| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62390169
Identifier: 62390169
GI number: 62390169
Start: 1349927
End: 1351546
Strand: Direct
Name: 62390169
Synonym: cg1449
Alternate gene names: NA
Gene position: 1349927-1351546 (Clockwise)
Preceding gene: 62390168
Following gene: 62390170
Centisome position: 41.12
GC content: 56.3
Gene sequence:
>1620_bases ATGGCGGAGGGCGCGTCGACAAGCGAAGTTGTCGACGATTCGCCCTACCGCGAAGCGCGCGCTGAAAACGTGGCGCGTGT GGTGTCGGAGGATTTTCCGAGTACCCCGACGGTGATCAGTGACGCCGACTACTCCGGAATCAAGGCTAGCGAGTTGTTTT TTGATTCCTCTGACAATGTTGTTGTCGCTGGCAATGGTATTGCAGAGGAGCTGCGCGCGGCCTCGATCGGTGTGGTTGCG CATGCGCCGGTTCTGCATGCGCGCGGTGATAATAACGCCGCAGTCATGGCGGAAATTGAGCGTCTCGGCGCTTCAACGGT GTTGTTGATTGGCGATGCGCTGCCAGAACTTGCCGAGGATGAGACGATCACCAAAGTCATTCATGACGACGGTACCGAAG AAGGATTAGCGCAGCTCACCGCTTTGCAATTTGAGACGAAACAGGTTGACACGGTGGAGGATCTGGTTCGGGAAACCGCC AGCCTCACCCCTGAGGATCAAACACTGCTCGCACCTGCATGGGGTGGTGTGGCGCCGACGCCTTCCGACGACAAGCTGGC TGCCTTCCCGCTGCAGTCCAAACGTGACGGTGAAATGTCGCCGATCGTGATTGCCAGCCCAGAATCTGGAATCTCCGCTG TGGCGACTGCGCGTGCATTCGGCGCAGAAATTCGATTCATGGATTATCCCGACCCGCGATTCAACCAAGAGCAGATGAAG ATGGTTGCCGGCCTGGCTGATCGTCCTTTGCTTGCACTCGGTGATCAATTTGGGACCGGCGAACAGCTCGCGGAAAAGAT CAAGCGTGGGGAAGAAGTAACCACTGAACTACCCGGCGGTGGAGGACTTGTTTTCCCAGGTCGACGCATGGTGGCACTGT ACGGACACCCATCCGGACCAGCTTTAGGCGCACTTGGTGAACAACCAGCCGCCGAAGCCGTGGCGCGCGCGACCGACATG GCTGCGCAGTACCAAGAGTTCGAAGACCAGCCCGTGATTCCGGCATTCGAAGTAATCGCAACGGTTGCCTCTGAATTCGC AGGCGACGACGGCAACTACTCCAACGAATTCCCCGTGGAAGATCTAGTCGGATACGTTGACGCCATCACCGAAGCCGGCG GATACGCAGTCCTGGATCTTCAACCCGGACGCGCCAACTTCCTCGACCAAGCCAAAATGTATGAAGAACTCCTCAAACGA CCAAACGTTGGATTGGCGCTAGATCCCGAGTGGAAAATCGGACCCGATGAGCAACCCATGACACGAGTGGGCTCTGCAGA TGCCGCCGAAATCAACGAAGTATCCCAGTGGCTCGCCGACCTGACCGCCGAGAACGATCTTCCACAAAAGGCATTTGTAC TGCACCAATTCCAATTGGAAATGCTCACCAATCGGGATCAAATCAATACCGATCACCTGGAACTGGCTGTCGTGTTGCAC GCAGATGGACACGGAAACGCAGGGGATAAGTACGCAACTTGGAACATGCTTCGCGAGGGACTGAGCCCGAACTACTTCAT GGCGTGGAAAAACTTCTACGACGAGGATTTCCCGACCTTCACTCCGCAACAAACCTATGAAGAGGTCGATCCGCGACCAT GGTTTGTGTCGTATCAGTAG
Upstream 100 bases:
>100_bases TCGCATTATTGCAGCAACCACCACAGCAGTGGTGGCGCTAGGCCTGGTTTCCTGTTCAACGGACAGCAGCCAGGAAGGCG CCAACGGTGCTGCGGAGGTG
Downstream 100 bases:
>100_bases TTTCGGGGAGCTTCGGGCTCGCTTGTTGGCAATGTGAGCGGTGAGTTAGCTTTCGACCAAACCACACTGCCCACGAATCC TAGAAATGGGATCCGTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: SH3 Type 3 Domain Protein; LigA Protein; Secreted Protein
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MAEGASTSEVVDDSPYREARAENVARVVSEDFPSTPTVISDADYSGIKASELFFDSSDNVVVAGNGIAEELRAASIGVVA HAPVLHARGDNNAAVMAEIERLGASTVLLIGDALPELAEDETITKVIHDDGTEEGLAQLTALQFETKQVDTVEDLVRETA SLTPEDQTLLAPAWGGVAPTPSDDKLAAFPLQSKRDGEMSPIVIASPESGISAVATARAFGAEIRFMDYPDPRFNQEQMK MVAGLADRPLLALGDQFGTGEQLAEKIKRGEEVTTELPGGGGLVFPGRRMVALYGHPSGPALGALGEQPAAEAVARATDM AAQYQEFEDQPVIPAFEVIATVASEFAGDDGNYSNEFPVEDLVGYVDAITEAGGYAVLDLQPGRANFLDQAKMYEELLKR PNVGLALDPEWKIGPDEQPMTRVGSADAAEINEVSQWLADLTAENDLPQKAFVLHQFQLEMLTNRDQINTDHLELAVVLH ADGHGNAGDKYATWNMLREGLSPNYFMAWKNFYDEDFPTFTPQQTYEEVDPRPWFVSYQ
Sequences:
>Translated_539_residues MAEGASTSEVVDDSPYREARAENVARVVSEDFPSTPTVISDADYSGIKASELFFDSSDNVVVAGNGIAEELRAASIGVVA HAPVLHARGDNNAAVMAEIERLGASTVLLIGDALPELAEDETITKVIHDDGTEEGLAQLTALQFETKQVDTVEDLVRETA SLTPEDQTLLAPAWGGVAPTPSDDKLAAFPLQSKRDGEMSPIVIASPESGISAVATARAFGAEIRFMDYPDPRFNQEQMK MVAGLADRPLLALGDQFGTGEQLAEKIKRGEEVTTELPGGGGLVFPGRRMVALYGHPSGPALGALGEQPAAEAVARATDM AAQYQEFEDQPVIPAFEVIATVASEFAGDDGNYSNEFPVEDLVGYVDAITEAGGYAVLDLQPGRANFLDQAKMYEELLKR PNVGLALDPEWKIGPDEQPMTRVGSADAAEINEVSQWLADLTAENDLPQKAFVLHQFQLEMLTNRDQINTDHLELAVVLH ADGHGNAGDKYATWNMLREGLSPNYFMAWKNFYDEDFPTFTPQQTYEEVDPRPWFVSYQ >Mature_538_residues AEGASTSEVVDDSPYREARAENVARVVSEDFPSTPTVISDADYSGIKASELFFDSSDNVVVAGNGIAEELRAASIGVVAH APVLHARGDNNAAVMAEIERLGASTVLLIGDALPELAEDETITKVIHDDGTEEGLAQLTALQFETKQVDTVEDLVRETAS LTPEDQTLLAPAWGGVAPTPSDDKLAAFPLQSKRDGEMSPIVIASPESGISAVATARAFGAEIRFMDYPDPRFNQEQMKM VAGLADRPLLALGDQFGTGEQLAEKIKRGEEVTTELPGGGGLVFPGRRMVALYGHPSGPALGALGEQPAAEAVARATDMA AQYQEFEDQPVIPAFEVIATVASEFAGDDGNYSNEFPVEDLVGYVDAITEAGGYAVLDLQPGRANFLDQAKMYEELLKRP NVGLALDPEWKIGPDEQPMTRVGSADAAEINEVSQWLADLTAENDLPQKAFVLHQFQLEMLTNRDQINTDHLELAVVLHA DGHGNAGDKYATWNMLREGLSPNYFMAWKNFYDEDFPTFTPQQTYEEVDPRPWFVSYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58328; Mature: 58197
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGASTSEVVDDSPYREARAENVARVVSEDFPSTPTVISDADYSGIKASELFFDSSDNV CCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHEEECCCCCE VVAGNGIAEELRAASIGVVAHAPVLHARGDNNAAVMAEIERLGASTVLLIGDALPELAED EEECCCHHHHHHHHHCCEEECCCEEEECCCCCCHHHHHHHHCCCCEEEEEEHHCHHHHCC ETITKVIHDDGTEEGLAQLTALQFETKQVDTVEDLVRETASLTPEDQTLLAPAWGGVAPT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC PSDDKLAAFPLQSKRDGEMSPIVIASPESGISAVATARAFGAEIRFMDYPDPRFNQEQMK CCCCCEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHH MVAGLADRPLLALGDQFGTGEQLAEKIKRGEEVTTELPGGGGLVFPGRRMVALYGHPSGP HHHCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCEECCCCEEEEEEECCCCC ALGALGEQPAAEAVARATDMAAQYQEFEDQPVIPAFEVIATVASEFAGDDGNYSNEFPVE CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH DLVGYVDAITEAGGYAVLDLQPGRANFLDQAKMYEELLKRPNVGLALDPEWKIGPDEQPM HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHH TRVGSADAAEINEVSQWLADLTAENDLPQKAFVLHQFQLEMLTNRDQINTDHLELAVVLH HHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE ADGHGNAGDKYATWNMLREGLSPNYFMAWKNFYDEDFPTFTPQQTYEEVDPRPWFVSYQ ECCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCHHHHHHCCCCCEEEECC >Mature Secondary Structure AEGASTSEVVDDSPYREARAENVARVVSEDFPSTPTVISDADYSGIKASELFFDSSDNV CCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHEEECCCCCE VVAGNGIAEELRAASIGVVAHAPVLHARGDNNAAVMAEIERLGASTVLLIGDALPELAED EEECCCHHHHHHHHHCCEEECCCEEEECCCCCCHHHHHHHHCCCCEEEEEEHHCHHHHCC ETITKVIHDDGTEEGLAQLTALQFETKQVDTVEDLVRETASLTPEDQTLLAPAWGGVAPT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC PSDDKLAAFPLQSKRDGEMSPIVIASPESGISAVATARAFGAEIRFMDYPDPRFNQEQMK CCCCCEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHH MVAGLADRPLLALGDQFGTGEQLAEKIKRGEEVTTELPGGGGLVFPGRRMVALYGHPSGP HHHCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCEECCCCEEEEEEECCCCC ALGALGEQPAAEAVARATDMAAQYQEFEDQPVIPAFEVIATVASEFAGDDGNYSNEFPVE CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH DLVGYVDAITEAGGYAVLDLQPGRANFLDQAKMYEELLKRPNVGLALDPEWKIGPDEQPM HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHH TRVGSADAAEINEVSQWLADLTAENDLPQKAFVLHQFQLEMLTNRDQINTDHLELAVVLH HHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE ADGHGNAGDKYATWNMLREGLSPNYFMAWKNFYDEDFPTFTPQQTYEEVDPRPWFVSYQ ECCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA