Click here to switch to the map view.

The map label for this gene is ywcH [H]

Identifier: 62390525

GI number: 62390525

Start: 1744170

End: 1745285

Strand: Direct

Name: ywcH [H]

Synonym: cg1848

Alternate gene names: 62390525

Gene position: 1744170-1745285 (Clockwise)

Preceding gene: 62390524

Following gene: 62390526

Centisome position: 53.13

GC content: 57.71

Gene sequence:

>1116_bases
ATGCAATTCGGCATCTTCACCATTGGCGACGTCACCGTAGACCCCACCACCGGCAAAGCCCCCACCGAAGGCGAACGCAT
CCACGCGATGACCCAAATCGCACTCAAGGCTGAAGAAGTAGGCCTCGATGTCTTTGCCACCGGCGAGCACCACAACCCAC
CATTTGTACCCTCCTCCCCAACCACACACTTAGCCTATATTGCAGCGAAAACCGAGAAGCTCCTGCTCTCTACCTCTACC
ACGCTGATCACCACCAACGACCCGGTAAAAATCGCCGAAGATTACACCTTCCTCCAGCACCTCTCCGGCGGCCGTGTTGA
CCTTATGATGGGCCGTGGCAACACCGGACCCGTTTACCCATGGTTTGGCAAAGACATCCACCAAGGCATCCCACTAGCGA
TTGAAAACTACCACCTCCTGCGCCGCCTCTGGCGCGAAGACGTAGTCAACTGGCAGGGCAAATTCCGCACACCGTTGCAG
GGATACACCTCTACCCCAGCACCATTAGACGGCGTTGCACCATTCGTCTGGCACGGCTCCATCCGCTCCACCGAAATCGC
AGAGCAAGCAGCCTTCTATGGCGACGGCTTCTTCCACAACAACATCTTCTGGAACAAAGAGCACACCGCCCAAATGGTCA
ACCTCTACCGCCAGCGTTTCGAACACTACGGACACGGCCAAGCAGACCAGGCCATCGTGGGACTCGGTGGCCAAGTCTTC
ATCGGCGATTCTGAAGAAGAAGCAAAGAAGACCTTCCGCCCCTACTTCGACAACGCCCCTGTCTACGGACACGGACCATC
ACTTGAAGATTTCTCCCGCCTGACCCCACTAACCGTCGGTACCGCTGAGCAAGTTATCGAACGCACCATGGAATTCGCCG
ACTGGGTAGGCGATTACCAGCGCCAGCTCTTCCTCATCGACCACGCCGGCCTGCCACTAGAAATGGTCCTTGATCAGATC
GAACGCCTCGGCCACGATGTCGTCCCAGAGGTACGCCGCCGCATGGAGGAGCGTCGCCCAGACCACGTTCCCTCCAACCC
ACCAACCCACCAGAGCCTGAAGGCCAACCGAAACAGCCCTCACTTCCAGATCAACCCTGGTCAGCCAACTGAGTAG

Upstream 100 bases:

>100_bases
ATCTATTAGTCATACCTATTTAGAATTTTTGTTGACGCATCCATTAAAAACTGCTAGTTTGGTGACATATCAACAAACTT
AGTTGGAAGGACACATTACC

Downstream 100 bases:

>100_bases
TTTTTCTGAAACTAAGGAGACACATTATGCGAAAGCTCACTGTTGTTACCGCAGGCCTTTCTAACCCGTCCACCACTCGC
TCCGTGGCGGATCAACTCAC

Product: coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase or related flavin-dependent

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MQFGIFTIGDVTVDPTTGKAPTEGERIHAMTQIALKAEEVGLDVFATGEHHNPPFVPSSPTTHLAYIAAKTEKLLLSTST
TLITTNDPVKIAEDYTFLQHLSGGRVDLMMGRGNTGPVYPWFGKDIHQGIPLAIENYHLLRRLWREDVVNWQGKFRTPLQ
GYTSTPAPLDGVAPFVWHGSIRSTEIAEQAAFYGDGFFHNNIFWNKEHTAQMVNLYRQRFEHYGHGQADQAIVGLGGQVF
IGDSEEEAKKTFRPYFDNAPVYGHGPSLEDFSRLTPLTVGTAEQVIERTMEFADWVGDYQRQLFLIDHAGLPLEMVLDQI
ERLGHDVVPEVRRRMEERRPDHVPSNPPTHQSLKANRNSPHFQINPGQPTE

Sequences:

>Translated_371_residues
MQFGIFTIGDVTVDPTTGKAPTEGERIHAMTQIALKAEEVGLDVFATGEHHNPPFVPSSPTTHLAYIAAKTEKLLLSTST
TLITTNDPVKIAEDYTFLQHLSGGRVDLMMGRGNTGPVYPWFGKDIHQGIPLAIENYHLLRRLWREDVVNWQGKFRTPLQ
GYTSTPAPLDGVAPFVWHGSIRSTEIAEQAAFYGDGFFHNNIFWNKEHTAQMVNLYRQRFEHYGHGQADQAIVGLGGQVF
IGDSEEEAKKTFRPYFDNAPVYGHGPSLEDFSRLTPLTVGTAEQVIERTMEFADWVGDYQRQLFLIDHAGLPLEMVLDQI
ERLGHDVVPEVRRRMEERRPDHVPSNPPTHQSLKANRNSPHFQINPGQPTE
>Mature_371_residues
MQFGIFTIGDVTVDPTTGKAPTEGERIHAMTQIALKAEEVGLDVFATGEHHNPPFVPSSPTTHLAYIAAKTEKLLLSTST
TLITTNDPVKIAEDYTFLQHLSGGRVDLMMGRGNTGPVYPWFGKDIHQGIPLAIENYHLLRRLWREDVVNWQGKFRTPLQ
GYTSTPAPLDGVAPFVWHGSIRSTEIAEQAAFYGDGFFHNNIFWNKEHTAQMVNLYRQRFEHYGHGQADQAIVGLGGQVF
IGDSEEEAKKTFRPYFDNAPVYGHGPSLEDFSRLTPLTVGTAEQVIERTMEFADWVGDYQRQLFLIDHAGLPLEMVLDQI
ERLGHDVVPEVRRRMEERRPDHVPSNPPTHQSLKANRNSPHFQINPGQPTE

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 41775; Mature: 41775

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFGIFTIGDVTVDPTTGKAPTEGERIHAMTQIALKAEEVGLDVFATGEHHNPPFVPSSP
CCEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCC
TTHLAYIAAKTEKLLLSTSTTLITTNDPVKIAEDYTFLQHLSGGRVDLMMGRGNTGPVYP
CCEEEEEEECCCEEEEECCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
WFGKDIHQGIPLAIENYHLLRRLWREDVVNWQGKFRTPLQGYTSTPAPLDGVAPFVWHGS
CCCCHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECC
IRSTEIAEQAAFYGDGFFHNNIFWNKEHTAQMVNLYRQRFEHYGHGQADQAIVGLGGQVF
CCCHHHHHHHHHHCCCEEECCEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEE
IGDSEEEAKKTFRPYFDNAPVYGHGPSLEDFSRLTPLTVGTAEQVIERTMEFADWVGDYQ
ECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
RQLFLIDHAGLPLEMVLDQIERLGHDVVPEVRRRMEERRPDHVPSNPPTHQSLKANRNSP
HEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
HFQINPGQPTE
CEEECCCCCCC
>Mature Secondary Structure
MQFGIFTIGDVTVDPTTGKAPTEGERIHAMTQIALKAEEVGLDVFATGEHHNPPFVPSSP
CCEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCC
TTHLAYIAAKTEKLLLSTSTTLITTNDPVKIAEDYTFLQHLSGGRVDLMMGRGNTGPVYP
CCEEEEEEECCCEEEEECCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
WFGKDIHQGIPLAIENYHLLRRLWREDVVNWQGKFRTPLQGYTSTPAPLDGVAPFVWHGS
CCCCHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECC
IRSTEIAEQAAFYGDGFFHNNIFWNKEHTAQMVNLYRQRFEHYGHGQADQAIVGLGGQVF
CCCHHHHHHHHHHCCCEEECCEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEE
IGDSEEEAKKTFRPYFDNAPVYGHGPSLEDFSRLTPLTVGTAEQVIERTMEFADWVGDYQ
ECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
RQLFLIDHAGLPLEMVLDQIERLGHDVVPEVRRRMEERRPDHVPSNPPTHQSLKANRNSP
HEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
HFQINPGQPTE
CEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]