| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
Click here to switch to the map view.
The map label for this gene is 62390562
Identifier: 62390562
GI number: 62390562
Start: 1787201
End: 1788316
Strand: Reverse
Name: 62390562
Synonym: cg1896
Alternate gene names: NA
Gene position: 1788316-1787201 (Counterclockwise)
Preceding gene: 62390563
Following gene: 62390561
Centisome position: 54.48
GC content: 53.14
Gene sequence:
>1116_bases ATGTCTTTGAAGCTTAATTCTCGTCGTCTTGCATCCATTGCTGTCGCTGTTGCAGTCGGTGTCTCTGGTGTTGCTGCTGT TGGTGCGGCACCAGCTACGGCTCAGCAGGTAGGTGCTGGTACCCCGATTCACGTTGTCAACCTTGATCGCACCGTTGTTG ATCCAGTGACTGGTGACATCACCTTCCACTTCACCGACGGCACTTTTGTCACCCTCAAGGCGGGTGTTGATGGCAAGGAT GGTACCGATGGCCAAGATGGTGTGATCGGCAAGGACGCAACCATTGTTGATGTCGCTACGGAGTCCAATGGTGATGTCAA GCTCACCTTCTCTGATGGCACCGTCGTCACCATTCCTGCAGCTAAGGACGGTGTGGATGGTGAAGATGGCAAGGATGGCG AGGACGCTACTGTGGTGTCTACTGCGACTGACGCCAACGGCAATATCGTCATTACGTTCTCTGATGGCTCTGTGCTTGTT GTTGCTAACGGTAAGGACGGCAACGATGGCTCAGACGGCCAGGATGGTGCTGATGGTGAAAATGGCAAGGATGGTGAGAA CGGCGCTAACGCGACCATTGTCGATCAGATTGCCAATGACGATGGTTCCATTACCATTGTGTTCTCCGATGGTTCTGAGG TCACTATCCCAGCGCCAGCTAAGGGTGCCACCGATGAGCTGGCACAGTGTCTGCTGAACCCGAAGATGTTGCTGCTGGCA GCAATTCCTGCTGCAGGTGCTATTGCTAACGCTGTGGCACCGGCGATCCCACGTGTTGTTGAAGATGTGCGTGCACAGTT CAATCTTCCAAGCCTCAACCCCCAGTTTGATCAGTGGCTCTACAACGCGACCAAGGATATTGATGCAGGGTTGTTGATCT CTGGTGCTACCGGCCTTGCTGTGCTGTCGGTGCTCGCTGATGATTTCTGTGGCGACATTGATGCCGATGACAACGCAGAT GGTGACGTGGCGGCAGAAAAGCCAACTGGCTCTTCTGGGCTTGGATCATCTGAACAGAGTGAAAAGGTTGATGGTGACGA CGATAGTGTGATCGACACTGAAACTGATGCAGATCTCGAAGTAGAAGAAGACCCTGAGCTTGTTAACGCAGGTTAA
Upstream 100 bases:
>100_bases TCGGTCTTGGTGGCGGCTCCGTCATTAGTTCCAGTAAGTAGTTTTTTCACTCCCTGTTTTGAGTTTTTTTCTCACCTTTA TATAGATAAGGAATATTCAC
Downstream 100 bases:
>100_bases CGCCAGTGTAATGCTGGATTAATACAGCAGCATGAAGAAAAACCTTTAAGAAATTTTCTTAAAGGTTTTTTAGTTTTCTG GGGACATGTAAGAAGTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSLKLNSRRLASIAVAVAVGVSGVAAVGAAPATAQQVGAGTPIHVVNLDRTVVDPVTGDITFHFTDGTFVTLKAGVDGKD GTDGQDGVIGKDATIVDVATESNGDVKLTFSDGTVVTIPAAKDGVDGEDGKDGEDATVVSTATDANGNIVITFSDGSVLV VANGKDGNDGSDGQDGADGENGKDGENGANATIVDQIANDDGSITIVFSDGSEVTIPAPAKGATDELAQCLLNPKMLLLA AIPAAGAIANAVAPAIPRVVEDVRAQFNLPSLNPQFDQWLYNATKDIDAGLLISGATGLAVLSVLADDFCGDIDADDNAD GDVAAEKPTGSSGLGSSEQSEKVDGDDDSVIDTETDADLEVEEDPELVNAG
Sequences:
>Translated_371_residues MSLKLNSRRLASIAVAVAVGVSGVAAVGAAPATAQQVGAGTPIHVVNLDRTVVDPVTGDITFHFTDGTFVTLKAGVDGKD GTDGQDGVIGKDATIVDVATESNGDVKLTFSDGTVVTIPAAKDGVDGEDGKDGEDATVVSTATDANGNIVITFSDGSVLV VANGKDGNDGSDGQDGADGENGKDGENGANATIVDQIANDDGSITIVFSDGSEVTIPAPAKGATDELAQCLLNPKMLLLA AIPAAGAIANAVAPAIPRVVEDVRAQFNLPSLNPQFDQWLYNATKDIDAGLLISGATGLAVLSVLADDFCGDIDADDNAD GDVAAEKPTGSSGLGSSEQSEKVDGDDDSVIDTETDADLEVEEDPELVNAG >Mature_370_residues SLKLNSRRLASIAVAVAVGVSGVAAVGAAPATAQQVGAGTPIHVVNLDRTVVDPVTGDITFHFTDGTFVTLKAGVDGKDG TDGQDGVIGKDATIVDVATESNGDVKLTFSDGTVVTIPAAKDGVDGEDGKDGEDATVVSTATDANGNIVITFSDGSVLVV ANGKDGNDGSDGQDGADGENGKDGENGANATIVDQIANDDGSITIVFSDGSEVTIPAPAKGATDELAQCLLNPKMLLLAA IPAAGAIANAVAPAIPRVVEDVRAQFNLPSLNPQFDQWLYNATKDIDAGLLISGATGLAVLSVLADDFCGDIDADDNADG DVAAEKPTGSSGLGSSEQSEKVDGDDDSVIDTETDADLEVEEDPELVNAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37208; Mature: 37076
Theoretical pI: Translated: 3.63; Mature: 3.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKLNSRRLASIAVAVAVGVSGVAAVGAAPATAQQVGAGTPIHVVNLDRTVVDPVTGDI CCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCHHHHHCCCCCEEEEECCCEEECCCCCCE TFHFTDGTFVTLKAGVDGKDGTDGQDGVIGKDATIVDVATESNGDVKLTFSDGTVVTIPA EEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEEC AKDGVDGEDGKDGEDATVVSTATDANGNIVITFSDGSVLVVANGKDGNDGSDGQDGADGE CCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCC NGKDGENGANATIVDQIANDDGSITIVFSDGSEVTIPAPAKGATDELAQCLLNPKMLLLA CCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCEEEEE AIPAAGAIANAVAPAIPRVVEDVRAQFNLPSLNPQFDQWLYNATKDIDAGLLISGATGLA ECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHH VLSVLADDFCGDIDADDNADGDVAAEKPTGSSGLGSSEQSEKVDGDDDSVIDTETDADLE HHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEE VEEDPELVNAG ECCCCCCCCCC >Mature Secondary Structure SLKLNSRRLASIAVAVAVGVSGVAAVGAAPATAQQVGAGTPIHVVNLDRTVVDPVTGDI CCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCHHHHHCCCCCEEEEECCCEEECCCCCCE TFHFTDGTFVTLKAGVDGKDGTDGQDGVIGKDATIVDVATESNGDVKLTFSDGTVVTIPA EEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEEC AKDGVDGEDGKDGEDATVVSTATDANGNIVITFSDGSVLVVANGKDGNDGSDGQDGADGE CCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCC NGKDGENGANATIVDQIANDDGSITIVFSDGSEVTIPAPAKGATDELAQCLLNPKMLLLA CCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCEEEEE AIPAAGAIANAVAPAIPRVVEDVRAQFNLPSLNPQFDQWLYNATKDIDAGLLISGATGLA ECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHH VLSVLADDFCGDIDADDNADGDVAAEKPTGSSGLGSSEQSEKVDGDDDSVIDTETDADLE HHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEE VEEDPELVNAG ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA