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The map label for this gene is yvrB [H]

Identifier: 62390509

GI number: 62390509

Start: 1723249

End: 1724325

Strand: Direct

Name: yvrB [H]

Synonym: cg1832

Alternate gene names: 62390509

Gene position: 1723249-1724325 (Clockwise)

Preceding gene: 62390500

Following gene: 62390510

Centisome position: 52.49

GC content: 58.31

Gene sequence:

>1077_bases
ATGCTTCTTTCCGCCCGCACACACACGAGTTTCCAAGAACTTGGACTCAATGCTAGTCGGCGCAAAGCAATCAACTGGAC
ACTGGCACTCACTGTGGTGCTAATTGCCTCCATGTTTGTTGGCGTGCTCATCGGTGCATCCGGGACCTCAGTGTTTTCCA
CGTGGACCGTAATTAGCCACCATCTTTTTGGCACTGAGCTAGGTGGCTCCGACACTGCCGACGCCATCATTTGGTACATC
CGCACCCCACGCGTCTTGCTCGCTGCCATTGTGGGCGCAGGCCTTGCCCTGGCAGGTGCCATCATGCAAGTACTGGTCCG
AAACATGCTGGCAGACCCCTATATCCTCGGGGTGAACTCAGGTGCCAGTTGCGGTGCGGCCGCTGCCTTACTGTTCGGAG
TGGGCGCTGGATTTGGCGATTACGCCCTCCAAGGCAGCGCGTTTCTCGGCGCAATGGCAGCTTCCGGATTGATCTTCTTC
GTGGCGCGCGCAGCGGGGCGCATCTCCTCGACCCGCTTGTTGATGTCCGGCGTAGCGATCGGATACATGCTCTCTGCGGC
AACAAGCTTTCTCATCTTCTCCTCCGACTCCGCCGAAGGCAGCCGCTCCGTGTTGTTCTGGCTGCTTGGATCCTTAGGAC
TTGCCGCATGGAATGGGCCGATGGCGATCATCTTCCTCATCGTGGGCATTGCCCTGGCGTTGCTCATGGTGTTGGGTCCG
CAATTGGATGCCTTAAACTCCGGCGATGAAACCGCACTTACCTTGGGAGTATCCCCTGATCGCCTCCGCATTCTCCTCCT
GGTGATCACCTGCCTGCTGGTGGGATCCATGGTTGCCATGGCCGGCAGCATCGGATTCATCGGCCTTGTCATCCCCCACC
TGGCCAGGCGTTTTGTTAGTGGAAAACACCGACTCATGCTGCCTGTATCCGCGTTGATGGGCGCAATTTTGCTCATCTGG
GCTGATATCGCCGCCCGCACCCTGCTTGCGCCCCAAGAGATTCCCATCGGCATCATCACCGCACTCATCGGAGCACCCTT
CCTCCTGATTCTGGTTCGCCGGATGCACACCTACTGA

Upstream 100 bases:

>100_bases
GCGCCCACTCATCGGCGAGCTTCAGGAGATGAGGTTGATGCTCCATTGATAATTTCTTTCGCTAATAGTCAAATGATCAT
TTGAGTGTTAGTGTTTTCTC

Downstream 100 bases:

>100_bases
TTTTTAAGGAATTATGCGTAAATTAGCCCTTCCCCTGGTTGCCTTCCTGACAGGAGGTTTAGCTGCATGCTCCTCTAGTG
ATGTGGTGGAAAGTCAAGGG

Product: ABC-type cobalamin/Fe3+-siderophores transport system, permease component

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MLLSARTHTSFQELGLNASRRKAINWTLALTVVLIASMFVGVLIGASGTSVFSTWTVISHHLFGTELGGSDTADAIIWYI
RTPRVLLAAIVGAGLALAGAIMQVLVRNMLADPYILGVNSGASCGAAAALLFGVGAGFGDYALQGSAFLGAMAASGLIFF
VARAAGRISSTRLLMSGVAIGYMLSAATSFLIFSSDSAEGSRSVLFWLLGSLGLAAWNGPMAIIFLIVGIALALLMVLGP
QLDALNSGDETALTLGVSPDRLRILLLVITCLLVGSMVAMAGSIGFIGLVIPHLARRFVSGKHRLMLPVSALMGAILLIW
ADIAARTLLAPQEIPIGIITALIGAPFLLILVRRMHTY

Sequences:

>Translated_358_residues
MLLSARTHTSFQELGLNASRRKAINWTLALTVVLIASMFVGVLIGASGTSVFSTWTVISHHLFGTELGGSDTADAIIWYI
RTPRVLLAAIVGAGLALAGAIMQVLVRNMLADPYILGVNSGASCGAAAALLFGVGAGFGDYALQGSAFLGAMAASGLIFF
VARAAGRISSTRLLMSGVAIGYMLSAATSFLIFSSDSAEGSRSVLFWLLGSLGLAAWNGPMAIIFLIVGIALALLMVLGP
QLDALNSGDETALTLGVSPDRLRILLLVITCLLVGSMVAMAGSIGFIGLVIPHLARRFVSGKHRLMLPVSALMGAILLIW
ADIAARTLLAPQEIPIGIITALIGAPFLLILVRRMHTY
>Mature_358_residues
MLLSARTHTSFQELGLNASRRKAINWTLALTVVLIASMFVGVLIGASGTSVFSTWTVISHHLFGTELGGSDTADAIIWYI
RTPRVLLAAIVGAGLALAGAIMQVLVRNMLADPYILGVNSGASCGAAAALLFGVGAGFGDYALQGSAFLGAMAASGLIFF
VARAAGRISSTRLLMSGVAIGYMLSAATSFLIFSSDSAEGSRSVLFWLLGSLGLAAWNGPMAIIFLIVGIALALLMVLGP
QLDALNSGDETALTLGVSPDRLRILLLVITCLLVGSMVAMAGSIGFIGLVIPHLARRFVSGKHRLMLPVSALMGAILLIW
ADIAARTLLAPQEIPIGIITALIGAPFLLILVRRMHTY

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=334, Percent_Identity=36.2275449101796, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1788004, Length=285, Percent_Identity=38.9473684210526, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1790741, Length=288, Percent_Identity=35.0694444444444, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1786805, Length=291, Percent_Identity=38.4879725085911, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1786804, Length=276, Percent_Identity=37.6811594202899, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1786347, Length=298, Percent_Identity=34.2281879194631, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 37276; Mature: 37276

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSARTHTSFQELGLNASRRKAINWTLALTVVLIASMFVGVLIGASGTSVFSTWTVISH
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
HLFGTELGGSDTADAIIWYIRTPRVLLAAIVGAGLALAGAIMQVLVRNMLADPYILGVNS
HHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
GASCGAAAALLFGVGAGFGDYALQGSAFLGAMAASGLIFFVARAAGRISSTRLLMSGVAI
CCCHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GYMLSAATSFLIFSSDSAEGSRSVLFWLLGSLGLAAWNGPMAIIFLIVGIALALLMVLGP
HHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
QLDALNSGDETALTLGVSPDRLRILLLVITCLLVGSMVAMAGSIGFIGLVIPHLARRFVS
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GKHRLMLPVSALMGAILLIWADIAARTLLAPQEIPIGIITALIGAPFLLILVRRMHTY
CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLSARTHTSFQELGLNASRRKAINWTLALTVVLIASMFVGVLIGASGTSVFSTWTVISH
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
HLFGTELGGSDTADAIIWYIRTPRVLLAAIVGAGLALAGAIMQVLVRNMLADPYILGVNS
HHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
GASCGAAAALLFGVGAGFGDYALQGSAFLGAMAASGLIFFVARAAGRISSTRLLMSGVAI
CCCHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GYMLSAATSFLIFSSDSAEGSRSVLFWLLGSLGLAAWNGPMAIIFLIVGIALALLMVLGP
HHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
QLDALNSGDETALTLGVSPDRLRILLLVITCLLVGSMVAMAGSIGFIGLVIPHLARRFVS
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GKHRLMLPVSALMGAILLIWADIAARTLLAPQEIPIGIITALIGAPFLLILVRRMHTY
CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]