| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
Click here to switch to the map view.
The map label for this gene is 62390549
Identifier: 62390549
GI number: 62390549
Start: 1769503
End: 1770468
Strand: Reverse
Name: 62390549
Synonym: cg1877
Alternate gene names: NA
Gene position: 1770468-1769503 (Counterclockwise)
Preceding gene: 62390550
Following gene: 62390548
Centisome position: 53.93
GC content: 56.42
Gene sequence:
>966_bases ATGAAGCCGAAGGATTTCTGCACAGCGGAAAATTGGGCGGAGAATTTAAGCGCACTGGGCTATCTAGCTGGTTGGCGTTT TGTCCGGATGCTCCCTTTGCCTATTGCTCGCCGGGTGTTTGACCTTGGGGCGGATCTGGCGTCGAAAAGCGGAAAAGGCA TGGGGCAGCTACGCGCTAATCTGGCGCGGGTGGTCGGTGCGGAAAACGTTACGCAGGCGCTGGTGAAGCAAGCAACGCGC AGCTATGCGCGGTATTGGCTGGAAGCGTTCCGGCTACCGGCGATCGCGCGAGATCCTGAGCTGCTTGCGCGGTTGCGTAA GGGAACTGTTGGCCTAGATTTGTTGGATGAATCTTTGGCTGCCGGCAAGGGCGTAGTTTTGACGCTCCCACACAGCGGCA ACTGGGATATGGCTGGCGCTTTTCTGATTAGCCATCATGGGCAATTCACCACCGTTGCAGAAAGGGTCAAGCCGGAACGC TTGTTTGAAGCGTTCGTGGAGTTTCGAGAAAGCCTTGGATTTGAGGTGCTGCCTCTCACCGGTGGCGAGCGTCCGCCGTT TGAAAAGCTGAAAGAGCGCCTGACATCTGGAGGTATCGTGTGCCTTCTTGGGGAGCGTGACCTGCGGCATTCCGGCGTGG AGACCACTTTTTTTGGTGAGAAGACCTCCATGCCAGCAGGACCTGCGCAGCTGGCCATTGAAACAGGTGCGGCGCTGCAC GTGGTGCATCCATGGTTCGATGACGACGGCTGGGGTCTCAGCGTATCCGATGCCGTGACCGTGGATAATTTATCCGACAC GGTGCAGCGGATCGCACATCTTTTTATGGCAAATATTACGGCGCACCCCGCTGATTGGCATATGCTCCAACCCCTGTGGT TTGGTGATTTGGATCCGGAGCGTCTCAAGCGCTCTAGGGAGCAGACAAATGTTCACAAACCGGTGGCATTACAGGAGGAC AATTAG
Upstream 100 bases:
>100_bases GCTGGAAAGTCCCCATTGGCTAAGGAATTTACCAAGGCACCAGCAGGTGCGAAGGCAGATTACAGCAACACCAAATAAAA ATTAGCCGAGGGAGCATCGC
Downstream 100 bases:
>100_bases GTGCGAATTGGAATGGTCTGCCCGTACTCCTTCGATGAGCCGGGCGGTGTTCAAGCGCATATCCTTGACTTAGCGCGAAC CTTCATTGCCCAAGGCCATG
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: PIM acyltransferase [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MKPKDFCTAENWAENLSALGYLAGWRFVRMLPLPIARRVFDLGADLASKSGKGMGQLRANLARVVGAENVTQALVKQATR SYARYWLEAFRLPAIARDPELLARLRKGTVGLDLLDESLAAGKGVVLTLPHSGNWDMAGAFLISHHGQFTTVAERVKPER LFEAFVEFRESLGFEVLPLTGGERPPFEKLKERLTSGGIVCLLGERDLRHSGVETTFFGEKTSMPAGPAQLAIETGAALH VVHPWFDDDGWGLSVSDAVTVDNLSDTVQRIAHLFMANITAHPADWHMLQPLWFGDLDPERLKRSREQTNVHKPVALQED N
Sequences:
>Translated_321_residues MKPKDFCTAENWAENLSALGYLAGWRFVRMLPLPIARRVFDLGADLASKSGKGMGQLRANLARVVGAENVTQALVKQATR SYARYWLEAFRLPAIARDPELLARLRKGTVGLDLLDESLAAGKGVVLTLPHSGNWDMAGAFLISHHGQFTTVAERVKPER LFEAFVEFRESLGFEVLPLTGGERPPFEKLKERLTSGGIVCLLGERDLRHSGVETTFFGEKTSMPAGPAQLAIETGAALH VVHPWFDDDGWGLSVSDAVTVDNLSDTVQRIAHLFMANITAHPADWHMLQPLWFGDLDPERLKRSREQTNVHKPVALQED N >Mature_321_residues MKPKDFCTAENWAENLSALGYLAGWRFVRMLPLPIARRVFDLGADLASKSGKGMGQLRANLARVVGAENVTQALVKQATR SYARYWLEAFRLPAIARDPELLARLRKGTVGLDLLDESLAAGKGVVLTLPHSGNWDMAGAFLISHHGQFTTVAERVKPER LFEAFVEFRESLGFEVLPLTGGERPPFEKLKERLTSGGIVCLLGERDLRHSGVETTFFGEKTSMPAGPAQLAIETGAALH VVHPWFDDDGWGLSVSDAVTVDNLSDTVQRIAHLFMANITAHPADWHMLQPLWFGDLDPERLKRSREQTNVHKPVALQED N
Specific function: Catalyzes the acylation to the position 6 of the alpha- 1,2-linked mannose residue of the phosphatidyl-myo-inositol dimannoside (PIM2) or monomannoside (PIM1) [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: NA
Molecular weight: Translated: 35544; Mature: 35544
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKDFCTAENWAENLSALGYLAGWRFVRMLPLPIARRVFDLGADLASKSGKGMGQLRAN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH LARVVGAENVTQALVKQATRSYARYWLEAFRLPAIARDPELLARLRKGTVGLDLLDESLA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHH AGKGVVLTLPHSGNWDMAGAFLISHHGQFTTVAERVKPERLFEAFVEFRESLGFEVLPLT CCCCEEEECCCCCCCCHHHHHEECCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECC GGERPPFEKLKERLTSGGIVCLLGERDLRHSGVETTFFGEKTSMPAGPAQLAIETGAALH CCCCCCHHHHHHHHCCCCEEEEECCCCHHHCCCCEEECCCCCCCCCCCHHEEEECCCEEE VVHPWFDDDGWGLSVSDAVTVDNLSDTVQRIAHLFMANITAHPADWHMLQPLWFGDLDPE EEECCCCCCCCCEECCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHCCCCCHH RLKRSREQTNVHKPVALQEDN HHHHHHHHCCCCCCEEEECCC >Mature Secondary Structure MKPKDFCTAENWAENLSALGYLAGWRFVRMLPLPIARRVFDLGADLASKSGKGMGQLRAN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH LARVVGAENVTQALVKQATRSYARYWLEAFRLPAIARDPELLARLRKGTVGLDLLDESLA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHH AGKGVVLTLPHSGNWDMAGAFLISHHGQFTTVAERVKPERLFEAFVEFRESLGFEVLPLT CCCCEEEECCCCCCCCHHHHHEECCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECC GGERPPFEKLKERLTSGGIVCLLGERDLRHSGVETTFFGEKTSMPAGPAQLAIETGAALH CCCCCCHHHHHHHHCCCCEEEEECCCCHHHCCCCEEECCCCCCCCCCCHHEEEECCCEEE VVHPWFDDDGWGLSVSDAVTVDNLSDTVQRIAHLFMANITAHPADWHMLQPLWFGDLDPE EEECCCCCCCCCEECCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHCCCCCHH RLKRSREQTNVHKPVALQEDN HHHHHHHHCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA