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The map label for this gene is 62390624

Identifier: 62390624

GI number: 62390624

Start: 1844990

End: 1846831

Strand: Direct

Name: 62390624

Synonym: cg1963

Alternate gene names: NA

Gene position: 1844990-1846831 (Clockwise)

Preceding gene: 62390623

Following gene: 62390625

Centisome position: 56.2

GC content: 52.28

Gene sequence:

>1842_bases
ATGACCTCAACAACCCAACCTGGCACAACACCTGAGCTCAGCGCAGACACTCATTCTGAGCCCTGGGATGTCGTCATCGA
AAACACCCTTGAACCTTTTCAAAAAGTCGTTCGTCAATTTATTATTGACCGCCCCTATTCCGGCATTTTCCTCACCATGG
GTGGCGGCAAAACACTCACTACCCTCTCCGCATTGACCTATATCCAGCCACCTGGACACATTCTGGTTGTCGCGCCTCTA
AATATCTCTCGACTCACCTGGCCCGAAGAGGTTCGCAAGTGGAATATCCCTGTTAACGCAATCTCGCTGATCACCAATGA
GCGCGGCACCAAACTCACCCGCGCCAAACGCCTCAAACTCTATGAGGAAACAGCGACCACACCACCAACGCTGTATTACA
TCACCATTAATCTGCTCGAAGATATTGTCAATTACTTTGGTGATAGGTGGCCGTTTTGGACAGTCATTATTGATGAGTCA
CAGACAATCTCTGATATATCCTCCAAGCGCACTAGAGCGCTCTTTTCTGTGCGACCCTATATCGGCAGACTAATTCTGCT
CACCGGAACCCCCAGCGCCAACAAGTTCGACTCCATTTACGCCCAAGTCGCAGTGCTAGATTATGGTGCCAGCCTGGGTG
ACAACATCGACGTATTCCGAGCCAGATGGTGTGCGCCCGACATTATTACCGATAAACAAGTGCGTCGCTGGAAGCCGGCT
AACAAGCAGGCTGAAGCAGAGGTGTACCGCACTATTAGCCACCTGGTCATGTCTGCCGTCAACACGGATATTAAGCTGCC
ACCGCTGCATTTTGTTGATCACGAGGTACACATGAGCGACGATGAGCACCGCGACTACGAGCTCTTCAAAAAGGACGCGG
TGCTTGCTGCATTGCTCGATATGGCTGAAGAGAATGAGGGTGGCGAAGGCGCTGATGACACTGACGCTGCTGATTCAGCG
ACAACGACCCCACCTGCGTCATCACAGCCAACAAACCCTGCCATCCCCGCTGGACTGCTTCAGGCAATACAACAAACCCA
GGACACCAATGGTCGCGCCATCGCGCCTGTGACCACAGCTGAACTTGATCATTTTGATGATCTGCCAGTACAGCGCCAAG
AAGATCTTGGCACCTTAGTTGTTATCTCTGCTGTTCACGCAGCGACTCTGCGCATGAAACTGCTGCAATACGCAGGTGGT
GCTGTCTATGTCGATCCAGAAGATTCTGCGCAGTCCCAAGACCTGGATGCCAGCACTGCACGTGATGTTATCGACGCTAC
CAACACCGCCATGACCACTATTACCTCTCGCCCCACCATGATTGTGCACCTGCACAAGGTGCGAAAAGTCATTGAGATTT
TATGCAACCCTGCACTCGGCGGTGAACCTGTCAATATCGACCAGGACGAGACCGGAAAACAGGTGTACACACCCACCCCA
ACGCTTGTCGCCTATCGCTTTATCTCTGACAAAGAAATCCTGCTTCATTACCTGGCGCAGGCGGGTGTGCAGGGTGTGGA
GGTTTTTGACGGGTCGCCTGACATGCTGAGCCGTTGGAATGCGGGACGCATTCCGGTCTTACTTTTGCAGCCTGCGTCTG
CTGGTCACGGCTTGAATTTCCAGCACGGCGGGCATCGCTTGGTGTGGTACAACCTGCCCGATAATAACGAGCATTATATG
CAAGCGAATGCTCGTCTACATCGCATTGGTCAAAAGAATCCCGTGACCATTCACCGCATTATTACCGCTGATACTTATGA
TGCGAATATGCCGGCGATTCTGGCCGGTAAAGCAAATAGACAGCAACGTCTCATCGACGCCGTGCGCCGTGATCCAGTCT
AA

Upstream 100 bases:

>100_bases
CCTCCCCGGCCACACGCCCCAGAGGGGTTCTTTTTCATCCTTTTTAAAATATACTTATATGTATTAATCCCCTCTTTGTG
CAGCATAGGAGACTACTGCT

Downstream 100 bases:

>100_bases
GACCGGCACGATCGCACCGTTATAGCTAATCAGCACCACCTACAACACCACAAACACACCCCAATCAGCATGATCGTGCC
GGTTGGGGTGTGTCTTATCC

Product: superfamily II DNA/RNA helicase

Products: NA

Alternate protein names: SNF2 Domain Protein; SNF2 Domain-Containing Protein; SNF2-Like Protein; SNF2 Family DNA/RNA Helicase; Phage-Associated Helicase; Helicase; Phage Related DNA Helicase; Superfamily II DNA/RNA Helicase; Phage-Related DNA Helicase; Phage-Associated Helicase Snf2 Family; SNF2 Family Helicase; SNF2 Related Protein; SWI/SNF Chromatin-Remodeling Complex Subunit; Prophage; SNF2 Family Protein; Phage-Associated Protein; Phage DNA Helicase Partial; APSE-2 Prophage; SNF2

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MTSTTQPGTTPELSADTHSEPWDVVIENTLEPFQKVVRQFIIDRPYSGIFLTMGGGKTLTTLSALTYIQPPGHILVVAPL
NISRLTWPEEVRKWNIPVNAISLITNERGTKLTRAKRLKLYEETATTPPTLYYITINLLEDIVNYFGDRWPFWTVIIDES
QTISDISSKRTRALFSVRPYIGRLILLTGTPSANKFDSIYAQVAVLDYGASLGDNIDVFRARWCAPDIITDKQVRRWKPA
NKQAEAEVYRTISHLVMSAVNTDIKLPPLHFVDHEVHMSDDEHRDYELFKKDAVLAALLDMAEENEGGEGADDTDAADSA
TTTPPASSQPTNPAIPAGLLQAIQQTQDTNGRAIAPVTTAELDHFDDLPVQRQEDLGTLVVISAVHAATLRMKLLQYAGG
AVYVDPEDSAQSQDLDASTARDVIDATNTAMTTITSRPTMIVHLHKVRKVIEILCNPALGGEPVNIDQDETGKQVYTPTP
TLVAYRFISDKEILLHYLAQAGVQGVEVFDGSPDMLSRWNAGRIPVLLLQPASAGHGLNFQHGGHRLVWYNLPDNNEHYM
QANARLHRIGQKNPVTIHRIITADTYDANMPAILAGKANRQQRLIDAVRRDPV

Sequences:

>Translated_613_residues
MTSTTQPGTTPELSADTHSEPWDVVIENTLEPFQKVVRQFIIDRPYSGIFLTMGGGKTLTTLSALTYIQPPGHILVVAPL
NISRLTWPEEVRKWNIPVNAISLITNERGTKLTRAKRLKLYEETATTPPTLYYITINLLEDIVNYFGDRWPFWTVIIDES
QTISDISSKRTRALFSVRPYIGRLILLTGTPSANKFDSIYAQVAVLDYGASLGDNIDVFRARWCAPDIITDKQVRRWKPA
NKQAEAEVYRTISHLVMSAVNTDIKLPPLHFVDHEVHMSDDEHRDYELFKKDAVLAALLDMAEENEGGEGADDTDAADSA
TTTPPASSQPTNPAIPAGLLQAIQQTQDTNGRAIAPVTTAELDHFDDLPVQRQEDLGTLVVISAVHAATLRMKLLQYAGG
AVYVDPEDSAQSQDLDASTARDVIDATNTAMTTITSRPTMIVHLHKVRKVIEILCNPALGGEPVNIDQDETGKQVYTPTP
TLVAYRFISDKEILLHYLAQAGVQGVEVFDGSPDMLSRWNAGRIPVLLLQPASAGHGLNFQHGGHRLVWYNLPDNNEHYM
QANARLHRIGQKNPVTIHRIITADTYDANMPAILAGKANRQQRLIDAVRRDPV
>Mature_612_residues
TSTTQPGTTPELSADTHSEPWDVVIENTLEPFQKVVRQFIIDRPYSGIFLTMGGGKTLTTLSALTYIQPPGHILVVAPLN
ISRLTWPEEVRKWNIPVNAISLITNERGTKLTRAKRLKLYEETATTPPTLYYITINLLEDIVNYFGDRWPFWTVIIDESQ
TISDISSKRTRALFSVRPYIGRLILLTGTPSANKFDSIYAQVAVLDYGASLGDNIDVFRARWCAPDIITDKQVRRWKPAN
KQAEAEVYRTISHLVMSAVNTDIKLPPLHFVDHEVHMSDDEHRDYELFKKDAVLAALLDMAEENEGGEGADDTDAADSAT
TTPPASSQPTNPAIPAGLLQAIQQTQDTNGRAIAPVTTAELDHFDDLPVQRQEDLGTLVVISAVHAATLRMKLLQYAGGA
VYVDPEDSAQSQDLDASTARDVIDATNTAMTTITSRPTMIVHLHKVRKVIEILCNPALGGEPVNIDQDETGKQVYTPTPT
LVAYRFISDKEILLHYLAQAGVQGVEVFDGSPDMLSRWNAGRIPVLLLQPASAGHGLNFQHGGHRLVWYNLPDNNEHYMQ
ANARLHRIGQKNPVTIHRIITADTYDANMPAILAGKANRQQRLIDAVRRDPV

Specific function: Unknown

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67982; Mature: 67851

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTTQPGTTPELSADTHSEPWDVVIENTLEPFQKVVRQFIIDRPYSGIFLTMGGGKTLT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH
TLSALTYIQPPGHILVVAPLNISRLTWPEEVRKWNIPVNAISLITNERGTKLTRAKRLKL
HHHHHHEECCCCCEEEEECCCCCCCCCHHHHHCCCCCHHEEEEEECCCCCHHHHHHHHHH
YEETATTPPTLYYITINLLEDIVNYFGDRWPFWTVIIDESQTISDISSKRTRALFSVRPY
HHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHEECCC
IGRLILLTGTPSANKFDSIYAQVAVLDYGASLGDNIDVFRARWCAPDIITDKQVRRWKPA
CCEEEEEECCCCCCHHHHHHHHHEEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHHCCCC
NKQAEAEVYRTISHLVMSAVNTDIKLPPLHFVDHEVHMSDDEHRDYELFKKDAVLAALLD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEECCCCCCCHHHHHHHHHHHHHHHH
MAEENEGGEGADDTDAADSATTTPPASSQPTNPAIPAGLLQAIQQTQDTNGRAIAPVTTA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEHH
ELDHFDDLPVQRQEDLGTLVVISAVHAATLRMKLLQYAGGAVYVDPEDSAQSQDLDASTA
CCCCCCCCCCCCHHCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHH
RDVIDATNTAMTTITSRPTMIVHLHKVRKVIEILCNPALGGEPVNIDQDETGKQVYTPTP
HHHHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCC
TLVAYRFISDKEILLHYLAQAGVQGVEVFDGSPDMLSRWNAGRIPVLLLQPASAGHGLNF
HHEEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCCCC
QHGGHRLVWYNLPDNNEHYMQANARLHRIGQKNPVTIHRIITADTYDANMPAILAGKANR
CCCCCEEEEEECCCCCCCEEECCCHHHHCCCCCCEEEEEEEEECCCCCCCCEEEECCCCH
QQRLIDAVRRDPV
HHHHHHHHHCCCC
>Mature Secondary Structure 
TSTTQPGTTPELSADTHSEPWDVVIENTLEPFQKVVRQFIIDRPYSGIFLTMGGGKTLT
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH
TLSALTYIQPPGHILVVAPLNISRLTWPEEVRKWNIPVNAISLITNERGTKLTRAKRLKL
HHHHHHEECCCCCEEEEECCCCCCCCCHHHHHCCCCCHHEEEEEECCCCCHHHHHHHHHH
YEETATTPPTLYYITINLLEDIVNYFGDRWPFWTVIIDESQTISDISSKRTRALFSVRPY
HHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHEECCC
IGRLILLTGTPSANKFDSIYAQVAVLDYGASLGDNIDVFRARWCAPDIITDKQVRRWKPA
CCEEEEEECCCCCCHHHHHHHHHEEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHHCCCC
NKQAEAEVYRTISHLVMSAVNTDIKLPPLHFVDHEVHMSDDEHRDYELFKKDAVLAALLD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEECCCCCCCHHHHHHHHHHHHHHHH
MAEENEGGEGADDTDAADSATTTPPASSQPTNPAIPAGLLQAIQQTQDTNGRAIAPVTTA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEHH
ELDHFDDLPVQRQEDLGTLVVISAVHAATLRMKLLQYAGGAVYVDPEDSAQSQDLDASTA
CCCCCCCCCCCCHHCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHH
RDVIDATNTAMTTITSRPTMIVHLHKVRKVIEILCNPALGGEPVNIDQDETGKQVYTPTP
HHHHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCC
TLVAYRFISDKEILLHYLAQAGVQGVEVFDGSPDMLSRWNAGRIPVLLLQPASAGHGLNF
HHEEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCCCC
QHGGHRLVWYNLPDNNEHYMQANARLHRIGQKNPVTIHRIITADTYDANMPAILAGKANR
CCCCCEEEEEECCCCCCCEEECCCHHHHCCCCCCEEEEEEEEECCCCCCCCEEEECCCCH
QQRLIDAVRRDPV
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA