| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is glsK
Identifier: 62391320
GI number: 62391320
Start: 2598164
End: 2599405
Strand: Reverse
Name: glsK
Synonym: cg2728
Alternate gene names: 62391320
Gene position: 2599405-2598164 (Counterclockwise)
Preceding gene: 62391327
Following gene: 62391319
Centisome position: 79.18
GC content: 58.29
Gene sequence:
>1242_bases ATGTTGACGATGCCGATACCCGAGTACCTGCACGAAATTTTAGATGATGTCCGCGACACCACCTCCGGCGAGTTGGCCGA TTACATCCCGGAACTAAAATCTGCGGACCCAAACCCGCTGGCAGTAGCCCTGTGCACCGTTAACGGACACATCTACAGCG CAGGCGATGACGACATCGAATTCACCATGCAAAGTATTTCCAAGCCATTTGCCTACGCACTCGCACTCCAAGAATGCGGC TTTGATGAGGTCTCTGCATCCGTGGCCTTGGAGCCCTCCGGTGAGGCCTTCAACGAACTTTCCCTCGACGGCGAAAACCG CCCCATGAACCCCATGATCAACGCCGGCGCGATCGCCATCAACCAGCTGATCAACGGCTCCGATTCCACCGTGGAAGACC GCGTGGAAAAAATCCGACACTACTTCTCTGAACTTGCTGGACGCGAACTCACCATCGACCGCGTGCTTGCCGAATCCGAA CTCGCCGGCGCCGACCGCAACCTCTCCATCGCCCACATGCTGCGCAATTACGGCGTCATCGAAGACGAAGCCCACGACGC CGTCCTCAGCTACACGCTGCAATGCGCCATCAAAGTAACCACGCGCGACCTCGCAGTCATGACCGCCACGCTCGCCGCCG GCGGCACACACCCAATTACCGGCAAGAAGCTTCTCGACGCCCGCGTCTGCCGCCTCACCCTCTCCGTCATGGCTTCAGCA GGCATGTACGACGAGGCAGGGCAGTGGCTCTCCACCGTAGGCATCCCCGCGAAATCAGGAGTCGCCGGCGGACTCATCGG CATTCTGCCAGGTCAGCTGGGCATCGCCACATTTTCCCCACGCCTGAACCCCAAAGGCAACAGCGTGCGCGGCGTAAAAA TATTCAAACAGCTTTCCGACGACATGGGCCTCCACCTCATGTCCACCGAGCAGGTATCCGGCCACGCAGTACGATCCATC ACGCGGGACGGCGACACCACCTTCATCCAAATGCAGGGCGCCATGAACTTCTCCGCCAGCGAAAGCTTCCTCCACGCCAT CGTGGAACACAACTTTGAAGGCACCGAAGTTGTTCTTGATCTCACCCGAGTACTTAGCTTCCACCCCGTAGCCATCCGCA TGATCAAAGAAGGCCTCAAACGCATCCGCGACGCAGGCTTTGAGGTGTTCATCCTCGACCCAGATGACGTACTGCCCGAT TTCATGTTTTCCGACGGCACCATCTGCAAAGAACGAGTGTGA
Upstream 100 bases:
>100_bases TTTGCGACATCATAAATGGTGGCTTTTGAGTCGCTGTGAGCCCCAGAATCTGTCATGCACAAGAGTATATAGCGCAAAAG AAATCACTAGTCTTGATTCT
Downstream 100 bases:
>100_bases CCGGTAGCTTTATGGGCTGAACAATTCTAAGGAGAATTATCCGTGAAAAAGAAGCTTATGTTGCCTTTGATTGTTGCAGC TTTGGGGTTAAGTGCCTGCA
Product: glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MLTMPIPEYLHEILDDVRDTTSGELADYIPELKSADPNPLAVALCTVNGHIYSAGDDDIEFTMQSISKPFAYALALQECG FDEVSASVALEPSGEAFNELSLDGENRPMNPMINAGAIAINQLINGSDSTVEDRVEKIRHYFSELAGRELTIDRVLAESE LAGADRNLSIAHMLRNYGVIEDEAHDAVLSYTLQCAIKVTTRDLAVMTATLAAGGTHPITGKKLLDARVCRLTLSVMASA GMYDEAGQWLSTVGIPAKSGVAGGLIGILPGQLGIATFSPRLNPKGNSVRGVKIFKQLSDDMGLHLMSTEQVSGHAVRSI TRDGDTTFIQMQGAMNFSASESFLHAIVEHNFEGTEVVLDLTRVLSFHPVAIRMIKEGLKRIRDAGFEVFILDPDDVLPD FMFSDGTICKERV
Sequences:
>Translated_413_residues MLTMPIPEYLHEILDDVRDTTSGELADYIPELKSADPNPLAVALCTVNGHIYSAGDDDIEFTMQSISKPFAYALALQECG FDEVSASVALEPSGEAFNELSLDGENRPMNPMINAGAIAINQLINGSDSTVEDRVEKIRHYFSELAGRELTIDRVLAESE LAGADRNLSIAHMLRNYGVIEDEAHDAVLSYTLQCAIKVTTRDLAVMTATLAAGGTHPITGKKLLDARVCRLTLSVMASA GMYDEAGQWLSTVGIPAKSGVAGGLIGILPGQLGIATFSPRLNPKGNSVRGVKIFKQLSDDMGLHLMSTEQVSGHAVRSI TRDGDTTFIQMQGAMNFSASESFLHAIVEHNFEGTEVVLDLTRVLSFHPVAIRMIKEGLKRIRDAGFEVFILDPDDVLPD FMFSDGTICKERV >Mature_413_residues MLTMPIPEYLHEILDDVRDTTSGELADYIPELKSADPNPLAVALCTVNGHIYSAGDDDIEFTMQSISKPFAYALALQECG FDEVSASVALEPSGEAFNELSLDGENRPMNPMINAGAIAINQLINGSDSTVEDRVEKIRHYFSELAGRELTIDRVLAESE LAGADRNLSIAHMLRNYGVIEDEAHDAVLSYTLQCAIKVTTRDLAVMTATLAAGGTHPITGKKLLDARVCRLTLSVMASA GMYDEAGQWLSTVGIPAKSGVAGGLIGILPGQLGIATFSPRLNPKGNSVRGVKIFKQLSDDMGLHLMSTEQVSGHAVRSI TRDGDTTFIQMQGAMNFSASESFLHAIVEHNFEGTEVVLDLTRVLSFHPVAIRMIKEGLKRIRDAGFEVFILDPDDVLPD FMFSDGTICKERV
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain
Homologues:
Organism=Homo sapiens, GI156104878, Length=306, Percent_Identity=37.5816993464052, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI20336214, Length=300, Percent_Identity=38, Blast_Score=208, Evalue=8e-54, Organism=Escherichia coli, GI1786693, Length=288, Percent_Identity=39.9305555555556, Blast_Score=205, Evalue=4e-54, Organism=Escherichia coli, GI1787804, Length=297, Percent_Identity=34.3434343434343, Blast_Score=180, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17507019, Length=356, Percent_Identity=37.6404494382022, Blast_Score=234, Evalue=5e-62, Organism=Caenorhabditis elegans, GI17532727, Length=312, Percent_Identity=40.0641025641026, Blast_Score=231, Evalue=4e-61, Organism=Caenorhabditis elegans, GI193204073, Length=314, Percent_Identity=38.2165605095541, Blast_Score=217, Evalue=7e-57, Organism=Caenorhabditis elegans, GI193204075, Length=316, Percent_Identity=37.9746835443038, Blast_Score=216, Evalue=1e-56, Organism=Drosophila melanogaster, GI281363241, Length=356, Percent_Identity=33.9887640449438, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI24653164, Length=356, Percent_Identity=33.9887640449438, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI24653162, Length=356, Percent_Identity=33.9887640449438, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI281363239, Length=356, Percent_Identity=33.9887640449438, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI24653166, Length=356, Percent_Identity=33.9887640449438, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24653156, Length=356, Percent_Identity=33.9887640449438, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24653158, Length=356, Percent_Identity=33.9887640449438, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI116008307, Length=356, Percent_Identity=33.9887640449438, Blast_Score=210, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLSA_CORGL (Q8NMT3)
Other databases:
- EMBL: BA000036 - EMBL: BX927155 - RefSeq: NP_601682.1 - RefSeq: YP_226722.1 - ProteinModelPortal: Q8NMT3 - SMR: Q8NMT3 - GeneID: 1020428 - GeneID: 3342801 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg2728 - KEGG: cgl:NCgl2395 - HOGENOM: HBG512335 - OMA: LLENDHP - PhylomeDB: Q8NMT3 - ProtClustDB: PRK00971 - BioCyc: CGLU196627:CG2728-MONOMER - BRENDA: 3.5.1.2 - HAMAP: MF_00313 - InterPro: IPR012338 - InterPro: IPR015868 - InterPro: IPR002645 - Gene3D: G3DSA:3.40.710.20 - Gene3D: G3DSA:3.30.750.24 - PANTHER: PTHR12544 - TIGRFAMs: TIGR03814
Pfam domain/function: PF04960 Glutaminase; SSF56601 PBP_transp_fold; SSF52091 STAS
EC number: =3.5.1.2
Molecular weight: Translated: 44748; Mature: 44748
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTMPIPEYLHEILDDVRDTTSGELADYIPELKSADPNPLAVALCTVNGHIYSAGDDDIE CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCHHH FTMQSISKPFAYALALQECGFDEVSASVALEPSGEAFNELSLDGENRPMNPMINAGAIAI HHHHHHCCHHHHHHHHHHCCCCHHCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHH NQLINGSDSTVEDRVEKIRHYFSELAGRELTIDRVLAESELAGADRNLSIAHMLRNYGVI HHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCC EDEAHDAVLSYTLQCAIKVTTRDLAVMTATLAAGGTHPITGKKLLDARVCRLTLSVMASA CCCHHHHHHHEEEEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC GMYDEAGQWLSTVGIPAKSGVAGGLIGILPGQLGIATFSPRLNPKGNSVRGVKIFKQLSD CCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH DMGLHLMSTEQVSGHAVRSITRDGDTTFIQMQGAMNFSASESFLHAIVEHNFEGTEVVLD HCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHH LTRVLSFHPVAIRMIKEGLKRIRDAGFEVFILDPDDVLPDFMFSDGTICKERV HHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCHHHCCCCCCCCCCC >Mature Secondary Structure MLTMPIPEYLHEILDDVRDTTSGELADYIPELKSADPNPLAVALCTVNGHIYSAGDDDIE CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCHHH FTMQSISKPFAYALALQECGFDEVSASVALEPSGEAFNELSLDGENRPMNPMINAGAIAI HHHHHHCCHHHHHHHHHHCCCCHHCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHH NQLINGSDSTVEDRVEKIRHYFSELAGRELTIDRVLAESELAGADRNLSIAHMLRNYGVI HHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCC EDEAHDAVLSYTLQCAIKVTTRDLAVMTATLAAGGTHPITGKKLLDARVCRLTLSVMASA CCCHHHHHHHEEEEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC GMYDEAGQWLSTVGIPAKSGVAGGLIGILPGQLGIATFSPRLNPKGNSVRGVKIFKQLSD CCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH DMGLHLMSTEQVSGHAVRSITRDGDTTFIQMQGAMNFSASESFLHAIVEHNFEGTEVVLD HCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHH LTRVLSFHPVAIRMIKEGLKRIRDAGFEVFILDPDDVLPDFMFSDGTICKERV HHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626