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The map label for this gene is ydiF [H]

Identifier: 62390437

GI number: 62390437

Start: 1642510

End: 1644141

Strand: Reverse

Name: ydiF [H]

Synonym: cg1753

Alternate gene names: 62390437

Gene position: 1644141-1642510 (Counterclockwise)

Preceding gene: 62390438

Following gene: 62390435

Centisome position: 50.08

GC content: 60.29

Gene sequence:

>1632_bases
GTGATTGTCACCAATGATTTAGAGGTGCGCGTTGGCGCACGTACCCTTCTCGATGCCCCAGGTCAGCTCCTTCGGGTGCA
GCCAGGCGACCGTATTGGTCTGGTTGGTAGAAATGGTGCGGGCAAAACCACCACCATGCGAATCCTCTCGGGCGAAACCA
AGCCCTACGGAGGATCCGTAACCACATCTGGTGAAATCGGTTACCTGCCCCAGGACTCCCGCGAAGGCAACATCGAACAA
ACCGCCCGCGACCGAGTCCTCTCCGCCCGTGGTCTTGACCAGCTGCGATCCTCCATGGAACGCCAGCAGGAGATCATGGA
AACCGCGACCGACCCCGGCAAGCTCGACGCCGCGATCCGCAAGTACTCCAGGCTCGAGGAACAATTCCAGTCGCTCGGCG
GCTACGAAGCTGACGCCGAAGCAGCCCAGATCTGCGACAACCTCGGCCTCGAGGCACGCATCCTCGACCAGCAGCTTAAA
ACCCTGTCCGGCGGCCAGCGCCGCCGCGTCGAGTTGGCGCAGATCCTCTTCGCCGCCACCAACGGCTCCGGCAAATCAAA
AACCACATTGCTTCTCGACGAGCCCACCAACCACTTGGACGCAGACTCGATCACCTGGCTCCGTGACTTCCTGGCGAAGC
ACGAAGGTGGACTGATCATGATTTCGCACGACGTCGAACTGCTTGGCGCCGTATGTAACAAGATTTGGTACCTCGACGCA
GTACGCAGCGAAGCCGATGTCTACAACATGGGCTTTAGCAAATACGTCGATGCACGTGCACTCGATGAAGCACGCCGACG
CCGTGAGCGCGCAAACGCCGAAAAGAAGGCCGGAGCCCTCAAGGACCAGGCTGCACGCCTCGGCGCGAAAGCAACCAAGG
CTGCCGCAGCTAAGCAGATGATCGCCCGTGCGGAACGAATGATCGACAACCTCGACGAAATCCGCGTAGCTGACCGCGCC
GCCAACATCGTTTTCCCAGAACCAGCACCCTGTGGAAAAACCCCACTCAACGCCAAGGGCCTGACCAAGATGTACGGCTC
CCTCGAAGTCTTCGCCGGCGTCGACCTAGCCATCGACAAAGGCTCCCGCGTAGTCGTCCTCGGATTCAACGGTGCAGGTA
AAACCACCCTGCTCAAACTCCTCGCCGGTGTGGAACGCACCGACGGCGAAGGCGGCATCGTCACCGGATACGGCCTCAAA
ATCGGCTACTTCGCCCAGGAACACGACACCATCGACCCCGACAAATCCGTCTGGCAAAACACCATCGAAGCCTGCGCCGA
CGCCGACCAACAAAGCCTCCGCAGCCTCCTCGGATCCTTCATGTTCTCCGGCGAACAACTCGACCAACCAGCAGGAACAC
TCTCCGGCGGTGAAAAAACCCGCCTCGCACTGGCCACCCTCGTGTCCTCCCGCGCAAACGTCCTGCTTCTCGACGAGCCC
ACCAACAACCTTGACCCGATCTCCCGCGAACAGGTCCTCGACGCACTGCGCACCTACACCGGCGCAGTCGTCCTGGTTAC
CCACGACCCGGGTGCAGTCAAGGCCCTTGAGCCAGAACGCGTCATCGTGCTTCCTGATGGCACCGAGGATCTTTGGAATG
ATCAGTACATGGAAATCGTGGAATTGGCGTAG

Upstream 100 bases:

>100_bases
TCGTCGGTGCAGTCCTCGGATTGCTTAAGTTGTAGGTGGCTGGGGGCGTCGAAAAGCAGCTTTATTGACCTGGCAACTTC
AATTGATAGACTGTTAGGTT

Downstream 100 bases:

>100_bases
GTTCTAAGGCTGTTTATGCTGGTCAAGACTGTTTCGTTTTAAACTCCTGCACTTAGCCGCCCGCAAGTTGCCCGCATGAA
TTTCATCATGCGGGCTATTT

Product: ABC transporter ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MIVTNDLEVRVGARTLLDAPGQLLRVQPGDRIGLVGRNGAGKTTTMRILSGETKPYGGSVTTSGEIGYLPQDSREGNIEQ
TARDRVLSARGLDQLRSSMERQQEIMETATDPGKLDAAIRKYSRLEEQFQSLGGYEADAEAAQICDNLGLEARILDQQLK
TLSGGQRRRVELAQILFAATNGSGKSKTTLLLDEPTNHLDADSITWLRDFLAKHEGGLIMISHDVELLGAVCNKIWYLDA
VRSEADVYNMGFSKYVDARALDEARRRRERANAEKKAGALKDQAARLGAKATKAAAAKQMIARAERMIDNLDEIRVADRA
ANIVFPEPAPCGKTPLNAKGLTKMYGSLEVFAGVDLAIDKGSRVVVLGFNGAGKTTLLKLLAGVERTDGEGGIVTGYGLK
IGYFAQEHDTIDPDKSVWQNTIEACADADQQSLRSLLGSFMFSGEQLDQPAGTLSGGEKTRLALATLVSSRANVLLLDEP
TNNLDPISREQVLDALRTYTGAVVLVTHDPGAVKALEPERVIVLPDGTEDLWNDQYMEIVELA

Sequences:

>Translated_543_residues
MIVTNDLEVRVGARTLLDAPGQLLRVQPGDRIGLVGRNGAGKTTTMRILSGETKPYGGSVTTSGEIGYLPQDSREGNIEQ
TARDRVLSARGLDQLRSSMERQQEIMETATDPGKLDAAIRKYSRLEEQFQSLGGYEADAEAAQICDNLGLEARILDQQLK
TLSGGQRRRVELAQILFAATNGSGKSKTTLLLDEPTNHLDADSITWLRDFLAKHEGGLIMISHDVELLGAVCNKIWYLDA
VRSEADVYNMGFSKYVDARALDEARRRRERANAEKKAGALKDQAARLGAKATKAAAAKQMIARAERMIDNLDEIRVADRA
ANIVFPEPAPCGKTPLNAKGLTKMYGSLEVFAGVDLAIDKGSRVVVLGFNGAGKTTLLKLLAGVERTDGEGGIVTGYGLK
IGYFAQEHDTIDPDKSVWQNTIEACADADQQSLRSLLGSFMFSGEQLDQPAGTLSGGEKTRLALATLVSSRANVLLLDEP
TNNLDPISREQVLDALRTYTGAVVLVTHDPGAVKALEPERVIVLPDGTEDLWNDQYMEIVELA
>Mature_543_residues
MIVTNDLEVRVGARTLLDAPGQLLRVQPGDRIGLVGRNGAGKTTTMRILSGETKPYGGSVTTSGEIGYLPQDSREGNIEQ
TARDRVLSARGLDQLRSSMERQQEIMETATDPGKLDAAIRKYSRLEEQFQSLGGYEADAEAAQICDNLGLEARILDQQLK
TLSGGQRRRVELAQILFAATNGSGKSKTTLLLDEPTNHLDADSITWLRDFLAKHEGGLIMISHDVELLGAVCNKIWYLDA
VRSEADVYNMGFSKYVDARALDEARRRRERANAEKKAGALKDQAARLGAKATKAAAAKQMIARAERMIDNLDEIRVADRA
ANIVFPEPAPCGKTPLNAKGLTKMYGSLEVFAGVDLAIDKGSRVVVLGFNGAGKTTLLKLLAGVERTDGEGGIVTGYGLK
IGYFAQEHDTIDPDKSVWQNTIEACADADQQSLRSLLGSFMFSGEQLDQPAGTLSGGEKTRLALATLVSSRANVLLLDEP
TNNLDPISREQVLDALRTYTGAVVLVTHDPGAVKALEPERVIVLPDGTEDLWNDQYMEIVELA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=517, Percent_Identity=29.4003868471954, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI10947137, Length=495, Percent_Identity=28.8888888888889, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI27881506, Length=496, Percent_Identity=29.4354838709677, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI10947135, Length=501, Percent_Identity=30.3393213572854, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI69354671, Length=501, Percent_Identity=30.3393213572854, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI116734710, Length=250, Percent_Identity=28, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI31657092, Length=213, Percent_Identity=27.6995305164319, Blast_Score=70, Evalue=7e-12,
Organism=Escherichia coli, GI1789751, Length=519, Percent_Identity=35.0674373795761, Blast_Score=251, Evalue=6e-68,
Organism=Escherichia coli, GI1787041, Length=548, Percent_Identity=33.3941605839416, Blast_Score=248, Evalue=1e-66,
Organism=Escherichia coli, GI2367384, Length=494, Percent_Identity=32.5910931174089, Blast_Score=223, Evalue=3e-59,
Organism=Escherichia coli, GI1787182, Length=504, Percent_Identity=31.1507936507937, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI87081782, Length=562, Percent_Identity=25.6227758007117, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788225, Length=202, Percent_Identity=29.2079207920792, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1787758, Length=202, Percent_Identity=28.2178217821782, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789672, Length=218, Percent_Identity=26.1467889908257, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787164, Length=209, Percent_Identity=33.0143540669856, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787792, Length=210, Percent_Identity=27.1428571428571, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789873, Length=211, Percent_Identity=30.3317535545024, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787105, Length=202, Percent_Identity=29.7029702970297, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI48995001, Length=216, Percent_Identity=28.7037037037037, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1789593, Length=194, Percent_Identity=30.4123711340206, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=495, Percent_Identity=30.5050505050505, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17559834, Length=546, Percent_Identity=27.2893772893773, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17553372, Length=529, Percent_Identity=29.3005671077505, Blast_Score=164, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17565586, Length=237, Percent_Identity=28.2700421940928, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320874, Length=493, Percent_Identity=28.3975659229209, Blast_Score=176, Evalue=9e-45,
Organism=Saccharomyces cerevisiae, GI6321121, Length=535, Percent_Identity=28.5981308411215, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6324314, Length=168, Percent_Identity=34.5238095238095, Blast_Score=84, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6323278, Length=166, Percent_Identity=30.7228915662651, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6325030, Length=174, Percent_Identity=31.6091954022989, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24666836, Length=528, Percent_Identity=31.4393939393939, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24642252, Length=497, Percent_Identity=30.1810865191147, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI18859989, Length=497, Percent_Identity=30.1810865191147, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24641342, Length=499, Percent_Identity=32.4649298597194, Blast_Score=190, Evalue=3e-48,
Organism=Drosophila melanogaster, GI24666092, Length=221, Percent_Identity=30.316742081448, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI221512771, Length=210, Percent_Identity=30, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58867; Mature: 58867

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVTNDLEVRVGARTLLDAPGQLLRVQPGDRIGLVGRNGAGKTTTMRILSGETKPYGGSV
CEECCCCEEEECCHHHHCCCCCEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCE
TTSGEIGYLPQDSREGNIEQTARDRVLSARGLDQLRSSMERQQEIMETATDPGKLDAAIR
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KYSRLEEQFQSLGGYEADAEAAQICDNLGLEARILDQQLKTLSGGQRRRVELAQILFAAT
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
NGSGKSKTTLLLDEPTNHLDADSITWLRDFLAKHEGGLIMISHDVELLGAVCNKIWYLDA
CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
VRSEADVYNMGFSKYVDARALDEARRRRERANAEKKAGALKDQAARLGAKATKAAAAKQM
HHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHCCHHHHHHHHHHH
IARAERMIDNLDEIRVADRAANIVFPEPAPCGKTPLNAKGLTKMYGSLEVFAGVDLAIDK
HHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHHCCCCEEECCEEEECC
GSRVVVLGFNGAGKTTLLKLLAGVERTDGEGGIVTGYGLKIGYFAQEHDTIDPDKSVWQN
CCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCHHHHHH
TIEACADADQQSLRSLLGSFMFSGEQLDQPAGTLSGGEKTRLALATLVSSRANVLLLDEP
HHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECC
TNNLDPISREQVLDALRTYTGAVVLVTHDPGAVKALEPERVIVLPDGTEDLWNDQYMEIV
CCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEECCCEEEEEECCCHHHHCHHHHHHH
ELA
HCC
>Mature Secondary Structure
MIVTNDLEVRVGARTLLDAPGQLLRVQPGDRIGLVGRNGAGKTTTMRILSGETKPYGGSV
CEECCCCEEEECCHHHHCCCCCEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCE
TTSGEIGYLPQDSREGNIEQTARDRVLSARGLDQLRSSMERQQEIMETATDPGKLDAAIR
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KYSRLEEQFQSLGGYEADAEAAQICDNLGLEARILDQQLKTLSGGQRRRVELAQILFAAT
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
NGSGKSKTTLLLDEPTNHLDADSITWLRDFLAKHEGGLIMISHDVELLGAVCNKIWYLDA
CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
VRSEADVYNMGFSKYVDARALDEARRRRERANAEKKAGALKDQAARLGAKATKAAAAKQM
HHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHCCHHHHHHHHHHH
IARAERMIDNLDEIRVADRAANIVFPEPAPCGKTPLNAKGLTKMYGSLEVFAGVDLAIDK
HHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHHCCCCEEECCEEEECC
GSRVVVLGFNGAGKTTLLKLLAGVERTDGEGGIVTGYGLKIGYFAQEHDTIDPDKSVWQN
CCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCHHHHHH
TIEACADADQQSLRSLLGSFMFSGEQLDQPAGTLSGGEKTRLALATLVSSRANVLLLDEP
HHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECC
TNNLDPISREQVLDALRTYTGAVVLVTHDPGAVKALEPERVIVLPDGTEDLWNDQYMEIV
CCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEECCCEEEEEECCCHHHHCHHHHHHH
ELA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]