| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is yrpG [H]
Identifier: 62390399
GI number: 62390399
Start: 1600146
End: 1601084
Strand: Direct
Name: yrpG [H]
Synonym: cg1711
Alternate gene names: 62390399
Gene position: 1600146-1601084 (Clockwise)
Preceding gene: 62390395
Following gene: 62390400
Centisome position: 48.74
GC content: 57.51
Gene sequence:
>939_bases ATGGTCGGTTCAAGTGGTTTGCGGGTATCCAGGCTCGGTTTGGGCACCTCAACATGGGGCTCGGGCACCGAGCTGGCTGA GGCAGGCGATATCTTTAAGGCGTTCATCAATTCTGGTGGCACGCTTATCGACGTCTCCCCCAACTACACCACCGGCGTCG CGGAAGAAATGCTCGGCACGATGTTGGATGCGGAAGTCTCTCGTTCGGCTGTCGTCATTTCCTCCAGCGCAGGTGTCAAC CCCGCTCTGCCGCTCGGCCGACGTGTGGATTGCTCCCGCCGCAATTTGATTGCCCAATTAGATGTCACCCTGCGGGCATT AAACACTGACTATTTGGATTTGTGGTCTGTGGGCTATTGGGATGAGGGCACCCCACCGCATGAGGTGGCCGATACTTTGG ATTACGCCGTGCGCACCGGCCGAGTCCGATATGCCGGTGTCCGAGGATATTCCGGTTGGCAGTTAGCGGTCACCCACGCT GCATCCAATCATGCAGCGGCCTCCGCCCGCCCCGTGGTCGTTGCACAAAATGAATACAGCCTGCTGGAACGCCGCGCAGA ACAAGAACTCCTCCCTGCCACCCAACACCTAGGTGTCGGATTCTTTGCTGGCGCTCCGCTGGGGCAAGGCGTGCTGACTG CTAAATACCGCTCCGAAATTCCCCATGATTCCAGAGCTGCATCCACAGGACGCGACGCAGAAGTCCAAAGCTACCTAGAT AATCGAGGCCGCATCATTGTCGATGCTCTTGATACTGCAGCCAAAGGATTAGGCATTAGCCCCGCTGTCACAGCCACCAC CTGGGTGCGTGATCGTCCCGGAGTGACAGCTGTCATCGTGGGCGCTCGCACACATGAACAGCTGTCACATCTTCTCAAGG CGGAATCGGTGACTTTGCCAACACCAATCACACAAGCCCTTGATGATGTCTCCCTGTGA
Upstream 100 bases:
>100_bases GGCAGGATCTGCTGCTGCGGCTAGGAGGGTTATCTCTTCATTCACCCGATCTACCGTACTACCTTATGACCTCAGTAGTG TGGTGGGCGTGAAACAGCGA
Downstream 100 bases:
>100_bases CTTGGTCCAATTACATTCACTGGTAATCTGAAACCTTGTGAATATGCGCCGTCGATCCCGTGTGTCCCGTTTGCTTCCCG CCACAGCTTTGCTGGCCTCA
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MVGSSGLRVSRLGLGTSTWGSGTELAEAGDIFKAFINSGGTLIDVSPNYTTGVAEEMLGTMLDAEVSRSAVVISSSAGVN PALPLGRRVDCSRRNLIAQLDVTLRALNTDYLDLWSVGYWDEGTPPHEVADTLDYAVRTGRVRYAGVRGYSGWQLAVTHA ASNHAAASARPVVVAQNEYSLLERRAEQELLPATQHLGVGFFAGAPLGQGVLTAKYRSEIPHDSRAASTGRDAEVQSYLD NRGRIIVDALDTAAKGLGISPAVTATTWVRDRPGVTAVIVGARTHEQLSHLLKAESVTLPTPITQALDDVSL
Sequences:
>Translated_312_residues MVGSSGLRVSRLGLGTSTWGSGTELAEAGDIFKAFINSGGTLIDVSPNYTTGVAEEMLGTMLDAEVSRSAVVISSSAGVN PALPLGRRVDCSRRNLIAQLDVTLRALNTDYLDLWSVGYWDEGTPPHEVADTLDYAVRTGRVRYAGVRGYSGWQLAVTHA ASNHAAASARPVVVAQNEYSLLERRAEQELLPATQHLGVGFFAGAPLGQGVLTAKYRSEIPHDSRAASTGRDAEVQSYLD NRGRIIVDALDTAAKGLGISPAVTATTWVRDRPGVTAVIVGARTHEQLSHLLKAESVTLPTPITQALDDVSL >Mature_312_residues MVGSSGLRVSRLGLGTSTWGSGTELAEAGDIFKAFINSGGTLIDVSPNYTTGVAEEMLGTMLDAEVSRSAVVISSSAGVN PALPLGRRVDCSRRNLIAQLDVTLRALNTDYLDLWSVGYWDEGTPPHEVADTLDYAVRTGRVRYAGVRGYSGWQLAVTHA ASNHAAASARPVVVAQNEYSLLERRAEQELLPATQHLGVGFFAGAPLGQGVLTAKYRSEIPHDSRAASTGRDAEVQSYLD NRGRIIVDALDTAAKGLGISPAVTATTWVRDRPGVTAVIVGARTHEQLSHLLKAESVTLPTPITQALDDVSL
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=319, Percent_Identity=28.8401253918495, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI27436962, Length=319, Percent_Identity=28.8401253918495, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI27436966, Length=319, Percent_Identity=28.8401253918495, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI27436971, Length=311, Percent_Identity=31.1897106109325, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI4504825, Length=317, Percent_Identity=28.7066246056782, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI27436969, Length=317, Percent_Identity=28.7066246056782, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI223718702, Length=209, Percent_Identity=29.6650717703349, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI41152114, Length=298, Percent_Identity=25.8389261744966, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI41327764, Length=209, Percent_Identity=29.1866028708134, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI87081735, Length=308, Percent_Identity=30.1948051948052, Blast_Score=118, Evalue=5e-28, Organism=Escherichia coli, GI1789375, Length=318, Percent_Identity=32.0754716981132, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI1789199, Length=317, Percent_Identity=32.1766561514196, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1788070, Length=330, Percent_Identity=24.5454545454545, Blast_Score=66, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323998, Length=323, Percent_Identity=25.077399380805, Blast_Score=90, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6319958, Length=293, Percent_Identity=24.9146757679181, Blast_Score=85, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6325169, Length=336, Percent_Identity=23.2142857142857, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319951, Length=333, Percent_Identity=24.9249249249249, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322615, Length=227, Percent_Identity=26.431718061674, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640980, Length=316, Percent_Identity=27.2151898734177, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI45549126, Length=316, Percent_Identity=27.2151898734177, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 33062; Mature: 33062
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGSSGLRVSRLGLGTSTWGSGTELAEAGDIFKAFINSGGTLIDVSPNYTTGVAEEMLGT CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH MLDAEVSRSAVVISSSAGVNPALPLGRRVDCSRRNLIAQLDVTLRALNTDYLDLWSVGYW HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHCEEEHHEEEEEECCCCCCHHEECCCC DEGTPPHEVADTLDYAVRTGRVRYAGVRGYSGWQLAVTHAASNHAAASARPVVVAQNEYS CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEECCHHH LLERRAEQELLPATQHLGVGFFAGAPLGQGVLTAKYRSEIPHDSRAASTGRDAEVQSYLD HHHHHHHHHHCCHHHHCCCEEECCCCCCCCEEEEHHHHCCCCCCHHCCCCCCHHHHHHHC NRGRIIVDALDTAAKGLGISPAVTATTWVRDRPGVTAVIVGARTHEQLSHLLKAESVTLP CCCCEEEEEHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCC TPITQALDDVSL CHHHHHHHHCCC >Mature Secondary Structure MVGSSGLRVSRLGLGTSTWGSGTELAEAGDIFKAFINSGGTLIDVSPNYTTGVAEEMLGT CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH MLDAEVSRSAVVISSSAGVNPALPLGRRVDCSRRNLIAQLDVTLRALNTDYLDLWSVGYW HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHCEEEHHEEEEEECCCCCCHHEECCCC DEGTPPHEVADTLDYAVRTGRVRYAGVRGYSGWQLAVTHAASNHAAASARPVVVAQNEYS CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEECCHHH LLERRAEQELLPATQHLGVGFFAGAPLGQGVLTAKYRSEIPHDSRAASTGRDAEVQSYLD HHHHHHHHHHCCHHHHCCCEEECCCCCCCCEEEEHHHHCCCCCCHHCCCCCCHHHHHHHC NRGRIIVDALDTAAKGLGISPAVTATTWVRDRPGVTAVIVGARTHEQLSHLLKAESVTLP CCCCEEEEEHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCC TPITQALDDVSL CHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377 [H]