| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
Click here to switch to the map view.
The map label for this gene is 62391159
Identifier: 62391159
GI number: 62391159
Start: 2427392
End: 2428741
Strand: Reverse
Name: 62391159
Synonym: cg2546
Alternate gene names: NA
Gene position: 2428741-2427392 (Counterclockwise)
Preceding gene: 62391160
Following gene: 62391158
Centisome position: 73.99
GC content: 49.41
Gene sequence:
>1350_bases ATGGGAATCATTGCTCTGCTCGTTTTTATCGCAATTGCCGTGATATTGAATGTGTTTTTGAAACGAGATATTTCAGAAGC ATTGCTAGTTGGATTAGTAGGAACTGCGCTTGTCGGCGGTGTAAATGCACCGACATTACTGATTGATGCTGTAGTGGATG CTGCTCAGTCGGAAGTTACTTTCGCAGGTATGGCCTTTGTTTTCATGGGCATCGTTGTGCAATCAACTGGATTGATTGAT CGATTAATCGCAATCCTTAACTCGATTTTTGGTCGGCTTCGAGGTGGCGCAGGTTATGTTTCCACTCTTGGATCTGCGCT CATTGGACTCATCGCTGGATCAACGGCTGGAAACTCCGCGACGGTTGGCTCAGTGACGATCCCTTGGATGAAAAAGACGG GATGGACTGCTGAAAGGTCCGCAACGTTAGTCGCGGGCAACTCTGGCCTTGGTGTTGCGTTGCCTCCCAATTCAACAATG TTCATCATTTTGGCATTGCCAGCTGCAGCAGCTTCTTCGGCCTCTCAGGTGTACATTGCTTTGGCTTGTGGTGGTGCGTA TGCAGTGCTCTACCGCTTAGCGGTCGTCTTTTACTGGACACGTAAAGATAAAATTCCTGCCACCCCTGATGATCAACGGG TGTCATTCGGTGAGGCAATGAAGACTGGATGGCGTTCACCGTTGATCTTCCTTGGAATTTTGATCCCCGTAATCCTCACA ATCGGCCCATTGTCTGAATGGTTAAAGACACATGGAGTTGGGGAGTCTGGTGTTAAATCGATGTCGATCATCGTGTGGGT GCCAATTCTGATTACGGCAATTGCTCTGATTGAAGGGCGTAAACGAATTGCTAACAACATGGCACACTTTAGGGTTCAGA TCTCCAAGGACTTGCCACAATTTGCCACCGTAGGAATTTCGTTGTTTTCTGCGCTTGCAGCAGCGAACATCATGGAAGAA CTGGGTGTTGGCCCGCAGTTGTCTAACTGGCTTGATTCCATGGACCTACCTAAGTCTGTCATGGTGATCATTGTCTGCAT CATGTGCATTGTGGTGGCAACGCCACTGTCGTCAACAGCAACCGCGGCTGCGATTGGTGCTCCCGCTGTCGCTGCGTTGG CTGCGGTAGGTATTGATCCAACTGTGGCGATCGTAGTGATCTTGCTGTGCACTTCCACTGAAGGTGCATCCCCGCCGGTG GGCGCGCCGATTTACCTTTCTGCTGCGATCGCCGATGCAAACCCAACGAAAATGTTCGTACCACTGATTACGTACTTTGT TGTCCCCATGATTCTGCTTGCTTGGCTAGTTGGAATGGGATTCTTACCAGTGATTGTTCCTACGGGTTAA
Upstream 100 bases:
>100_bases CACTTTTTGGGTGAAAATTCCACGAAGTTAATGCCGCTTTAAGTCAATTCAATCACATGTAACATGCTACGGTTTTTTCG GTCACTTAAAGGAGGCGCTT
Downstream 100 bases:
>100_bases AGGGGTAAAAATGAACTCAATTTTCAAACTATTTAGTGTTCTGTTTGCCGTATTTCTAGTGGCTTTCCTCATTGGTGGCA CCCTTATTGTCGGTGTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: C4-Dicarboxylate Transport System Permease Large Protein; TRAP Transporter; TRAP Dicarboxylate Transporter; TRAP Transporter 4TM/12TM Fusion Protein; TRAP-T Family C4-Dicarboxylate Transporter; TRAP Dicarboxylate Transporter DctM Subunit; TRAP Dicarboxylate Transporter Subunit DctM
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MGIIALLVFIAIAVILNVFLKRDISEALLVGLVGTALVGGVNAPTLLIDAVVDAAQSEVTFAGMAFVFMGIVVQSTGLID RLIAILNSIFGRLRGGAGYVSTLGSALIGLIAGSTAGNSATVGSVTIPWMKKTGWTAERSATLVAGNSGLGVALPPNSTM FIILALPAAAASSASQVYIALACGGAYAVLYRLAVVFYWTRKDKIPATPDDQRVSFGEAMKTGWRSPLIFLGILIPVILT IGPLSEWLKTHGVGESGVKSMSIIVWVPILITAIALIEGRKRIANNMAHFRVQISKDLPQFATVGISLFSALAAANIMEE LGVGPQLSNWLDSMDLPKSVMVIIVCIMCIVVATPLSSTATAAAIGAPAVAALAAVGIDPTVAIVVILLCTSTEGASPPV GAPIYLSAAIADANPTKMFVPLITYFVVPMILLAWLVGMGFLPVIVPTG
Sequences:
>Translated_449_residues MGIIALLVFIAIAVILNVFLKRDISEALLVGLVGTALVGGVNAPTLLIDAVVDAAQSEVTFAGMAFVFMGIVVQSTGLID RLIAILNSIFGRLRGGAGYVSTLGSALIGLIAGSTAGNSATVGSVTIPWMKKTGWTAERSATLVAGNSGLGVALPPNSTM FIILALPAAAASSASQVYIALACGGAYAVLYRLAVVFYWTRKDKIPATPDDQRVSFGEAMKTGWRSPLIFLGILIPVILT IGPLSEWLKTHGVGESGVKSMSIIVWVPILITAIALIEGRKRIANNMAHFRVQISKDLPQFATVGISLFSALAAANIMEE LGVGPQLSNWLDSMDLPKSVMVIIVCIMCIVVATPLSSTATAAAIGAPAVAALAAVGIDPTVAIVVILLCTSTEGASPPV GAPIYLSAAIADANPTKMFVPLITYFVVPMILLAWLVGMGFLPVIVPTG >Mature_448_residues GIIALLVFIAIAVILNVFLKRDISEALLVGLVGTALVGGVNAPTLLIDAVVDAAQSEVTFAGMAFVFMGIVVQSTGLIDR LIAILNSIFGRLRGGAGYVSTLGSALIGLIAGSTAGNSATVGSVTIPWMKKTGWTAERSATLVAGNSGLGVALPPNSTMF IILALPAAAASSASQVYIALACGGAYAVLYRLAVVFYWTRKDKIPATPDDQRVSFGEAMKTGWRSPLIFLGILIPVILTI GPLSEWLKTHGVGESGVKSMSIIVWVPILITAIALIEGRKRIANNMAHFRVQISKDLPQFATVGISLFSALAAANIMEEL GVGPQLSNWLDSMDLPKSVMVIIVCIMCIVVATPLSSTATAAAIGAPAVAALAAVGIDPTVAIVVILLCTSTEGASPPVG APIYLSAAIADANPTKMFVPLITYFVVPMILLAWLVGMGFLPVIVPTG
Specific function: Unknown
COG id: COG1593
COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46423; Mature: 46292
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIIALLVFIAIAVILNVFLKRDISEALLVGLVGTALVGGVNAPTLLIDAVVDAAQSEVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FAGMAFVFMGIVVQSTGLIDRLIAILNSIFGRLRGGAGYVSTLGSALIGLIAGSTAGNSA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC TVGSVTIPWMKKTGWTAERSATLVAGNSGLGVALPPNSTMFIILALPAAAASSASQVYIA EECCEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEECCHHCCCCCEEEEE LACGGAYAVLYRLAVVFYWTRKDKIPATPDDQRVSFGEAMKTGWRSPLIFLGILIPVILT EECCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH IGPLSEWLKTHGVGESGVKSMSIIVWVPILITAIALIEGRKRIANNMAHFRVQISKDLPQ HCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHCCHH FATVGISLFSALAAANIMEELGVGPQLSNWLDSMDLPKSVMVIIVCIMCIVVATPLSSTA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH TAAAIGAPAVAALAAVGIDPTVAIVVILLCTSTEGASPPVGAPIYLSAAIADANPTKMFV HHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHH PLITYFVVPMILLAWLVGMGFLPVIVPTG HHHHHHHHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure GIIALLVFIAIAVILNVFLKRDISEALLVGLVGTALVGGVNAPTLLIDAVVDAAQSEVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FAGMAFVFMGIVVQSTGLIDRLIAILNSIFGRLRGGAGYVSTLGSALIGLIAGSTAGNSA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC TVGSVTIPWMKKTGWTAERSATLVAGNSGLGVALPPNSTMFIILALPAAAASSASQVYIA EECCEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEECCHHCCCCCEEEEE LACGGAYAVLYRLAVVFYWTRKDKIPATPDDQRVSFGEAMKTGWRSPLIFLGILIPVILT EECCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH IGPLSEWLKTHGVGESGVKSMSIIVWVPILITAIALIEGRKRIANNMAHFRVQISKDLPQ HCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHCCHH FATVGISLFSALAAANIMEELGVGPQLSNWLDSMDLPKSVMVIIVCIMCIVVATPLSSTA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH TAAAIGAPAVAALAAVGIDPTVAIVVILLCTSTEGASPPVGAPIYLSAAIADANPTKMFV HHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHH PLITYFVVPMILLAWLVGMGFLPVIVPTG HHHHHHHHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA