| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is dut [H]
Identifier: 62390744
GI number: 62390744
Start: 1977783
End: 1978232
Strand: Reverse
Name: dut [H]
Synonym: cg2086
Alternate gene names: 62390744
Gene position: 1978232-1977783 (Counterclockwise)
Preceding gene: 62390746
Following gene: 62390743
Centisome position: 60.26
GC content: 53.11
Gene sequence:
>450_bases GTGACTGATTTAGCAGCTATTAAAATTGTCCGACTCGATAAAGAACTTCCACTGCCTAAGCGCGCTCACCGTGGCGATGC TGGCGTTGATCTTCATGCCACCACAGATGCTGTGATTGCTCCGGGACATCGCGAAATCGTCGGCACTGGCATTGCAATTG CTTTGCCCTTGGGAACCGTCGGATTGGTTCACCCCCGTTCGGGTCTTGCTGCACGCGAAGGCCTCAGCATTGTCAACGCG CCGGGAACCATTGATGCTGATTACCGCGGAGAGATCAAGGTCTGCCTGATCAATCTTGATCCAGAAAAGCCCATCATGAT TACTCGTGGCGACCGCATCGCGCAGCTTGTGATCCAAAAGGTGGAACTTGTGGATTTCGAAGAAGTCGAAGAATTAGACG ACACCGTGCGCGGTGACCAGGGATACGGTTCCACCGGAAAAACAGCCTAA
Upstream 100 bases:
>100_bases GAAGATGCAGAATCAGATTGTCGGGAATCAGTCACAATAGGCAATCCTATCCCACGGGTCATTTAAGGTCATTTCCCGCA GGGTAGGTACGCTAAAAACT
Downstream 100 bases:
>100_bases ATCCACCCTAACTGCTTAAATCGGGTGGCAGGAATACACAATCCTCCTACACTGGAACGGATTAGAAACGCGAAAGCAAA GGACGGAAAAGAATCTCATG
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTDLAAIKIVRLDKELPLPKRAHRGDAGVDLHATTDAVIAPGHREIVGTGIAIALPLGTVGLVHPRSGLAAREGLSIVNA PGTIDADYRGEIKVCLINLDPEKPIMITRGDRIAQLVIQKVELVDFEEVEELDDTVRGDQGYGSTGKTA
Sequences:
>Translated_149_residues MTDLAAIKIVRLDKELPLPKRAHRGDAGVDLHATTDAVIAPGHREIVGTGIAIALPLGTVGLVHPRSGLAAREGLSIVNA PGTIDADYRGEIKVCLINLDPEKPIMITRGDRIAQLVIQKVELVDFEEVEELDDTVRGDQGYGSTGKTA >Mature_148_residues TDLAAIKIVRLDKELPLPKRAHRGDAGVDLHATTDAVIAPGHREIVGTGIAIALPLGTVGLVHPRSGLAAREGLSIVNAP GTIDADYRGEIKVCLINLDPEKPIMITRGDRIAQLVIQKVELVDFEEVEELDDTVRGDQGYGSTGKTA
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=142, Percent_Identity=43.6619718309859, Blast_Score=114, Evalue=2e-26, Organism=Homo sapiens, GI4503423, Length=142, Percent_Identity=43.6619718309859, Blast_Score=114, Evalue=3e-26, Organism=Homo sapiens, GI70906441, Length=142, Percent_Identity=43.6619718309859, Blast_Score=114, Evalue=4e-26, Organism=Escherichia coli, GI1790071, Length=140, Percent_Identity=39.2857142857143, Blast_Score=91, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71988561, Length=141, Percent_Identity=41.1347517730496, Blast_Score=108, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6319729, Length=142, Percent_Identity=36.6197183098592, Blast_Score=91, Evalue=9e-20, Organism=Drosophila melanogaster, GI24583610, Length=144, Percent_Identity=34.7222222222222, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI19921126, Length=144, Percent_Identity=34.7222222222222, Blast_Score=88, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15863; Mature: 15732
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLAAIKIVRLDKELPLPKRAHRGDAGVDLHATTDAVIAPGHREIVGTGIAIALPLGTV CCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEEECCEEEEECCCCE GLVHPRSGLAAREGLSIVNAPGTIDADYRGEIKVCLINLDPEKPIMITRGDRIAQLVIQK EEECCCCCCCHHCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHH VELVDFEEVEELDDTVRGDQGYGSTGKTA HHHCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TDLAAIKIVRLDKELPLPKRAHRGDAGVDLHATTDAVIAPGHREIVGTGIAIALPLGTV CCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEEECCEEEEECCCCE GLVHPRSGLAAREGLSIVNAPGTIDADYRGEIKVCLINLDPEKPIMITRGDRIAQLVIQK EEECCCCCCCHHCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHH VELVDFEEVEELDDTVRGDQGYGSTGKTA HHHCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA