| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62390663
Identifier: 62390663
GI number: 62390663
Start: 1889700
End: 1890917
Strand: Reverse
Name: 62390663
Synonym: cg2004
Alternate gene names: NA
Gene position: 1890917-1889700 (Counterclockwise)
Preceding gene: 62390664
Following gene: 62390662
Centisome position: 57.6
GC content: 46.63
Gene sequence:
>1218_bases ATGACAATACGAGCACCGCAACAACATCGGCGACGAAAGTTTAATGATTTATCCGGTAAAACTTTCGGGCATATAAAAGT TCTTTATCGCACTAACGATCGTGTAAACAAAAGTGGCAAGATTGAGGTTCGGTATCAATGTCTTTGTGATTGTGGCAGGG AGTATGATGCACCGGCCTCTAGATTTAAGAACGCTGATGAAACCGCATCGTGCGGTTGTCGTCGTTATGAGACTGTTCGT AAAAGGATGCAGGGTAAGAACTTACAGGATCTCATAGGTCAGGTGTTTGGGCGATGGACTGTCATAGATCGAGCGGAAAG TAGGGTTTCCTCCACAGGAAGGAAAACCACCATGTGGCATTGCAGATGTACTTGCGGTGTTGAGAAAGATCTTGCTGCGG GGTCACTGAAGAATGGTGATTCGAAATCGTGTGGTTGTCTAAAAATCGAGTCGCTTTCAAAGAATAGGGATTTAGTTGGT TCCACATTTGGTCGATGGTCTGTTGTTCGACGTGGTGAGGACGTGCTGCAGTGGGGTCGCTTATCTAAGGCGTGGTTTTG CGAGTGCGAGTGTGGAGCGACAAGGGACGTATTGGAACAGTCTTTGTTGCGGGGTCGGTCAATATCGTGCGGGTGCTATC GCATAGAACAGCGACGAGAAACTGCTGTTTTTGAAGATTTGACTGGCAAGGTATTTAACCAGTGGACTGTGCTGTCTCGT ACGGATGACAGGTTTTACCCTGGTGGTGGGCGGTCTCAAATGTGGTTGTGCCGATGTATGTGCGGCTCCGAAAATGCTGT TGCTGGGATTATGTTGAGGCAGGGTATTAGCCAATCGTGTGGTTGTTTGCACGGATCAATCCAAGAGTCACATGTCAGGG ACTTTCTTTTAAAGAATGATTTTCAGTTTGAATCTCAAAAGACTTTCGATGGTTTGGTGGGGGTTGGTGGAGGACCACTG AGTTATGATTTTTTGGTTTTCAAGGATACCGAGCCCTGGTTGTTGATTGAGTGCCAAGGTGAGCAGCATTTTAGACCAGT TGAGTATTTCGGTGGAGAGAGTCGTTTCGCGATCCAACAAGAGCACGACAGACGAAAACGAGCGTTTACTGTAGTCCGAG AGCTAACACTTTTGGAGATCCCATATACGGCGAGAACAGCAGAATCAATTGGCGAGTTATTAGTAAGTGGTCCGTTTCAG GAAGAAGTTTTTGGATAG
Upstream 100 bases:
>100_bases TAGTGAAATGGACCACTTGTTATCAAGGCTGAAAGCTTGTTTAATTAATTAAAAGGGGTAATATATACAAATAAAGGTAT ATATTTGAAAGTAGTTTGAG
Downstream 100 bases:
>100_bases CGGTTTTGCGTAGACTGACGAAGAATAATAAGCAGTCGAACGAGTGTTGAAAAGTAGTGATCGAAGCGTTGATAGCTCTT GTAATGAGAGCAGGAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTIRAPQQHRRRKFNDLSGKTFGHIKVLYRTNDRVNKSGKIEVRYQCLCDCGREYDAPASRFKNADETASCGCRRYETVR KRMQGKNLQDLIGQVFGRWTVIDRAESRVSSTGRKTTMWHCRCTCGVEKDLAAGSLKNGDSKSCGCLKIESLSKNRDLVG STFGRWSVVRRGEDVLQWGRLSKAWFCECECGATRDVLEQSLLRGRSISCGCYRIEQRRETAVFEDLTGKVFNQWTVLSR TDDRFYPGGGRSQMWLCRCMCGSENAVAGIMLRQGISQSCGCLHGSIQESHVRDFLLKNDFQFESQKTFDGLVGVGGGPL SYDFLVFKDTEPWLLIECQGEQHFRPVEYFGGESRFAIQQEHDRRKRAFTVVRELTLLEIPYTARTAESIGELLVSGPFQ EEVFG
Sequences:
>Translated_405_residues MTIRAPQQHRRRKFNDLSGKTFGHIKVLYRTNDRVNKSGKIEVRYQCLCDCGREYDAPASRFKNADETASCGCRRYETVR KRMQGKNLQDLIGQVFGRWTVIDRAESRVSSTGRKTTMWHCRCTCGVEKDLAAGSLKNGDSKSCGCLKIESLSKNRDLVG STFGRWSVVRRGEDVLQWGRLSKAWFCECECGATRDVLEQSLLRGRSISCGCYRIEQRRETAVFEDLTGKVFNQWTVLSR TDDRFYPGGGRSQMWLCRCMCGSENAVAGIMLRQGISQSCGCLHGSIQESHVRDFLLKNDFQFESQKTFDGLVGVGGGPL SYDFLVFKDTEPWLLIECQGEQHFRPVEYFGGESRFAIQQEHDRRKRAFTVVRELTLLEIPYTARTAESIGELLVSGPFQ EEVFG >Mature_404_residues TIRAPQQHRRRKFNDLSGKTFGHIKVLYRTNDRVNKSGKIEVRYQCLCDCGREYDAPASRFKNADETASCGCRRYETVRK RMQGKNLQDLIGQVFGRWTVIDRAESRVSSTGRKTTMWHCRCTCGVEKDLAAGSLKNGDSKSCGCLKIESLSKNRDLVGS TFGRWSVVRRGEDVLQWGRLSKAWFCECECGATRDVLEQSLLRGRSISCGCYRIEQRRETAVFEDLTGKVFNQWTVLSRT DDRFYPGGGRSQMWLCRCMCGSENAVAGIMLRQGISQSCGCLHGSIQESHVRDFLLKNDFQFESQKTFDGLVGVGGGPLS YDFLVFKDTEPWLLIECQGEQHFRPVEYFGGESRFAIQQEHDRRKRAFTVVRELTLLEIPYTARTAESIGELLVSGPFQE EVFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46097; Mature: 45966
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRAPQQHRRRKFNDLSGKTFGHIKVLYRTNDRVNKSGKIEVRYQCLCDCGREYDAPAS CCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHCCCCCCCCHH RFKNADETASCGCRRYETVRKRMQGKNLQDLIGQVFGRWTVIDRAESRVSSTGRKTTMWH HCCCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEHHHHHHHHHCCCEEEEEE CRCTCGVEKDLAAGSLKNGDSKSCGCLKIESLSKNRDLVGSTFGRWSVVRRGEDVLQWGR EEEECCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCHHHHHHCCHHHHHHCC LSKAWFCECECGATRDVLEQSLLRGRSISCGCYRIEQRRETAVFEDLTGKVFNQWTVLSR CCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEC TDDRFYPGGGRSQMWLCRCMCGSENAVAGIMLRQGISQSCGCLHGSIQESHVRDFLLKND CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCC FQFESQKTFDGLVGVGGGPLSYDFLVFKDTEPWLLIECQGEQHFRPVEYFGGESRFAIQQ CCCCCCCCCCCEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHCCCCCEEEECH EHDRRKRAFTVVRELTLLEIPYTARTAESIGELLVSGPFQEEVFG HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure TIRAPQQHRRRKFNDLSGKTFGHIKVLYRTNDRVNKSGKIEVRYQCLCDCGREYDAPAS CCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHCCCCCCCCHH RFKNADETASCGCRRYETVRKRMQGKNLQDLIGQVFGRWTVIDRAESRVSSTGRKTTMWH HCCCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEHHHHHHHHHCCCEEEEEE CRCTCGVEKDLAAGSLKNGDSKSCGCLKIESLSKNRDLVGSTFGRWSVVRRGEDVLQWGR EEEECCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCHHHHHHCCHHHHHHCC LSKAWFCECECGATRDVLEQSLLRGRSISCGCYRIEQRRETAVFEDLTGKVFNQWTVLSR CCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEC TDDRFYPGGGRSQMWLCRCMCGSENAVAGIMLRQGISQSCGCLHGSIQESHVRDFLLKND CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCC FQFESQKTFDGLVGVGGGPLSYDFLVFKDTEPWLLIECQGEQHFRPVEYFGGESRFAIQQ CCCCCCCCCCCEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHCCCCCEEEECH EHDRRKRAFTVVRELTLLEIPYTARTAESIGELLVSGPFQEEVFG HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA