRTLKGMEAMHSLRKGQ
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GTMFDLTGTRTQTR
CCEEEECCCCCCCC
>Mature Secondary Structure
MMTERGVPVDHTTIYRWVQKYAPELDKQTRWYRQVPDWQASSWRVDETYIRVGGTWCYLY
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECHHEEEECCHHHHHH
RAITAGGQTLEFYLSPKRNVAAAKRFLAKTLRSNTTAGSPRVINTDKAPALAKAISELKA
HHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHH
EGICPQTVEHRQVKYLNNVIEGDHGRLKRILGPKGAFKNRISAYRTLKGMEAMHSLRKGQ
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GTMFDLTGTRTQTR
CCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]