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The map label for this gene is ydiU [C]

Identifier: 62390839

GI number: 62390839

Start: 2081288

End: 2082712

Strand: Direct

Name: ydiU [C]

Synonym: cg2190

Alternate gene names: 62390839

Gene position: 2081288-2082712 (Clockwise)

Preceding gene: 62390835

Following gene: 62390842

Centisome position: 63.4

GC content: 54.18

Gene sequence:

>1425_bases
ATGAATACTGCACCTTTCAAACTCGAAGCTGACTTCGCATCAGCCCTGCCCACCATGGCAGCCCCCTGGCAAGGTGAGGA
AGCCCCCAACCCTGAGCTCGTGATTTTAAATGACGACCTCGCCTACAGCCTCGGGCTTGATCCGACATGGCTTCGCACAC
CTGAGGGCGTTCAATTTCTTCTCGGACTCAACCCCGAGCCCTTAACAAAAGCAGTTGCGCAGGCCTATTCCGGCCACCAA
TTCGGACAGTTTGTGGCAAGCCTTGGTGATGGCCGAGCGCTTCTTCTCGGCGAAGCCCGCTCAGCTGACGGCGTACTGCA
TGATATCCACCTCAAAGGATCTGGACGAACCCAATTCTCCCGAGGAGCCGATGGACGCGCCGTCCTTGGCCCCGTCTTAC
GCGAATACATCATCTCCGAAGCGATGCATGCACTTGGTGTTCCCACCACCAGGTCACTTGCAGTAATTAGCACCGGTAGG
AAAATCCAACGAGGAAGCGTAGCCCCAGGCGCAGTCCTTGTTCGAGTAGCAACCAGCCTCATTCGAGTCGGATCCTTCCA
ATACTCCAACATCTCTGGTGGCATCGAACTATCTCAACACCTGGCGAACTATACGATCACCAGGCATTTCCCTTCGTTGG
TAGCTGAACTATCCGCACCAACCCCCGCAACTTATGTATCACTGTTTAAAGCGATTCTTCAGCGCCAAGCAGACACCGTT
GGAAAATGGACCAGGCTGGGTTTCGTTCACGGAGCCCTCAACACAGACAACACGTTGATATCCGGAGAAACTGTTGACTA
CGGCCCATGCGCTTTCATGGAGCGCTACCGTGGCGACGCGAAATTTAGCTCCATCGACACTTATGGTCGCTACAAATTTG
AAAACCAACCTATGATCCTCGGATGGAACATGGCCCGCCTCGTAGAAACCCTCCTCCCACTCCTGGGCGCCACACCAGAC
GAAGGCATGACAGCAGCCCAAGAAGCTCTCGTAGAATTCGATGACCTCTGCGAACAAGCAATCCGAAAAGAATTCGCCAC
TGCACTGGGCCTTGACGAGTCAGACACCGGCACGGTAGAGCAGTTCCGTGAACTGCTCTACCTCCATAACCCCGACATCA
CCACGCTGCTGCGCGCACTCACCGACAACACCGCACCACCGAGTGGCTTTGAAGCATTCGTTCACGACTGGAAAACCCAA
GACCCAGATATCGAAGCAATGCGAGCAGTAAATCCACTTTTCATTCCACGCAATCACCTCGTGGAAGCTGCTCTCGCAGA
CGCAGTTGAAGGGAATCTAGAAAAGTTCCACGAACTCCTCGCTGCTGTCACCAATCCTTTTGATCCAACTGCGGGCCCCG
ATGAACTACGCCTGCCAAGCGAAGAAGGATTTGAAGAAGACTACATGACCTTCTGCGGTACCTAG

Upstream 100 bases:

>100_bases
AGGAGACTGGCTGGATTATTGGCTGGTTTTCTTGGGAAATCGTCATGGGCATTAATCCTAGTCCCAACAATTGCCAGAAC
CCGAACACTAGGCTTGAACC

Downstream 100 bases:

>100_bases
GACAGATGGTGGGGCAGACGTCGGGGTCGCTGCGTGGAGCGCTTAGAACTGCTAGAACTCCGCGATATTGATCTTCTTCA
TCGCAAGAAGCTTTTCATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MNTAPFKLEADFASALPTMAAPWQGEEAPNPELVILNDDLAYSLGLDPTWLRTPEGVQFLLGLNPEPLTKAVAQAYSGHQ
FGQFVASLGDGRALLLGEARSADGVLHDIHLKGSGRTQFSRGADGRAVLGPVLREYIISEAMHALGVPTTRSLAVISTGR
KIQRGSVAPGAVLVRVATSLIRVGSFQYSNISGGIELSQHLANYTITRHFPSLVAELSAPTPATYVSLFKAILQRQADTV
GKWTRLGFVHGALNTDNTLISGETVDYGPCAFMERYRGDAKFSSIDTYGRYKFENQPMILGWNMARLVETLLPLLGATPD
EGMTAAQEALVEFDDLCEQAIRKEFATALGLDESDTGTVEQFRELLYLHNPDITTLLRALTDNTAPPSGFEAFVHDWKTQ
DPDIEAMRAVNPLFIPRNHLVEAALADAVEGNLEKFHELLAAVTNPFDPTAGPDELRLPSEEGFEEDYMTFCGT

Sequences:

>Translated_474_residues
MNTAPFKLEADFASALPTMAAPWQGEEAPNPELVILNDDLAYSLGLDPTWLRTPEGVQFLLGLNPEPLTKAVAQAYSGHQ
FGQFVASLGDGRALLLGEARSADGVLHDIHLKGSGRTQFSRGADGRAVLGPVLREYIISEAMHALGVPTTRSLAVISTGR
KIQRGSVAPGAVLVRVATSLIRVGSFQYSNISGGIELSQHLANYTITRHFPSLVAELSAPTPATYVSLFKAILQRQADTV
GKWTRLGFVHGALNTDNTLISGETVDYGPCAFMERYRGDAKFSSIDTYGRYKFENQPMILGWNMARLVETLLPLLGATPD
EGMTAAQEALVEFDDLCEQAIRKEFATALGLDESDTGTVEQFRELLYLHNPDITTLLRALTDNTAPPSGFEAFVHDWKTQ
DPDIEAMRAVNPLFIPRNHLVEAALADAVEGNLEKFHELLAAVTNPFDPTAGPDELRLPSEEGFEEDYMTFCGT
>Mature_474_residues
MNTAPFKLEADFASALPTMAAPWQGEEAPNPELVILNDDLAYSLGLDPTWLRTPEGVQFLLGLNPEPLTKAVAQAYSGHQ
FGQFVASLGDGRALLLGEARSADGVLHDIHLKGSGRTQFSRGADGRAVLGPVLREYIISEAMHALGVPTTRSLAVISTGR
KIQRGSVAPGAVLVRVATSLIRVGSFQYSNISGGIELSQHLANYTITRHFPSLVAELSAPTPATYVSLFKAILQRQADTV
GKWTRLGFVHGALNTDNTLISGETVDYGPCAFMERYRGDAKFSSIDTYGRYKFENQPMILGWNMARLVETLLPLLGATPD
EGMTAAQEALVEFDDLCEQAIRKEFATALGLDESDTGTVEQFRELLYLHNPDITTLLRALTDNTAPPSGFEAFVHDWKTQ
DPDIEAMRAVNPLFIPRNHLVEAALADAVEGNLEKFHELLAAVTNPFDPTAGPDELRLPSEEGFEEDYMTFCGT

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=374, Percent_Identity=34.4919786096257, Blast_Score=202, Evalue=7e-52,
Organism=Escherichia coli, GI1787999, Length=445, Percent_Identity=34.1573033707865, Blast_Score=236, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6325034, Length=281, Percent_Identity=35.9430604982206, Blast_Score=172, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 51596; Mature: 51596

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAPFKLEADFASALPTMAAPWQGEEAPNPELVILNDDLAYSLGLDPTWLRTPEGVQFL
CCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCEEE
LGLNPEPLTKAVAQAYSGHQFGQFVASLGDGRALLLGEARSADGVLHDIHLKGSGRTQFS
ECCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCC
RGADGRAVLGPVLREYIISEAMHALGVPTTRSLAVISTGRKIQRGSVAPGAVLVRVATSL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCCHHHHHHHHHHH
IRVGSFQYSNISGGIELSQHLANYTITRHFPSLVAELSAPTPATYVSLFKAILQRQADTV
HHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
GKWTRLGFVHGALNTDNTLISGETVDYGPCAFMERYRGDAKFSSIDTYGRYKFENQPMIL
HHHHHHHHEEECCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCEEE
GWNMARLVETLLPLLGATPDEGMTAAQEALVEFDDLCEQAIRKEFATALGLDESDTGTVE
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
QFRELLYLHNPDITTLLRALTDNTAPPSGFEAFVHDWKTQDPDIEAMRAVNPLFIPRNHL
HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCEECCHHHH
VEAALADAVEGNLEKFHELLAAVTNPFDPTAGPDELRLPSEEGFEEDYMTFCGT
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MNTAPFKLEADFASALPTMAAPWQGEEAPNPELVILNDDLAYSLGLDPTWLRTPEGVQFL
CCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCEEE
LGLNPEPLTKAVAQAYSGHQFGQFVASLGDGRALLLGEARSADGVLHDIHLKGSGRTQFS
ECCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCC
RGADGRAVLGPVLREYIISEAMHALGVPTTRSLAVISTGRKIQRGSVAPGAVLVRVATSL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCCHHHHHHHHHHH
IRVGSFQYSNISGGIELSQHLANYTITRHFPSLVAELSAPTPATYVSLFKAILQRQADTV
HHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
GKWTRLGFVHGALNTDNTLISGETVDYGPCAFMERYRGDAKFSSIDTYGRYKFENQPMIL
HHHHHHHHEEECCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCEEE
GWNMARLVETLLPLLGATPDEGMTAAQEALVEFDDLCEQAIRKEFATALGLDESDTGTVE
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
QFRELLYLHNPDITTLLRALTDNTAPPSGFEAFVHDWKTQDPDIEAMRAVNPLFIPRNHL
HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCEECCHHHH
VEAALADAVEGNLEKFHELLAAVTNPFDPTAGPDELRLPSEEGFEEDYMTFCGT
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA