| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is gluB
Identifier: 62390791
GI number: 62390791
Start: 2030669
End: 2031556
Strand: Direct
Name: gluB
Synonym: cg2137
Alternate gene names: 62390791
Gene position: 2030669-2031556 (Clockwise)
Preceding gene: 62390790
Following gene: 62390792
Centisome position: 61.86
GC content: 55.86
Gene sequence:
>888_bases ATGTCTGCAAAGCGTACTTTTACCCGTATCGGTGCGATTCTTGGAGCAACTGCACTTGCCGGAGTTACCCTCACCGCCTG TGGTGATTCAAGCGGTGGCGACGGATTCCTCGCAGCCATTGAAAATGGTTCTGTCAATGTCGGCACCAAATACGATCAGC CTGGTCTTGGCCTCCGCAACCCAGACAACTCCATGAGCGGTCTCGACGTGGATGTTGCTGAATACGTAGTCAACTCCATC GCTGATGACAAGGGCTGGGATCACCCCACCATCGAATGGCGTGAATCCCCTTCTGCGCAGCGTGAAACCCTCATTCAAAA CGGTGAGGTAGACATGATCGCAGCAACCTACTCCATCAACGCTGGCCGTTCAGAGTCCGTCAACTTCGGTGGCCCATACC TGCTTACCCACCAGGCTCTGCTTGTTCGCCAAGATGACGATCGCATTGAAACCCTCGAGGACTTGGATAACGGTTTGATC CTGTGCTCCGTTTCCGGATCCACTCCAGCTCAGAAGGTCAAGGATGTCCTCCCAGGCGTTCAGCTCCAAGAATACGACAC CTACTCTTCCTGTGTTGAGGCACTGTCCCAGGGCAACGTTGACGCCCTGACCACTGACGCCACCATCCTCTTCGGCTACT CCCAGCAGTACGAAGGCGACTTCCGCGTTGTGGAAATGGAAAAGGACGGCGAGCCATTCACCGACGAGTACTACGGCATT GGCCTGAAGAAGGATGACCAGGAAGGCACCGACGCTATCAACGCCGCACTTGAGCGCATGTACGCTGACGGCACCTTCCA GCGACTGCTCACCGAGAACCTCGGTGAAGACTCCGTGGTTGTTGAAGAAGGCACCCCAGGTGACCTCTCCTTCCTCGACG CAAGCTAG
Upstream 100 bases:
>100_bases ATCTTCAGAGTCACTTCTTTCAGTGTCATTTTTCTCGGCCCTAATCCCCCGCTGGAGTTCAATCAGCGATTGCAACCTTT TAGATATATAAGGAGACAAC
Downstream 100 bases:
>100_bases TGTGACGGCTTTTAAAAGCCAGCTTTAAGAAATGTGCGTGGCGCTTAAAACCCCGAAAGCGCCACGCACAACCCATTTAA GTTCATGATTTATTTCCATC
Product: glutamate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSAKRTFTRIGAILGATALAGVTLTACGDSSGGDGFLAAIENGSVNVGTKYDQPGLGLRNPDNSMSGLDVDVAEYVVNSI ADDKGWDHPTIEWRESPSAQRETLIQNGEVDMIAATYSINAGRSESVNFGGPYLLTHQALLVRQDDDRIETLEDLDNGLI LCSVSGSTPAQKVKDVLPGVQLQEYDTYSSCVEALSQGNVDALTTDATILFGYSQQYEGDFRVVEMEKDGEPFTDEYYGI GLKKDDQEGTDAINAALERMYADGTFQRLLTENLGEDSVVVEEGTPGDLSFLDAS
Sequences:
>Translated_295_residues MSAKRTFTRIGAILGATALAGVTLTACGDSSGGDGFLAAIENGSVNVGTKYDQPGLGLRNPDNSMSGLDVDVAEYVVNSI ADDKGWDHPTIEWRESPSAQRETLIQNGEVDMIAATYSINAGRSESVNFGGPYLLTHQALLVRQDDDRIETLEDLDNGLI LCSVSGSTPAQKVKDVLPGVQLQEYDTYSSCVEALSQGNVDALTTDATILFGYSQQYEGDFRVVEMEKDGEPFTDEYYGI GLKKDDQEGTDAINAALERMYADGTFQRLLTENLGEDSVVVEEGTPGDLSFLDAS >Mature_294_residues SAKRTFTRIGAILGATALAGVTLTACGDSSGGDGFLAAIENGSVNVGTKYDQPGLGLRNPDNSMSGLDVDVAEYVVNSIA DDKGWDHPTIEWRESPSAQRETLIQNGEVDMIAATYSINAGRSESVNFGGPYLLTHQALLVRQDDDRIETLEDLDNGLIL CSVSGSTPAQKVKDVLPGVQLQEYDTYSSCVEALSQGNVDALTTDATILFGYSQQYEGDFRVVEMEKDGEPFTDEYYGIG LKKDDQEGTDAINAALERMYADGTFQRLLTENLGEDSVVVEEGTPGDLSFLDAS
Specific function: Part of the binding-protein-dependent transport system for glutamate
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family
Homologues:
Organism=Escherichia coli, GI1788228, Length=275, Percent_Identity=23.6363636363636, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GLUB_CORGL (P48242)
Other databases:
- EMBL: X81191 - EMBL: BA000036 - EMBL: BX927153 - RefSeq: NP_601158.1 - RefSeq: YP_226193.1 - ProteinModelPortal: P48242 - SMR: P48242 - GeneID: 1019908 - GeneID: 3344186 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg2137 - KEGG: cgl:NCgl1876 - HOGENOM: HBG698334 - OMA: RSESVNF - ProtClustDB: CLSK633555 - BioCyc: CGLU196627:CG2137-MONOMER - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 - SMART: SM00062 - TIGRFAMs: TIGR01096
Pfam domain/function: PF00497 SBP_bac_3
EC number: NA
Molecular weight: Translated: 31668; Mature: 31537
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS01039 SBP_BACTERIAL_3; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKRTFTRIGAILGATALAGVTLTACGDSSGGDGFLAAIENGSVNVGTKYDQPGLGLRN CCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCC PDNSMSGLDVDVAEYVVNSIADDKGWDHPTIEWRESPSAQRETLIQNGEVDMIAATYSIN CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEEEEEEEC AGRSESVNFGGPYLLTHQALLVRQDDDRIETLEDLDNGLILCSVSGSTPAQKVKDVLPGV CCCCCCCCCCCCEEEECEEEEEECCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCC QLQEYDTYSSCVEALSQGNVDALTTDATILFGYSQQYEGDFRVVEMEKDGEPFTDEYYGI EEECCCCHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCCCHHEEC GLKKDDQEGTDAINAALERMYADGTFQRLLTENLGEDSVVVEEGTPGDLSFLDAS CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCCCEEECCC >Mature Secondary Structure SAKRTFTRIGAILGATALAGVTLTACGDSSGGDGFLAAIENGSVNVGTKYDQPGLGLRN CCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCC PDNSMSGLDVDVAEYVVNSIADDKGWDHPTIEWRESPSAQRETLIQNGEVDMIAATYSIN CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEEEEEEEC AGRSESVNFGGPYLLTHQALLVRQDDDRIETLEDLDNGLILCSVSGSTPAQKVKDVLPGV CCCCCCCCCCCCEEEECEEEEEECCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCC QLQEYDTYSSCVEALSQGNVDALTTDATILFGYSQQYEGDFRVVEMEKDGEPFTDEYYGI EEECCCCHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCCCHHEEC GLKKDDQEGTDAINAALERMYADGTFQRLLTENLGEDSVVVEEGTPGDLSFLDAS CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7868586; 12948626