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The map label for this gene is ybhS [C]

Identifier: 62390339

GI number: 62390339

Start: 1535248

End: 1535991

Strand: Direct

Name: ybhS [C]

Synonym: cg1647

Alternate gene names: 62390339

Gene position: 1535248-1535991 (Clockwise)

Preceding gene: 62390338

Following gene: 62390349

Centisome position: 46.77

GC content: 54.7

Gene sequence:

>744_bases
ATGAACCCTCACTATCTGCTTGCCACGGTCAAACGAGTCCTGCTGCAGCTGAAAGCCGATAAACGTTCCATCGCGCTGAT
TCTTCTAGCACCCGTGGCGTTGATGTCGCTGTTTTATTACATGTATTCCTCCACACCGGCAGGCACCCAGCTGTTTAAGA
CCATTTCCACGGTCATGATCGCAGTGTTCCCCTTGATGCTCATGTTTTTGATGACGTCGGTGACGATGCAAAGAGAACGC
AACGCTGGAACGCTCGAGCGCTTGTGGACCACGAACATTCACCGCGTTGATTTGATCGGTGGCTACGGGGTGGCCTTCGG
CATCATGGCGGTGGCGCAATCTTTGCTCATGGTGCTCACCCTTCGGTATCTCCTGGGTGTGGAAACCGAATCGGAGTGGT
GGATTTCTACGCTCATTGCTGCGATCACCGGTCTTATCGGAGTGTCTCTTGGCCTGTTGAGCTCTGCGTTTGCCAGCACT
GAGTTCCAAGCTATCCAAACGCTGCCGTTGCTTATTTTGCCCCAGTTCCTATTGTGCGGTTTGCTGATCCCACGGGATGA
TCTGCCGGATGTGTTGCGCTGGGTTTCTAATGTGTTGCCGCTGTCCTATGCAGTTGATGCAGCGCTTGAGGCCTCACGGA
CGGGAATCGGACAGCAAGTAGTGGTCAACATTGCCATCTGCGCCGCGTTTGCCGTGAGCTTCCTGCTGGTGGCGGCGCTA
TCGATGCCGAGAATGACCCGCTAG

Upstream 100 bases:

>100_bases
GTCGGATCATCTGGAGGGGAACACCCACACGCCTTCTAGAAGATACAGGCAAAAGCTCATACGAAGATGCTTTCTTGGCT
GCCATTGACGGGGTAAGGTC

Downstream 100 bases:

>100_bases
ATTACTCTTCCAGCGAGGTGCCAATCATCGACATCGATGTGGCCCTCGCCTGAGCGGCTGCCTGGCCACGGTGAGTGATG
AGCAGCTCGATTAATTGCTC

Product: ABC-type multidrug transport system, permease component

Products: NA

Alternate protein names: Multidrug ABC Transporter Inner Membrane Protein; ABC Transporter Permease; ABC Transporter Permease Protein; ABC Transporter Efflux Protein DrrB Family Protein; DrrB Family ABC Transporter; ABC Transporter Permease Component; Abc-2 Type Transporter Integral Membrane Subunit; DrrB Family ABC Transporter Efflux Protein; ABC Drug Efflux Pump Inner Membrane Subunit DrrB Family; ABC Transporter ; ABC Transporter; Multidrug ABC Transporter Permease; ABC Transporter ATPase And Permease Components; Drug Efflux ABC Transporter Inner Membrane Protein; Multidrug Resistance ABC Transporter Permease; Antibiotic Resistance ABC Transporter Efflux Protein; ABC Transporter Subunit

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MNPHYLLATVKRVLLQLKADKRSIALILLAPVALMSLFYYMYSSTPAGTQLFKTISTVMIAVFPLMLMFLMTSVTMQRER
NAGTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLTLRYLLGVETESEWWISTLIAAITGLIGVSLGLLSSAFAST
EFQAIQTLPLLILPQFLLCGLLIPRDDLPDVLRWVSNVLPLSYAVDAALEASRTGIGQQVVVNIAICAAFAVSFLLVAAL
SMPRMTR

Sequences:

>Translated_247_residues
MNPHYLLATVKRVLLQLKADKRSIALILLAPVALMSLFYYMYSSTPAGTQLFKTISTVMIAVFPLMLMFLMTSVTMQRER
NAGTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLTLRYLLGVETESEWWISTLIAAITGLIGVSLGLLSSAFAST
EFQAIQTLPLLILPQFLLCGLLIPRDDLPDVLRWVSNVLPLSYAVDAALEASRTGIGQQVVVNIAICAAFAVSFLLVAAL
SMPRMTR
>Mature_247_residues
MNPHYLLATVKRVLLQLKADKRSIALILLAPVALMSLFYYMYSSTPAGTQLFKTISTVMIAVFPLMLMFLMTSVTMQRER
NAGTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLTLRYLLGVETESEWWISTLIAAITGLIGVSLGLLSSAFAST
EFQAIQTLPLLILPQFLLCGLLIPRDDLPDVLRWVSNVLPLSYAVDAALEASRTGIGQQVVVNIAICAAFAVSFLLVAAL
SMPRMTR

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27070; Mature: 27070

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPHYLLATVKRVLLQLKADKRSIALILLAPVALMSLFYYMYSSTPAGTQLFKTISTVMI
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AVFPLMLMFLMTSVTMQRERNAGTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLT
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
LRYLLGVETESEWWISTLIAAITGLIGVSLGLLSSAFASTEFQAIQTLPLLILPQFLLCG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIPRDDLPDVLRWVSNVLPLSYAVDAALEASRTGIGQQVVVNIAICAAFAVSFLLVAAL
HCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SMPRMTR
CCCCCCC
>Mature Secondary Structure
MNPHYLLATVKRVLLQLKADKRSIALILLAPVALMSLFYYMYSSTPAGTQLFKTISTVMI
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AVFPLMLMFLMTSVTMQRERNAGTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLT
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
LRYLLGVETESEWWISTLIAAITGLIGVSLGLLSSAFASTEFQAIQTLPLLILPQFLLCG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIPRDDLPDVLRWVSNVLPLSYAVDAALEASRTGIGQQVVVNIAICAAFAVSFLLVAAL
HCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SMPRMTR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA