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The map label for this gene is 62391166

Identifier: 62391166

GI number: 62391166

Start: 2434275

End: 2434826

Strand: Reverse

Name: 62391166

Synonym: cg2553

Alternate gene names: NA

Gene position: 2434826-2434275 (Counterclockwise)

Preceding gene: 62391168

Following gene: 62391161

Centisome position: 74.17

GC content: 52.9

Gene sequence:

>552_bases
ATGAGACTGTTCGCGTCTATCACTCCGCCGATTGAAGTCACCGAGCATCTGATCAACGCGCTTCGTCCCTACAAGGATGA
TCTGCGGTGGTCTGATCCAGACAATTGGCACATCACGTTGGCGTTCTATGGAGAATTACCTGATGGGGCAGTCGAAGATC
TCATTGAGCATCTGACAAGTGCAGCCCGAATCAATGAAGAATTCACCATCAGAATCAAAGGCGCAGGCTCATTTAATCGG
AAGAATTTGTGGATGGGTGTTGGTGGTGACACCAAAGATCTGCGGCGACTGATGGCTGATTGTCTGATTGATCCTGAGGA
ACGCCGACGCCAGCGTGCACACCTGACCGTGGCGAAACCAACGCAGCGACAGCGCAGCCGCGATTGGGATCCTGTCATCC
CCGATCTGGTCCACGCTCTCTCTATATACGAAGGCCCCGAATGGCCAGTCGATGAGATTGAACTGGTGTCTTCTGAACCT
GGAAAAGGCAGAAGCGGTGGGCCACTGTATACAACCGTGGCCACCATTGCGTTGTCATCTGCGCTGGTTTAA

Upstream 100 bases:

>100_bases
GATTATTCATGGAACATCCTTAGCGGAGTTATGCAAACGTTTTCATAAGGGGTTATTCCATTCTACGTCGATCTTTGTAG
AAGGTGGTTATTATGGCTTC

Downstream 100 bases:

>100_bases
AGGCTCAACCGCGGAACGGCATCAAGCAGCTCCTTGGTGTATTCGGTCTGTGGGTGATCATAAACCGAATCGATGGGCCC
TTGCTCAAGGACTCGTCCCT

Product: 2'-5' RNA ligase

Products: NA

Alternate protein names: 2 5' RNA Ligase; tRNA Ligase; 2 5' RNA Ligase Family Protein

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MRLFASITPPIEVTEHLINALRPYKDDLRWSDPDNWHITLAFYGELPDGAVEDLIEHLTSAARINEEFTIRIKGAGSFNR
KNLWMGVGGDTKDLRRLMADCLIDPEERRRQRAHLTVAKPTQRQRSRDWDPVIPDLVHALSIYEGPEWPVDEIELVSSEP
GKGRSGGPLYTTVATIALSSALV

Sequences:

>Translated_183_residues
MRLFASITPPIEVTEHLINALRPYKDDLRWSDPDNWHITLAFYGELPDGAVEDLIEHLTSAARINEEFTIRIKGAGSFNR
KNLWMGVGGDTKDLRRLMADCLIDPEERRRQRAHLTVAKPTQRQRSRDWDPVIPDLVHALSIYEGPEWPVDEIELVSSEP
GKGRSGGPLYTTVATIALSSALV
>Mature_183_residues
MRLFASITPPIEVTEHLINALRPYKDDLRWSDPDNWHITLAFYGELPDGAVEDLIEHLTSAARINEEFTIRIKGAGSFNR
KNLWMGVGGDTKDLRRLMADCLIDPEERRRQRAHLTVAKPTQRQRSRDWDPVIPDLVHALSIYEGPEWPVDEIELVSSEP
GKGRSGGPLYTTVATIALSSALV

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20640; Mature: 20640

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFASITPPIEVTEHLINALRPYKDDLRWSDPDNWHITLAFYGELPDGAVEDLIEHLTS
CCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
AARINEEFTIRIKGAGSFNRKNLWMGVGGDTKDLRRLMADCLIDPEERRRQRAHLTVAKP
HHHCCCEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCEEEECC
TQRQRSRDWDPVIPDLVHALSIYEGPEWPVDEIELVSSEPGKGRSGGPLYTTVATIALSS
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHH
ALV
HCC
>Mature Secondary Structure
MRLFASITPPIEVTEHLINALRPYKDDLRWSDPDNWHITLAFYGELPDGAVEDLIEHLTS
CCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
AARINEEFTIRIKGAGSFNRKNLWMGVGGDTKDLRRLMADCLIDPEERRRQRAHLTVAKP
HHHCCCEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCEEEECC
TQRQRSRDWDPVIPDLVHALSIYEGPEWPVDEIELVSSEPGKGRSGGPLYTTVATIALSS
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHH
ALV
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA