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The map label for this gene is ybhB [C]

Identifier: 62390406

GI number: 62390406

Start: 1606745

End: 1607278

Strand: Reverse

Name: ybhB [C]

Synonym: cg1718

Alternate gene names: 62390406

Gene position: 1607278-1606745 (Counterclockwise)

Preceding gene: 62390407

Following gene: 62390405

Centisome position: 48.96

GC content: 57.68

Gene sequence:

>534_bases
ATGAGCACCTACCAAGACGATCGTTTCCCAGGCCCAGACCCCTACGCACCGCTTGGTGAAAAGCCAAGCTTTACCCTCAC
CTCCACCGACTTGGAAAACGGTGCAAAGCTGGCCGAAGCCCAACTCGGTGGCACCGATATTTCCCCACAGCTGTCCTGGT
CAGATCTTCCAGAAGGCACCAAATCCCTCGCGATCACCTGCCTCGACCCAGATGCCCCAACCGGCGCTGGTTTCTGGCAC
TGGGCAGTGTTTAACATCCCCACAACTGTCACGGAGATCCCCACCGGTGCTGGCGATGAAACCCTCGGCGGCATCGAAGG
CGTAGTTTCCCTCAAGGGTGATTCCGGCAAGCGTGGCTTCTACGGAGCGCAACCTCCAGCTGGCCACGCACCGCACCGTT
ACCTCTTCGCAGTTCATGCACTTGATGTGGAAAAACTCGACATCGCCCCCGACGCTACCCCCACTGTTCTAGGCTTCAAC
CTGTATTTCCACACTCTTGGCAGGTCAATTGTGTGGGGATGGTACGAGAACTAG

Upstream 100 bases:

>100_bases
CTTGCTTTTGAGGGCCGCTACGCGCAGCTGTATCAACGATGGAGTGCTCAATAGTTCAAATCCACCACAAACTCTAGAGA
TTTGGGGTAGAAACGAAGAC

Downstream 100 bases:

>100_bases
TAGGGTATGTCACATTATGAGTTCAGCATCGGGAAGATCATTAAAAAAGCTCACCAGCCTCGAAGGCCGTGCCAGCTGGC
GTAAAGTTCCGGCAGCAATC

Product: phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSTYQDDRFPGPDPYAPLGEKPSFTLTSTDLENGAKLAEAQLGGTDISPQLSWSDLPEGTKSLAITCLDPDAPTGAGFWH
WAVFNIPTTVTEIPTGAGDETLGGIEGVVSLKGDSGKRGFYGAQPPAGHAPHRYLFAVHALDVEKLDIAPDATPTVLGFN
LYFHTLGRSIVWGWYEN

Sequences:

>Translated_177_residues
MSTYQDDRFPGPDPYAPLGEKPSFTLTSTDLENGAKLAEAQLGGTDISPQLSWSDLPEGTKSLAITCLDPDAPTGAGFWH
WAVFNIPTTVTEIPTGAGDETLGGIEGVVSLKGDSGKRGFYGAQPPAGHAPHRYLFAVHALDVEKLDIAPDATPTVLGFN
LYFHTLGRSIVWGWYEN
>Mature_176_residues
STYQDDRFPGPDPYAPLGEKPSFTLTSTDLENGAKLAEAQLGGTDISPQLSWSDLPEGTKSLAITCLDPDAPTGAGFWHW
AVFNIPTTVTEIPTGAGDETLGGIEGVVSLKGDSGKRGFYGAQPPAGHAPHRYLFAVHALDVEKLDIAPDATPTVLGFNL
YFHTLGRSIVWGWYEN

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=154, Percent_Identity=43.5064935064935, Blast_Score=139, Evalue=8e-35,
Organism=Escherichia coli, GI1786757, Length=164, Percent_Identity=39.0243902439024, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18933; Mature: 18802

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTYQDDRFPGPDPYAPLGEKPSFTLTSTDLENGAKLAEAQLGGTDISPQLSWSDLPEGT
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
KSLAITCLDPDAPTGAGFWHWAVFNIPTTVTEIPTGAGDETLGGIEGVVSLKGDSGKRGF
CEEEEEEECCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCC
YGAQPPAGHAPHRYLFAVHALDVEKLDIAPDATPTVLGFNLYFHTLGRSIVWGWYEN
CCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCEEEEHHHHHHHHCCEEEEEEECC
>Mature Secondary Structure 
STYQDDRFPGPDPYAPLGEKPSFTLTSTDLENGAKLAEAQLGGTDISPQLSWSDLPEGT
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
KSLAITCLDPDAPTGAGFWHWAVFNIPTTVTEIPTGAGDETLGGIEGVVSLKGDSGKRGF
CEEEEEEECCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCC
YGAQPPAGHAPHRYLFAVHALDVEKLDIAPDATPTVLGFNLYFHTLGRSIVWGWYEN
CCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCEEEEHHHHHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]