| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is hemH [H]
Identifier: 62390419
GI number: 62390419
Start: 1623305
End: 1624417
Strand: Reverse
Name: hemH [H]
Synonym: cg1734
Alternate gene names: 62390419
Gene position: 1624417-1623305 (Counterclockwise)
Preceding gene: 62390420
Following gene: 62390417
Centisome position: 49.48
GC content: 55.88
Gene sequence:
>1113_bases ATGAATGAACGCACATCGGATGCATTTGACGCCCTCCTTGTGCTCTCCTTCGGTGGTCCCGAAGGGCACGAGGAGGTTCG TCCGTTTTTGGAGAATGTCACTCACGGAAGGGGGATTCCGCCGGAACGTCTAGATGAAGTGGCGGTTCATTACCACCACT TCGGTGGTATCAGCCCCATCAATGCGCTGAACAGGGAAATTATCGCCAATGTGGAAAAAGAATTGGCGTCTCGCGATCAC AAGCTGCCTGTTTATTTTGGTAACCGCAACTGGAAGCCGTTTGATAATGAGGCCGCTGAACAAATGGCTGATGACGGCGT GAAAAACGCGCTGGTGTTGGCAACTTCCGCTTGGGGTGGCTACTCCGGTTGTCGGCAGTACCAGGAAGATATTCAGGGCA TGATCAAGCACCTGGAGTCTCAGGGGCAGTCGATCACGTTCACCAAGCTGCGTCAGTTCTACGATCACCCTCGTTTTGTC TCCACCATGGCTCAATTGGTTCAGGATTCCTACGCGAAGCTTCCCGATGAGCTGCGAGATGAGGCGCGTCTGGTCTTCAC CGCGCACTCCATTCCACTGACTGCGGACAATGCTGCGGGAACCCCTGAGGATGGCTCCTTGTATTCCACACAGGTCAAGG AAGCGTCAGCACTGATTGCTGAGGCTGTTGGTGTGTCAGATTTTGATGTGGTGTGGCAGTCCCGCTCGGGTAGCCCGCAC ACTCCGTGGCTGGAGCCTGACATCGTGGATCACGCAGTGGAGCTCAACGAGAAGGGTCAAAAAGCGCTCGTTGTCTGCCC TGTAGGCTTTATTTCTGATCATATGGAAGTCATTTGGGATCTTGATTCCGAGCTGATGGAAGAAGCCGAGAAGCGCAACA TGGTGGTCGAGCGTGTCGCTACCGTTGGCCCCACCGATGAATTCGCAGCCCTTGTGGTTGATCTCATCGAGGAGGCAGAG CTCAAGCGCGTTATCGAGCGCCTTGGAAAGCTGCCAGCACGCGGAAGTTCCGTCAACGGCGCACCGTGTGGCGACGGCTG CTGTGGTACCGCCAAGCATAAAACCGCGCGGGTGAACCCCAACGCTCGCTCAGCGGCGCCAGCTGCCAACTAG
Upstream 100 bases:
>100_bases ACCGAGAGCGTGGTACGCCTCATTTAGTTTCCTCCTATGAATCTTGATGTGGTTCATGCGTTTTTATGCAATATCAACCA AAAGTTGGTACGATCCTCAT
Downstream 100 bases:
>100_bases GAGTGATAGTCCCTCGCAAACTCTGCGAGGGCATAACTCACCCCAGCCATGCGCGCGGTCCGAATATGGCTCCACAGGAA AATCAACTGTGGATCCAGGC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MNERTSDAFDALLVLSFGGPEGHEEVRPFLENVTHGRGIPPERLDEVAVHYHHFGGISPINALNREIIANVEKELASRDH KLPVYFGNRNWKPFDNEAAEQMADDGVKNALVLATSAWGGYSGCRQYQEDIQGMIKHLESQGQSITFTKLRQFYDHPRFV STMAQLVQDSYAKLPDELRDEARLVFTAHSIPLTADNAAGTPEDGSLYSTQVKEASALIAEAVGVSDFDVVWQSRSGSPH TPWLEPDIVDHAVELNEKGQKALVVCPVGFISDHMEVIWDLDSELMEEAEKRNMVVERVATVGPTDEFAALVVDLIEEAE LKRVIERLGKLPARGSSVNGAPCGDGCCGTAKHKTARVNPNARSAAPAAN
Sequences:
>Translated_370_residues MNERTSDAFDALLVLSFGGPEGHEEVRPFLENVTHGRGIPPERLDEVAVHYHHFGGISPINALNREIIANVEKELASRDH KLPVYFGNRNWKPFDNEAAEQMADDGVKNALVLATSAWGGYSGCRQYQEDIQGMIKHLESQGQSITFTKLRQFYDHPRFV STMAQLVQDSYAKLPDELRDEARLVFTAHSIPLTADNAAGTPEDGSLYSTQVKEASALIAEAVGVSDFDVVWQSRSGSPH TPWLEPDIVDHAVELNEKGQKALVVCPVGFISDHMEVIWDLDSELMEEAEKRNMVVERVATVGPTDEFAALVVDLIEEAE LKRVIERLGKLPARGSSVNGAPCGDGCCGTAKHKTARVNPNARSAAPAAN >Mature_370_residues MNERTSDAFDALLVLSFGGPEGHEEVRPFLENVTHGRGIPPERLDEVAVHYHHFGGISPINALNREIIANVEKELASRDH KLPVYFGNRNWKPFDNEAAEQMADDGVKNALVLATSAWGGYSGCRQYQEDIQGMIKHLESQGQSITFTKLRQFYDHPRFV STMAQLVQDSYAKLPDELRDEARLVFTAHSIPLTADNAAGTPEDGSLYSTQVKEASALIAEAVGVSDFDVVWQSRSGSPH TPWLEPDIVDHAVELNEKGQKALVVCPVGFISDHMEVIWDLDSELMEEAEKRNMVVERVATVGPTDEFAALVVDLIEEAE LKRVIERLGKLPARGSSVNGAPCGDGCCGTAKHKTARVNPNARSAAPAAN
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=286, Percent_Identity=24.8251748251748, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI60499025, Length=286, Percent_Identity=24.8251748251748, Blast_Score=94, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324750, Length=327, Percent_Identity=24.7706422018349, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI17864156, Length=319, Percent_Identity=26.0188087774295, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI45552018, Length=163, Percent_Identity=28.2208588957055, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24651774, Length=259, Percent_Identity=25.8687258687259, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 40580; Mature: 40580
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERTSDAFDALLVLSFGGPEGHEEVRPFLENVTHGRGIPPERLDEVAVHYHHFGGISPI CCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHH NALNREIIANVEKELASRDHKLPVYFGNRNWKPFDNEAAEQMADDGVKNALVLATSAWGG HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCC YSGCRQYQEDIQGMIKHLESQGQSITFTKLRQFYDHPRFVSTMAQLVQDSYAKLPDELRD HHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHC EARLVFTAHSIPLTADNAAGTPEDGSLYSTQVKEASALIAEAVGVSDFDVVWQSRSGSPH CCEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCC TPWLEPDIVDHAVELNEKGQKALVVCPVGFISDHMEVIWDLDSELMEEAEKRNMVVERVA CCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TVGPTDEFAALVVDLIEEAELKRVIERLGKLPARGSSVNGAPCGDGCCGTAKHKTARVNP HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC NARSAAPAAN CCCCCCCCCC >Mature Secondary Structure MNERTSDAFDALLVLSFGGPEGHEEVRPFLENVTHGRGIPPERLDEVAVHYHHFGGISPI CCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHH NALNREIIANVEKELASRDHKLPVYFGNRNWKPFDNEAAEQMADDGVKNALVLATSAWGG HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCC YSGCRQYQEDIQGMIKHLESQGQSITFTKLRQFYDHPRFVSTMAQLVQDSYAKLPDELRD HHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHC EARLVFTAHSIPLTADNAAGTPEDGSLYSTQVKEASALIAEAVGVSDFDVVWQSRSGSPH CCEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCC TPWLEPDIVDHAVELNEKGQKALVVCPVGFISDHMEVIWDLDSELMEEAEKRNMVVERVA CCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TVGPTDEFAALVVDLIEEAELKRVIERLGKLPARGSSVNGAPCGDGCCGTAKHKTARVNP HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC NARSAAPAAN CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA