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The map label for this gene is yybJ [H]

Identifier: 62390569

GI number: 62390569

Start: 1793314

End: 1793913

Strand: Direct

Name: yybJ [H]

Synonym: cg1903

Alternate gene names: 62390569

Gene position: 1793314-1793913 (Clockwise)

Preceding gene: 62390566

Following gene: 62390570

Centisome position: 54.63

GC content: 41.17

Gene sequence:

>600_bases
ATGCTTTCAATTTGCGCAAAAATTGGATATTCGACGACAATTGCAGAAGTGGAAATGAACTTCCGAAAGGGACAAACATA
TGGTATTTGCGGTGAAAACGGATCTGGAAAATCGACACTTCTTCGCACCCTGTGCGGGGAAATCCATCCAATTGACGGGT
ATGCAACTATAGATGACCAAAGTGTCACCGAACCAAGTTCTATCGGTAAAATTATAAAGATTTCTACCCCCGAATTCTAT
CCCGATATTTCAATTGGAGAGCACTTTAAGATACTGACTAAAACCACAAAGGTGGACTATGATGACGCCATTAAACGCTG
GAATCTGGAAAAACTCCTTGAGAAATCACCTAATCGAGTATCGAGCGGGCAGCAACAACGCAGCTTTCTAGCTTTACAAT
TGGGGGTGAAATGCGATGTGATTGTCTTGGATGAGCCGGAGAGGCATTTAGATTCTTTCTGGATAAGAATCCTATCGGAG
GAACTGAAAGACCGAGCCAAAAGTGGTACGACTGTGATTTTAGCCAGTCATTCACAAGAGATTCTTAAAGTTTGTGACGA
GGTAATCTCACTCGAAAGATATTTAAATGCAAATAAATAA

Upstream 100 bases:

>100_bases
TGCCACATACCAATAAGTGACATCGGCTAAAACTAATAATTTTCGAAACTTCATGGTCGATTTCGATGGGTTAATACATG
AACCTCAGATAGGATTCTAA

Downstream 100 bases:

>100_bases
AGTGATCAAATTTGCAATACTGTTGGCTGTTGTCTTAGGTATTTCGTTTTCAACGGTGTCGTGGGTTTTTGATCAATACA
AATTGAATGCAAATGATTAC

Product: ABC-type multidrug transport system, ATPase component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MLSICAKIGYSTTIAEVEMNFRKGQTYGICGENGSGKSTLLRTLCGEIHPIDGYATIDDQSVTEPSSIGKIIKISTPEFY
PDISIGEHFKILTKTTKVDYDDAIKRWNLEKLLEKSPNRVSSGQQQRSFLALQLGVKCDVIVLDEPERHLDSFWIRILSE
ELKDRAKSGTTVILASHSQEILKVCDEVISLERYLNANK

Sequences:

>Translated_199_residues
MLSICAKIGYSTTIAEVEMNFRKGQTYGICGENGSGKSTLLRTLCGEIHPIDGYATIDDQSVTEPSSIGKIIKISTPEFY
PDISIGEHFKILTKTTKVDYDDAIKRWNLEKLLEKSPNRVSSGQQQRSFLALQLGVKCDVIVLDEPERHLDSFWIRILSE
ELKDRAKSGTTVILASHSQEILKVCDEVISLERYLNANK
>Mature_199_residues
MLSICAKIGYSTTIAEVEMNFRKGQTYGICGENGSGKSTLLRTLCGEIHPIDGYATIDDQSVTEPSSIGKIIKISTPEFY
PDISIGEHFKILTKTTKVDYDDAIKRWNLEKLLEKSPNRVSSGQQQRSFLALQLGVKCDVIVLDEPERHLDSFWIRILSE
ELKDRAKSGTTVILASHSQEILKVCDEVISLERYLNANK

Specific function: Part Of The Abc Transporter Complex Fbpabc Involved In Ferric Cations Import. Responsible For Energy Coupling To The Transport System (By Similarity). [C]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=186, Percent_Identity=26.8817204301075, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI47078218, Length=186, Percent_Identity=26.8817204301075, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI89111135, Length=182, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI87081709, Length=202, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87081791, Length=178, Percent_Identity=25.8426966292135, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789032, Length=202, Percent_Identity=25.2475247524752, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1788761, Length=211, Percent_Identity=24.6445497630332, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790467, Length=190, Percent_Identity=27.3684210526316, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI1787758, Length=185, Percent_Identity=28.6486486486486, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI87081782, Length=202, Percent_Identity=22.7722772277228, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1787029, Length=189, Percent_Identity=24.8677248677249, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1786872, Length=182, Percent_Identity=30.2197802197802, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787370, Length=191, Percent_Identity=24.0837696335079, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786803, Length=163, Percent_Identity=30.0613496932515, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17569081, Length=194, Percent_Identity=26.8041237113402, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324314, Length=187, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: 3.6.3.30 [C]

Molecular weight: Translated: 22297; Mature: 22297

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSICAKIGYSTTIAEVEMNFRKGQTYGICGENGSGKSTLLRTLCGEIHPIDGYATIDDQ
CCCHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCC
SVTEPSSIGKIIKISTPEFYPDISIGEHFKILTKTTKVDYDDAIKRWNLEKLLEKSPNRV
CCCCHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHCCCCCC
SSGQQQRSFLALQLGVKCDVIVLDEPERHLDSFWIRILSEELKDRAKSGTTVILASHSQE
CCCHHHHHEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
ILKVCDEVISLERYLNANK
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSICAKIGYSTTIAEVEMNFRKGQTYGICGENGSGKSTLLRTLCGEIHPIDGYATIDDQ
CCCHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCC
SVTEPSSIGKIIKISTPEFYPDISIGEHFKILTKTTKVDYDDAIKRWNLEKLLEKSPNRV
CCCCHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHCCCCCC
SSGQQQRSFLALQLGVKCDVIVLDEPERHLDSFWIRILSEELKDRAKSGTTVILASHSQE
CCCHHHHHEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
ILKVCDEVISLERYLNANK
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938973; 7584024; 9384377 [H]