| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is ptsF [H]
Identifier: 62390776
GI number: 62390776
Start: 2013557
End: 2015623
Strand: Direct
Name: ptsF [H]
Synonym: cg2120
Alternate gene names: 62390776
Gene position: 2013557-2015623 (Clockwise)
Preceding gene: 62390775
Following gene: 62390777
Centisome position: 61.34
GC content: 59.26
Gene sequence:
>2067_bases ATGAATAGCGTAAATAATTCCTCGCTTGTCCGGCTGGATGTCGATTTCGGCGACTCCACCACGGATGTCATCAACAACCT TGCCACTGTTATTTTCGACGCTGGCCGAGCTTCCTCCGCCGACGCCCTTGCCAAAGACGCGCTGGATCGTGAAGCAAAGT CCGGCACCGGCGTTCCTGGTCAAGTTGCTATCCCCCACTGCCGTTCCGAAGCCGTATCTGTCCCTACCTTGGGCTTTGCT CGCCTGAGCAAGGGTGTGGACTTCAGCGGACCTGATGGCGATGCCAACTTGGTGTTCCTCATTGCAGCACCTGCTGGCGG CGGCAAAGAGCACCTGAAGATCCTGTCCAAGCTTGCTCGCTCCTTGGTGAAGAAGGATTTCATCAAGGCTCTGCAGGAAG CCACCACCGAGCAGGAAATCGTCGACGTTGTCGATGCCGTGCTCAACCCAGCACCAAAAACCACCGAGCCAGCTGCAGCT CCGGCTGCGGCGGCGGTTGCTGAGAGTGGGGCGGCGTCGACAAGCGTTACTCGTATCGTGGCAATCACCGCATGCCCAAC CGGTATCGCACACACCTACATGGCTGCGGATTCCCTGACGCAAAACGCGGAAGGCCGCGATGATGTGGAACTCGTTGTGG AGACTCAGGGCTCTTCCGCTGTCACCCCAGTCGATCCGAAGATCATCGAAGCTGCCGACGCCGTCATCTTCGCCACCGAC GTGGGAGTTAAAGACCGCGAGCGTTTCGCTGGCAAGCCAGTCATTGAATCCGGCGTCAAGCGCGCGATCAATGAGCCAGC CAAGATGATCGACGAGGCCATCGCAGCCTCCAAGAACCCAAACGCCCGCAAGGTTTCCGGTTCCGGTGTCGCGGCATCTG CTGAAACCACCGGCGAGAAGCTCGGCTGGGGCAAGCGCATCCAGCAGGCAGTCATGACCGGCGTGTCCTACATGGTTCCA TTCGTAGCTGCCGGCGGCCTCCTGTTGGCTCTCGGCTTCGCATTCGGTGGATACGACATGGCGAACGGCTGGCAAGCAAT CGCCACCCAGTTCTCTCTGACCAACCTGCCAGGCAACACCGTCGATGTTGACGGCGTGGCCATGACCTTCGAGCGTTCAG GCTTCCTGTTGTACTTCGGCGCAGTCCTGTTCGCCACCGGCCAAGCAGCCATGGGCTTCATCGTGGCAGCCCTGTCTGGC TACACCGCATACGCACTTGCTGGACGCCCAGGCATCGCGCCGGGCTTCGTCGGTGGCGCCATCTCCGTCACCATCGGCGC TGGCTTCATTGGTGGTCTGGTTACCGGTATCTTGGCTGGTCTCATTGCCCTGTGGATTGGCTCCTGGAAGGTGCCACGCG TGGTGCAGTCACTGATGCCTGTGGTCATCATCCCGCTACTTACCTCAGTGGTTGTTGGTCTCGTCATGTACCTCCTGCTG GGTCGCCCACTCGCATCCATCATGACTGGTTTGCAGGACTGGCTATCGTCAATGTCCGGAAGCTCCGCCATCTTGCTGGG TATCATCTTGGGCCTCATGATGTGTTTCGACCTCGGCGGACCAGTAAACAAGGCAGCCTACCTCTTTGGTACCGCAGGCC TGTCTACCGGCGACCAAGCTTCCATGGAAATCATGGCCGCGATCATGGCAGCTGGCATGGTCCCACCAATCGCGTTGTCC ATTGCTACCCTGCTGCGCAAGAAGCTGTTCACCCCAGCAGAGCAAGAAAACGGCAAGTCTTCCTGGCTGCTTGGCCTGGC ATTCGTCTCCGAAGGTGCCATCCCATTCGCCGCAGCTGACCCATTCCGTGTGATCCCAGCAATGATGGCTGGCGGTGCAA CCACTGGTGCAATCTCCATGGCACTGGGCGTCGGCTCTCGGGCTCCACACGGCGGTATCTTCGTGGTCTGGGCAATCGAA CCATGGTGGGGCTGGCTCATCGCACTTGCAGCAGGCACCATCGTGTCCACCATCGTTGTCATCGCACTGAAGCAGTTCTG GCCAAACAAGGCCGTCGCTGCAGAAGTCGCGAAGCAAGAAGCACAACAAGCAGCTGTAAACGCATAA
Upstream 100 bases:
>100_bases CGACTGCGGCGTCTCTTCCTGGCACTACCATTCCTCGTCCTGACCAACTCGCCACAGCTGGTGCAACGGTCACCCAAGTC AAAGGATTGAAAGAATCAGC
Downstream 100 bases:
>100_bases TCGGACCTTGACCCGATGTCTGGTCGGACATTGTTTTTGCTTCCGGTAACGTGGCAAAACGAACAATGTCTCACTAGACT AAAGTGAGATCGACATTAAA
Product: sugar specific PTS system, fructose/mannitol-specific transport protein
Products: NA
Alternate protein names: EIIABC-Fru; Fructose-specific phosphotransferase enzyme IIA component; EII-Fru; PTS system fructose-specific EIIA component; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MNSVNNSSLVRLDVDFGDSTTDVINNLATVIFDAGRASSADALAKDALDREAKSGTGVPGQVAIPHCRSEAVSVPTLGFA RLSKGVDFSGPDGDANLVFLIAAPAGGGKEHLKILSKLARSLVKKDFIKALQEATTEQEIVDVVDAVLNPAPKTTEPAAA PAAAAVAESGAASTSVTRIVAITACPTGIAHTYMAADSLTQNAEGRDDVELVVETQGSSAVTPVDPKIIEAADAVIFATD VGVKDRERFAGKPVIESGVKRAINEPAKMIDEAIAASKNPNARKVSGSGVAASAETTGEKLGWGKRIQQAVMTGVSYMVP FVAAGGLLLALGFAFGGYDMANGWQAIATQFSLTNLPGNTVDVDGVAMTFERSGFLLYFGAVLFATGQAAMGFIVAALSG YTAYALAGRPGIAPGFVGGAISVTIGAGFIGGLVTGILAGLIALWIGSWKVPRVVQSLMPVVIIPLLTSVVVGLVMYLLL GRPLASIMTGLQDWLSSMSGSSAILLGIILGLMMCFDLGGPVNKAAYLFGTAGLSTGDQASMEIMAAIMAAGMVPPIALS IATLLRKKLFTPAEQENGKSSWLLGLAFVSEGAIPFAAADPFRVIPAMMAGGATTGAISMALGVGSRAPHGGIFVVWAIE PWWGWLIALAAGTIVSTIVVIALKQFWPNKAVAAEVAKQEAQQAAVNA
Sequences:
>Translated_688_residues MNSVNNSSLVRLDVDFGDSTTDVINNLATVIFDAGRASSADALAKDALDREAKSGTGVPGQVAIPHCRSEAVSVPTLGFA RLSKGVDFSGPDGDANLVFLIAAPAGGGKEHLKILSKLARSLVKKDFIKALQEATTEQEIVDVVDAVLNPAPKTTEPAAA PAAAAVAESGAASTSVTRIVAITACPTGIAHTYMAADSLTQNAEGRDDVELVVETQGSSAVTPVDPKIIEAADAVIFATD VGVKDRERFAGKPVIESGVKRAINEPAKMIDEAIAASKNPNARKVSGSGVAASAETTGEKLGWGKRIQQAVMTGVSYMVP FVAAGGLLLALGFAFGGYDMANGWQAIATQFSLTNLPGNTVDVDGVAMTFERSGFLLYFGAVLFATGQAAMGFIVAALSG YTAYALAGRPGIAPGFVGGAISVTIGAGFIGGLVTGILAGLIALWIGSWKVPRVVQSLMPVVIIPLLTSVVVGLVMYLLL GRPLASIMTGLQDWLSSMSGSSAILLGIILGLMMCFDLGGPVNKAAYLFGTAGLSTGDQASMEIMAAIMAAGMVPPIALS IATLLRKKLFTPAEQENGKSSWLLGLAFVSEGAIPFAAADPFRVIPAMMAGGATTGAISMALGVGSRAPHGGIFVVWAIE PWWGWLIALAAGTIVSTIVVIALKQFWPNKAVAAEVAKQEAQQAAVNA >Mature_688_residues MNSVNNSSLVRLDVDFGDSTTDVINNLATVIFDAGRASSADALAKDALDREAKSGTGVPGQVAIPHCRSEAVSVPTLGFA RLSKGVDFSGPDGDANLVFLIAAPAGGGKEHLKILSKLARSLVKKDFIKALQEATTEQEIVDVVDAVLNPAPKTTEPAAA PAAAAVAESGAASTSVTRIVAITACPTGIAHTYMAADSLTQNAEGRDDVELVVETQGSSAVTPVDPKIIEAADAVIFATD VGVKDRERFAGKPVIESGVKRAINEPAKMIDEAIAASKNPNARKVSGSGVAASAETTGEKLGWGKRIQQAVMTGVSYMVP FVAAGGLLLALGFAFGGYDMANGWQAIATQFSLTNLPGNTVDVDGVAMTFERSGFLLYFGAVLFATGQAAMGFIVAALSG YTAYALAGRPGIAPGFVGGAISVTIGAGFIGGLVTGILAGLIALWIGSWKVPRVVQSLMPVVIIPLLTSVVVGLVMYLLL GRPLASIMTGLQDWLSSMSGSSAILLGIILGLMMCFDLGGPVNKAAYLFGTAGLSTGDQASMEIMAAIMAAGMVPPIALS IATLLRKKLFTPAEQENGKSSWLLGLAFVSEGAIPFAAADPFRVIPAMMAGGATTGAISMALGVGSRAPHGGIFVVWAIE PWWGWLIALAAGTIVSTIVVIALKQFWPNKAVAAEVAKQEAQQAAVNA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=493, Percent_Identity=44.421906693712, Blast_Score=365, Evalue=1e-102, Organism=Escherichia coli, GI1786951, Length=689, Percent_Identity=30.7692307692308, Blast_Score=290, Evalue=2e-79, Organism=Escherichia coli, GI87082348, Length=518, Percent_Identity=31.4671814671815, Blast_Score=207, Evalue=2e-54, Organism=Escherichia coli, GI1790386, Length=344, Percent_Identity=35.4651162790698, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI1788729, Length=419, Percent_Identity=26.2529832935561, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1790387, Length=95, Percent_Identity=46.3157894736842, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI2367327, Length=133, Percent_Identity=30.8270676691729, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1788726, Length=114, Percent_Identity=34.2105263157895, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR004715 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 70502; Mature: 70502
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVNNSSLVRLDVDFGDSTTDVINNLATVIFDAGRASSADALAKDALDREAKSGTGVPG CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC QVAIPHCRSEAVSVPTLGFARLSKGVDFSGPDGDANLVFLIAAPAGGGKEHLKILSKLAR CEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH SLVKKDFIKALQEATTEQEIVDVVDAVLNPAPKTTEPAAAPAAAAVAESGAASTSVTRIV HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHEEEE AITACPTGIAHTYMAADSLTQNAEGRDDVELVVETQGSSAVTPVDPKIIEAADAVIFATD EEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCEEEEEEC VGVKDRERFAGKPVIESGVKRAINEPAKMIDEAIAASKNPNARKVSGSGVAASAETTGEK CCCCHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHCHHH LGWGKRIQQAVMTGVSYMVPFVAAGGLLLALGFAFGGYDMANGWQAIATQFSLTNLPGNT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCCC VDVDGVAMTFERSGFLLYFGAVLFATGQAAMGFIVAALSGYTAYALAGRPGIAPGFVGGA EECCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCE ISVTIGAGFIGGLVTGILAGLIALWIGSWKVPRVVQSLMPVVIIPLLTSVVVGLVMYLLL EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRPLASIMTGLQDWLSSMSGSSAILLGIILGLMMCFDLGGPVNKAAYLFGTAGLSTGDQA CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCHH SMEIMAAIMAAGMVPPIALSIATLLRKKLFTPAEQENGKSSWLLGLAFVSEGAIPFAAAD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEEHHHHHHCCCCCCCCCC PFRVIPAMMAGGATTGAISMALGVGSRAPHGGIFVVWAIEPWWGWLIALAAGTIVSTIVV HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHH IALKQFWPNKAVAAEVAKQEAQQAAVNA HHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSVNNSSLVRLDVDFGDSTTDVINNLATVIFDAGRASSADALAKDALDREAKSGTGVPG CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC QVAIPHCRSEAVSVPTLGFARLSKGVDFSGPDGDANLVFLIAAPAGGGKEHLKILSKLAR CEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH SLVKKDFIKALQEATTEQEIVDVVDAVLNPAPKTTEPAAAPAAAAVAESGAASTSVTRIV HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHEEEE AITACPTGIAHTYMAADSLTQNAEGRDDVELVVETQGSSAVTPVDPKIIEAADAVIFATD EEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCEEEEEEC VGVKDRERFAGKPVIESGVKRAINEPAKMIDEAIAASKNPNARKVSGSGVAASAETTGEK CCCCHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHCHHH LGWGKRIQQAVMTGVSYMVPFVAAGGLLLALGFAFGGYDMANGWQAIATQFSLTNLPGNT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCCC VDVDGVAMTFERSGFLLYFGAVLFATGQAAMGFIVAALSGYTAYALAGRPGIAPGFVGGA EECCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCE ISVTIGAGFIGGLVTGILAGLIALWIGSWKVPRVVQSLMPVVIIPLLTSVVVGLVMYLLL EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRPLASIMTGLQDWLSSMSGSSAILLGIILGLMMCFDLGGPVNKAAYLFGTAGLSTGDQA CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCHH SMEIMAAIMAAGMVPPIALSIATLLRKKLFTPAEQENGKSSWLLGLAFVSEGAIPFAAAD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEEHHHHHHCCCCCCCCCC PFRVIPAMMAGGATTGAISMALGVGSRAPHGGIFVVWAIEPWWGWLIALAAGTIVSTIVV HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHH IALKQFWPNKAVAAEVAKQEAQQAAVNA HHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]