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The map label for this gene is oppA [H]

Identifier: 62391220

GI number: 62391220

Start: 2490071

End: 2491648

Strand: Reverse

Name: oppA [H]

Synonym: cg2610

Alternate gene names: 62391220

Gene position: 2491648-2490071 (Counterclockwise)

Preceding gene: 62391222

Following gene: 62391219

Centisome position: 75.9

GC content: 53.23

Gene sequence:

>1578_bases
ATGCGCACAGCCACAAAAGTCATCGCAACAGTGATGGCCTCAACCCTGGCTATCGGGCTGGCATCTTGTTCCAGCTCTAG
TGGCACCCCAGACGTGAATTACGTATCCGTCAACGGCACCGAACCTCAGCGCGGACTCATCCCGGGCGACACCAATGAAA
ACGGCGGTGGGCGAGTGGTGGACATGCTGTACTCCGGGCTCGTCTACTTTGATGAAGCTGGCGTTGCTCAAAATGACCTG
GCGGCATCAATTGACCAGGAAACAGACACCACCTACAAAATCACTTTGCGTGATGGCATCAAATTCAGTGACGGATCGGA
TATTACTGCCACTGATTTTGTGGATACCTGGAATTTTGTAGTGGAAAATGGACTGCTCAACACTTCTTTCTTCTCACCGA
TTAAAGGGTATGAGGAGGGCGTGGAAACGCTCGAGGGTTTGAATGTGGTGGATGATCGCACATTTACCATCGAGCTTGCC
CAACCGGATTCTGAGTTCACCCAACGCATTGGCTACTACGGTTTTGCACCGATGCCAGCTTCGGCTCGCGATGATATTGA
CGCCTTTGGTGAAAACCCCGTGTCCTCTGGCCCTTACAAACTAGAGCAGTGGGATCACAACGCAGAACTGAAAGTGGTGG
CCAATGAACACTACGATGGCCCGCGCGCAGCCAACAACGATGGCTTGAAGTACGTGTTCTACGCCCAAAATGATGCAGCT
TATTCAGATCTGTTGGCTGGAAACCTAGATGTGCTGGATCTCATTCCACCATCGGCGTACACCACCTATGAAGAGGAACT
GTCGGGTCGATCCATTAATCAACCTGCGGCCTCCTATCTGGAACTCTCCATTCGCATGGAATCCCCCAACTTTGAAGGGC
AACAGGGACAGTTGCGTCGACAAGCAATTTCTATGGCGATTAACCGTGAAGAAATCGCTGAGCAGATCTTCGCCGGCACC
TACACGCCTGCGCTCGACTTCACCGCGCCCGTGCTCGACGGCTGGCGCGATGATTTGAACGGCAATGACGTGCTGACTTT
CCAGCCTGACAAGGCCCGTGAGCTGTGGGAAGACGCTGAGGAGATCGCACCTTTTGAGGGCGAATTGCAGATCAGTTACA
ACGCGGATGTTCCCAACCGGGAATGGGTGGATGCGGTAGCAAACAGCATCAGCAACGAATTAGACGTCAACGCCACTGGC
AATCCTTTCCCCGATTTTAAATCCTTCCGCGACACATACCGCACCACCGGATTGGATGGCGCCTACCGCACCGCGTGGTT
TGCGGACTACCCAAGCATCGGCAACTTCCTTGGACCTAACTACACCTCGGGCGTGGCCTCCAACGATGCCAAGTACGAAA
ACCCAGAATTTGATCAATTGATTGCCGACGCCGCAGCAGCCTCCACCAAGGAGGAAACCTTCCAGGCATATGCGCAGGCC
CAGGAAATGTTGTTGCGCGATCTTCCCGCAATCCCACTGTGGTACCCGAATGTGGTTGGCGGCTACTCAGAATCCGTGGA
CAACGTCTCCGTAAACTGGAAGGCCATACCTGTTTATTGGGCAATTACAAAGCAATAA

Upstream 100 bases:

>100_bases
AAGGTGTGGTGAGTCACTGGCTAGATTTGATTTGTTGGCCATACCAAATCGGCCCACACAGGCACGTTGCAAACAGCAAC
GCTCACCCATAGGAGATTTA

Downstream 100 bases:

>100_bases
ACTCATTAACCTAAATCCGGATACTTGATAAACAAGTACAGGGGTTAAGATGGTCTGCGTGACTGACCAGAATAATGAGA
CCACCAGCCAGAACCGCGCA

Product: ABC-type dipeptide/oligopeptide/nickel transport system, component

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MRTATKVIATVMASTLAIGLASCSSSSGTPDVNYVSVNGTEPQRGLIPGDTNENGGGRVVDMLYSGLVYFDEAGVAQNDL
AASIDQETDTTYKITLRDGIKFSDGSDITATDFVDTWNFVVENGLLNTSFFSPIKGYEEGVETLEGLNVVDDRTFTIELA
QPDSEFTQRIGYYGFAPMPASARDDIDAFGENPVSSGPYKLEQWDHNAELKVVANEHYDGPRAANNDGLKYVFYAQNDAA
YSDLLAGNLDVLDLIPPSAYTTYEEELSGRSINQPAASYLELSIRMESPNFEGQQGQLRRQAISMAINREEIAEQIFAGT
YTPALDFTAPVLDGWRDDLNGNDVLTFQPDKARELWEDAEEIAPFEGELQISYNADVPNREWVDAVANSISNELDVNATG
NPFPDFKSFRDTYRTTGLDGAYRTAWFADYPSIGNFLGPNYTSGVASNDAKYENPEFDQLIADAAAASTKEETFQAYAQA
QEMLLRDLPAIPLWYPNVVGGYSESVDNVSVNWKAIPVYWAITKQ

Sequences:

>Translated_525_residues
MRTATKVIATVMASTLAIGLASCSSSSGTPDVNYVSVNGTEPQRGLIPGDTNENGGGRVVDMLYSGLVYFDEAGVAQNDL
AASIDQETDTTYKITLRDGIKFSDGSDITATDFVDTWNFVVENGLLNTSFFSPIKGYEEGVETLEGLNVVDDRTFTIELA
QPDSEFTQRIGYYGFAPMPASARDDIDAFGENPVSSGPYKLEQWDHNAELKVVANEHYDGPRAANNDGLKYVFYAQNDAA
YSDLLAGNLDVLDLIPPSAYTTYEEELSGRSINQPAASYLELSIRMESPNFEGQQGQLRRQAISMAINREEIAEQIFAGT
YTPALDFTAPVLDGWRDDLNGNDVLTFQPDKARELWEDAEEIAPFEGELQISYNADVPNREWVDAVANSISNELDVNATG
NPFPDFKSFRDTYRTTGLDGAYRTAWFADYPSIGNFLGPNYTSGVASNDAKYENPEFDQLIADAAAASTKEETFQAYAQA
QEMLLRDLPAIPLWYPNVVGGYSESVDNVSVNWKAIPVYWAITKQ
>Mature_525_residues
MRTATKVIATVMASTLAIGLASCSSSSGTPDVNYVSVNGTEPQRGLIPGDTNENGGGRVVDMLYSGLVYFDEAGVAQNDL
AASIDQETDTTYKITLRDGIKFSDGSDITATDFVDTWNFVVENGLLNTSFFSPIKGYEEGVETLEGLNVVDDRTFTIELA
QPDSEFTQRIGYYGFAPMPASARDDIDAFGENPVSSGPYKLEQWDHNAELKVVANEHYDGPRAANNDGLKYVFYAQNDAA
YSDLLAGNLDVLDLIPPSAYTTYEEELSGRSINQPAASYLELSIRMESPNFEGQQGQLRRQAISMAINREEIAEQIFAGT
YTPALDFTAPVLDGWRDDLNGNDVLTFQPDKARELWEDAEEIAPFEGELQISYNADVPNREWVDAVANSISNELDVNATG
NPFPDFKSFRDTYRTTGLDGAYRTAWFADYPSIGNFLGPNYTSGVASNDAKYENPEFDQLIADAAAASTKEETFQAYAQA
QEMLLRDLPAIPLWYPNVVGGYSESVDNVSVNWKAIPVYWAITKQ

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=459, Percent_Identity=24.400871459695, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI1787495, Length=512, Percent_Identity=23.6328125, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1789397, Length=479, Percent_Identity=25.0521920668058, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787052, Length=501, Percent_Identity=24.3512974051896, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1787762, Length=518, Percent_Identity=23.5521235521236, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1789966, Length=528, Percent_Identity=22.3484848484848, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57703; Mature: 57703

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTATKVIATVMASTLAIGLASCSSSSGTPDVNYVSVNGTEPQRGLIPGDTNENGGGRVV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHH
DMLYSGLVYFDEAGVAQNDLAASIDQETDTTYKITLRDGIKFSDGSDITATDFVDTWNFV
HHHHCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEEECCCEECCCCCCEEHHHHHHHHHH
VENGLLNTSFFSPIKGYEEGVETLEGLNVVDDRTFTIELAQPDSEFTQRIGYYGFAPMPA
HHCCCCCCHHHCHHHHHHHHHHHHHCCCEECCCEEEEEECCCCHHHHHHCCCCCCCCCCC
SARDDIDAFGENPVSSGPYKLEQWDHNAELKVVANEHYDGPRAANNDGLKYVFYAQNDAA
CCCCCHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCH
YSDLLAGNLDVLDLIPPSAYTTYEEELSGRSINQPAASYLELSIRMESPNFEGQQGQLRR
HHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
QAISMAINREEIAEQIFAGTYTPALDFTAPVLDGWRDDLNGNDVLTFQPDKARELWEDAE
HHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
EIAPFEGELQISYNADVPNREWVDAVANSISNELDVNATGNPFPDFKSFRDTYRTTGLDG
HHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCCCC
AYRTAWFADYPSIGNFLGPNYTSGVASNDAKYENPEFDQLIADAAAASTKEETFQAYAQA
CHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
QEMLLRDLPAIPLWYPNVVGGYSESVDNVSVNWKAIPVYWAITKQ
HHHHHHHCCCCCEECCHHHCCCCCCCCCEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MRTATKVIATVMASTLAIGLASCSSSSGTPDVNYVSVNGTEPQRGLIPGDTNENGGGRVV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHH
DMLYSGLVYFDEAGVAQNDLAASIDQETDTTYKITLRDGIKFSDGSDITATDFVDTWNFV
HHHHCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEEECCCEECCCCCCEEHHHHHHHHHH
VENGLLNTSFFSPIKGYEEGVETLEGLNVVDDRTFTIELAQPDSEFTQRIGYYGFAPMPA
HHCCCCCCHHHCHHHHHHHHHHHHHCCCEECCCEEEEEECCCCHHHHHHCCCCCCCCCCC
SARDDIDAFGENPVSSGPYKLEQWDHNAELKVVANEHYDGPRAANNDGLKYVFYAQNDAA
CCCCCHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCH
YSDLLAGNLDVLDLIPPSAYTTYEEELSGRSINQPAASYLELSIRMESPNFEGQQGQLRR
HHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
QAISMAINREEIAEQIFAGTYTPALDFTAPVLDGWRDDLNGNDVLTFQPDKARELWEDAE
HHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
EIAPFEGELQISYNADVPNREWVDAVANSISNELDVNATGNPFPDFKSFRDTYRTTGLDG
HHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCCCC
AYRTAWFADYPSIGNFLGPNYTSGVASNDAKYENPEFDQLIADAAAASTKEETFQAYAQA
CHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
QEMLLRDLPAIPLWYPNVVGGYSESVDNVSVNWKAIPVYWAITKQ
HHHHHHHCCCCCEECCHHHCCCCCCCCCEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]